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A model of the large-scale organization of chromatin

https://doi.org/10.1042/bst20120238
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What this work says

Outgoing claims: the papers this work cites, builds on, or argues with.

inferredcites →https://doi.org/10.1016/0032-3861(81)90183-xopenalex-snapshot
Scaling concepts in polymer physics
inferredcites →https://doi.org/10.1016/j.bpj.2008.12.3919openalex-snapshot
Thermodynamic Pathways to Genome Spatial Organization in the Cell Nucleus
inferredcites →https://doi.org/10.1016/j.gde.2007.08.008openalex-snapshot
Functional organisation of the genome during interphase
inferredcites →https://doi.org/10.1038/nature11082openalex-snapshot
Topological domains in mammalian genomes identified by analysis of chromatin interactions
inferredcites →https://doi.org/10.1038/nbt.2057openalex-snapshot
Genome architectures revealed by tethered chromosome conformation capture and population-based modeling
inferredcites →https://doi.org/10.1038/nrg2041openalex-snapshot
Dynamic genome architecture in the nuclear space: regulation of gene expression in three dimensions
inferredcites →https://doi.org/10.1063/1.2914118openalex-snapshot
Scaling Concepts in Polymer Physics
inferredcites →https://doi.org/10.1073/pnas.0809501106openalex-snapshot
Spatially confined folding of chromatin in the interphase nucleus
inferredcites →https://doi.org/10.1073/pnas.1204799109openalex-snapshot
Complexity of chromatin folding is captured by the strings and binders switch model
inferredcites →https://doi.org/10.1103/physrevlett.86.4378openalex-snapshot
Creep of Superconducting Vortices in the Limit of Vanishing Temperature: A Fingerprint of Off-Equilibrium Dynamics
inferredcites →https://doi.org/10.1103/physrevlett.98.108104openalex-snapshot
Symmetry-Breaking Model for X -Chromosome Inactivation
inferredcites →https://doi.org/10.1126/science.1181369openalex-snapshot
Comprehensive Mapping of Long-Range Interactions Reveals Folding Principles of the Human Genome
inferredcites →https://doi.org/10.1143/ptps.191.40openalex-snapshot
Mean-Field Theory of the Symmetry Breaking Model for X Chromosome Inactivation
inferredcites →https://doi.org/10.1209/epl/i1998-00402-xopenalex-snapshot
Segregation of granular mixtures in the presence of compaction
inferredcites →https://doi.org/10.1209/epl/i2004-10015-yopenalex-snapshot
Glass transition in granular media
inferredcites →https://doi.org/10.1371/journal.pcbi.1002229openalex-snapshot
Conformation Regulation of the X Chromosome Inactivation Center: A Model
inferredcites →https://doi.org/10.17877/de290r-1836openalex-snapshot
Creep of Superconducting Vortices in the Limit of Vanishing Temperature

What points at this work

Incoming claims: where this work appears in other papers’ reference lists and arguments.

inferred← citeshttps://doi.org/10.2139/ssrn.3748592openalex-extracted
inferred← citeshttps://doi.org/10.1007/978-3-319-26587-2_169-1openalex-snapshot
Nucleus, Nuclear Structure, and Nuclear Functional Changes in Liver Cancer
inferred← citeshttps://doi.org/10.1007/978-3-319-26956-6_169openalex-snapshot
Nucleus, Nuclear Structure, and Nuclear Functional Changes in Liver Cancer
inferred← citeshttps://doi.org/10.1007/978-3-319-38882-3_16openalex-snapshot
Mapping and Visualizing Spatial Genome Organization
inferred← citeshttps://doi.org/10.1016/j.cell.2013.09.051openalex-snapshot
Chromosomal Contact Permits Transcription between Coregulated Genes
inferred← citeshttps://doi.org/10.1016/j.febslet.2015.05.012openalex-snapshot
Restraint‐based three‐dimensional modeling of genomes and genomic domains
inferred← citeshttps://doi.org/10.1016/j.isci.2021.102408openalex-snapshot
DNA Sequence-Directed Cooperation between Nucleoid-Associated Proteins
inferred← citeshttps://doi.org/10.1038/nsmb.3402openalex-snapshot
Active and poised promoter states drive folding of the extended HoxB locus in mouse embryonic stem cells
inferred← citeshttps://doi.org/10.1038/s41580-021-00362-wopenalex-snapshot
Understanding 3D genome organization by multidisciplinary methods
inferred← citeshttps://doi.org/10.1038/s41588-018-0236-3openalex-snapshot
Challenges and guidelines toward 4D nucleome data and model standards
inferred← citeshttps://doi.org/10.1039/c4sm02434fopenalex-snapshot
Combined collapse by bridging and self-adhesion in a prototypical polymer model inspired by the bacterial nucleoid
inferred← citeshttps://doi.org/10.1042/bst20130006openalex-snapshot
Topological Aspects of DNA Function and Protein Folding
inferred← citeshttps://doi.org/10.1083/jcb.201806052openalex-snapshot
Interchromosomal interactions: A genomic love story of kissing chromosomes
inferred← citeshttps://doi.org/10.1093/bioinformatics/btv754openalex-snapshot
MOGEN: a tool for reconstructing 3D models of genomes from chromosomal conformation capturing data
inferred← citeshttps://doi.org/10.1093/nar/gkw1155openalex-snapshot
3D genome structure modeling by Lorentzian objective function
inferred← citeshttps://doi.org/10.1186/s12575-019-0094-0openalex-snapshot
An Overview of Methods for Reconstructing 3-D Chromosome and Genome Structures from Hi-C Data
inferred← citeshttps://doi.org/10.1186/s13059-015-0768-0openalex-snapshot
Chromatin interaction analysis reveals changes in small chromosome and telomere clustering between epithelial and breast cancer cells
inferred← citeshttps://doi.org/10.32469/10355/70076openalex-snapshot
Data mining and machine learning methods for chromosome conformation data analysis
inferred← citeshttps://doi.org/10.3389/fmicb.2015.00424openalex-snapshot
The nucleoid as a smart polymer
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