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A conformational study of the 10–23 DNAzyme via programmed DNA self-assembly

https://doi.org/10.1039/d2cc01144a
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What this work says

Outgoing claims: the papers this work cites, builds on, or argues with.

inferredcites →https://doi.org/10.1002/anie.200453779openalex-snapshot
An Autonomous DNA Nanomotor Powered by a DNA Enzyme
inferredcites →https://doi.org/10.1002/anie.200500703openalex-snapshot
A DNAzyme That Walks Processively and Autonomously along a One‐Dimensional Track
inferredcites →https://doi.org/10.1002/anie.200902662openalex-snapshot
Substrate‐Assisted Assembly of Interconnected Single‐Duplex DNA Nanostructures
inferredcites →https://doi.org/10.1002/anie.201005246openalex-snapshot
Amplified Detection of DNA through an Autocatalytic and Catabolic DNAzyme‐Mediated Process
inferredcites →https://doi.org/10.1002/anie.201411417openalex-snapshot
A Smart DNAzyme–MnO 2 Nanosystem for Efficient Gene Silencing
inferredcites →https://doi.org/10.1006/jmbi.2000.3826openalex-snapshot
Alternative conformations of a nucleic acid four-way junction
inferredcites →https://doi.org/10.1016/0022-5193(82)90002-9openalex-snapshot
Nucleic acid junctions and lattices
inferredcites →https://doi.org/10.1016/1074-5521(94)90014-0openalex-snapshot
A DNA enzyme that cleaves RNA
inferredcites →https://doi.org/10.1016/j.isci.2019.100815openalex-snapshot
Catalytic Nucleic Acids: Biochemistry, Chemical Biology, Biosensors, and Nanotechnology
inferredcites →https://doi.org/10.1016/j.jmb.2005.12.051openalex-snapshot
Indirect Readout of DNA Sequence at the Primary-kink Site in the CAP–DNA Complex: Recognition of Pyrimidine-Purine and Purine-Purine Steps
inferredcites →https://doi.org/10.1016/j.jmb.2009.05.022openalex-snapshot
Specificity and Affinity of Lac Repressor for the Auxiliary Operators O2 and O3 Are Explained by the Structures of Their Protein–DNA Complexes
inferredcites →https://doi.org/10.1016/s0079-6565(97)00023-xopenalex-snapshot
The use of NMR methods for conformational studies of nucleic acids
inferredcites →https://doi.org/10.1016/s1074-5521(00)00024-7openalex-snapshot
Atomic force microscopy of parallel DNA branched junction arrays
inferredcites →https://doi.org/10.1021/bi020001zopenalex-snapshot
Atomic Force Microscopic Measurement of the Interdomain Angle in Symmetric Holliday Junctions
inferredcites →https://doi.org/10.1021/bi9812221openalex-snapshot
Mechanism and Utility of an RNA-Cleaving DNA Enzyme
inferredcites →https://doi.org/10.1021/ja0021316openalex-snapshot
A Highly Sensitive and Selective Catalytic DNA Biosensor for Lead Ions
inferredcites →https://doi.org/10.1021/ja034775uopenalex-snapshot
A Colorimetric Lead Biosensor Using DNAzyme-Directed Assembly of Gold Nanoparticles
inferredcites →https://doi.org/10.1021/ja203693bopenalex-snapshot
A Ligation-Triggered DNAzyme Cascade for Amplified Fluorescence Detection of Biological Small Molecules with Zero-Background Signal
inferredcites →https://doi.org/10.1021/ja9900398openalex-snapshot
Designed Two-Dimensional DNA Holliday Junction Arrays Visualized by Atomic Force Microscopy
inferredcites →https://doi.org/10.1021/jacs.9b10272openalex-snapshot
ATP-Triggered, Allosteric Self-Assembly of DNA Nanostructures
inferredcites →https://doi.org/10.1021/la402326bopenalex-snapshot
Approaching the Limit: Can One DNA Strand Assemble into Defined Nanostructures?
inferredcites →https://doi.org/10.1021/nn300813wopenalex-snapshot
DNA Polyhedra with T-Linkage
inferredcites →https://doi.org/10.1038/375611a0openalex-snapshot
A DNA metalloenzyme with DNA ligase activity
inferredcites →https://doi.org/10.1038/376791a0openalex-snapshot
Structural basis for DNA bending by the architectural transcription factor LEF-1
inferredcites →https://doi.org/10.1038/5839openalex-snapshot
Crystal structure of an 82-nucleotide RNA-DNA complex formed by the 10-23 DNA enzyme.
inferredcites →https://doi.org/10.1038/nature01406openalex-snapshot
DNA in a material world
inferredcites →https://doi.org/10.1038/nbt896openalex-snapshot
FRET imaging
inferredcites →https://doi.org/10.1038/nnano.2013.257openalex-snapshot
A synthetic DNA motor that transports nanoparticles along carbon nanotubes
inferredcites →https://doi.org/10.1038/s41467-017-02203-xopenalex-snapshot
Crystal structure of an RNA-cleaving DNAzyme
inferredcites →https://doi.org/10.1038/s41467-019-12933-9openalex-snapshot
Active generation of nanoholes in DNA origami scaffolds for programmed catalysis in nanocavities
inferredcites →https://doi.org/10.1038/s41586-021-03951-zopenalex-snapshot
Mechanism for Cas4-assisted directional spacer acquisition in CRISPR–Cas
inferredcites →https://doi.org/10.1038/s41586-021-04030-zopenalex-snapshot
Target site selection and remodelling by type V CRISPR-transposon systems
inferredcites →https://doi.org/10.1038/s41586-021-04225-4openalex-snapshot
Time-resolved structural analysis of an RNA-cleaving DNA catalyst
inferredcites →https://doi.org/10.1039/b718428jopenalex-snapshot
DNAzymes for sensing, nanobiotechnology and logic gate applications
inferredcites →https://doi.org/10.1073/pnas.94.7.2843openalex-snapshot
The structure of a CAP–DNA complex having two cAMP molecules bound to each monomer
inferredcites →https://doi.org/10.1073/pnas.94.9.4262openalex-snapshot
A general purpose RNA-cleaving DNA enzyme
inferredcites →https://doi.org/10.1074/jbc.m102325200openalex-snapshot
DNAzymes to β1 and β3 mRNA Down-regulate Expression of the Targeted Integrins and Inhibit Endothelial Cell Capillary Tube Formation in Fibrin and Matrigel
inferredcites →https://doi.org/10.1111/febs.13307openalex-snapshot
DNA structure and function
inferredcites →https://doi.org/10.1126/science.1200752openalex-snapshot
Ribozyme-Catalyzed Transcription of an Active Ribozyme
inferredcites →https://doi.org/10.1126/science.271.5250.778openalex-snapshot
Intercalation, DNA Kinking, and the Control of Transcription
inferredcites →https://doi.org/10.1146/annurev.biochem.69.1.597openalex-snapshot
Ribozyme Structures and Mechanisms
inferredcites →https://doi.org/10.3390/ijms150712335openalex-snapshot
Making the Bend: DNA Tertiary Structure and Protein-DNA Interactions

What points at this work

Incoming claims: where this work appears in other papers’ reference lists and arguments.

inferred← citeshttps://doi.org/10.2139/ssrn.4778757openalex-extracted
Microscopic Insight into Self-Assembly of Amphiphilic Peptides: The Influence of the Hydrophilic Residues
inferred← citeshttps://doi.org/10.1111/febs.16698openalex-snapshot
The architecture of the 10‐23 DNA zyme and its implications for DNA ‐mediated catalysis
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