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Use of retrotransposon-derived genetic markers to analyse genomic variability in plants
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1 of the 107 references listed on this page is in the Retraction Watch database as retracted (export 2026-10-28): 10.1038/s41598-017-06084-4 (notice 2020-09-22).
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What this work says
Outgoing claims: the papers this work cites, builds on, or argues with.
inferredcites →https://doi.org/10.1007/bf02174388openalex-snapshotTheTy1-copia group retrotransposons inVicia species: copy number, sequence heterogeneity and chromosomal localisation
inferredcites →https://doi.org/10.1007/pl00008630openalex-snapshotPolymorphism of insertion sites of Ty1-copia class retrotransposons and its use for linkage and diversity analysis in pea
inferredcites →https://doi.org/10.1007/s00122-014-2422-8openalex-snapshotDevelopment of IRAP- and REMAP-derived SCAR markers for marker-assisted selection of the stripe rust resistance gene Yr15 derived from wild emmer wheat
inferredcites →https://doi.org/10.1007/s00438-014-0914-5openalex-snapshotPrediction of retrotransposons and assessment of genetic variability based on developed retrotransposon-based insertion polymorphism (RBIP) markers in Pyrus L
inferredcites →https://doi.org/10.1007/s004380050372openalex-snapshotGenetic distribution of Bare–1-like retrotransposable elements in the barley genome revealed by sequence-specific amplification polymorphisms (S-SAP)
inferredcites →https://doi.org/10.1007/s00439-012-1165-3openalex-snapshotGenomic rearrangements at the FRA2H common fragile site frequently involve non-homologous recombination events across LTR and L1(LINE) repeats
inferredcites →https://doi.org/10.1007/s12298-017-0446-7openalex-snapshotAssessment of genetic diversity and population structure of an endemic Moroccan tree (Argania spinosa L.) based in IRAP and ISSR markers and implications for conservation
inferredcites →https://doi.org/10.1007/s13258-017-0619-3openalex-snapshotTy3/Gypsy retrotransposons in the Pacific abalone Haliotis discus hannai: characterization and use for species identification in the genus Haliotis
inferredcites →https://doi.org/10.1007/s13258-018-0655-7openalex-snapshotRetrotransposons in Betula nana, and interspecific relationships in the Betuloideae, based on inter-retrotransposon amplified polymorphism (IRAP) markers
inferredcites →https://doi.org/10.1016/j.ympev.2015.03.009openalex-snapshotA survey of transposable element classification systems – A call for a fundamental update to meet the challenge of their diversity and complexity
inferredcites →https://doi.org/10.1023/a:1014831511810openalex-snapshotA high-density cytogenetic map of the Aegilops tauschii genome incorporating retrotransposons and defense-related genes: insights into cereal chromosome structure and function
inferredcites →https://doi.org/10.1038/hdy.2009.45openalex-snapshotEvolutionary conserved lineage of Angela-family retrotransposons as a genome-wide microsatellite repeat dispersal agent
inferredcites →https://doi.org/10.1038/s41598-017-06084-4openalex-snapshotRETRACTED ARTICLE: Comparison of traditional and new generation DNA markers declares high genetic diversity and differentiated population structure of wild almond species
inferredcites →https://doi.org/10.1073/pnas.110587497openalex-snapshotGenome evolution of wild barley ( Hordeum spontaneum ) by BARE -1 retrotransposon dynamics in response to sharp microclimatic divergence
inferredcites →https://doi.org/10.1093/dnares/dsu015openalex-snapshotEfficient DNA Fingerprinting Based on the Targeted Sequencing of Active Retrotransposon Insertion Sites Using a Bench-Top High-Throughput Sequencing Platform
inferredcites →https://doi.org/10.1093/gbe/evw243openalex-snapshotLINEs between Species: Evolutionary Dynamics of LINE-1 Retrotransposons across the Eukaryotic Tree of Life
inferredcites →https://doi.org/10.1093/genetics/54.2.595openalex-snapshotA MOLECULAR APPROACH TO THE STUDY OF GENIC HETEROZYGOSITY IN NATURAL POPULATIONS. II. AMOUNT OF VARIATION AND DEGREE OF HETEROZYGOSITY IN NATURAL POPULATIONS OF DROSOPHILA PSEUDOOBSCURA
inferredcites →https://doi.org/10.1093/nar/gkx1150openalex-snapshotDiversity-generating retroelements: natural variation, classification and evolution inferred from a large-scale genomic survey
inferredcites →https://doi.org/10.1101/gr.193301openalex-snapshotEnvelope -Class Retrovirus-Like Elements Are Widespread, Transcribed and Spliced, and Insertionally Polymorphic in Plants
inferredcites →https://doi.org/10.1101/gr.6214107openalex-snapshotGenome-wide comparative analysis of copia retrotransposons in Triticeae, rice, and Arabidopsis reveals conserved ancient evolutionary lineages and distinct dynamics of individual copia families
inferredcites →https://doi.org/10.1104/pp.113.216481openalex-snapshotThe Initiation of Epigenetic Silencing of Active Transposable Elements Is Triggered by RDR6 and 21-22 Nucleotide Small Interfering RNAs
inferredcites →https://doi.org/10.1105/tpc.16.00718openalex-snapshotExogenous Transposable Elements Circumvent Identity-Based Silencing, Permitting the Dissection of Expression-Dependent Silencing
inferredcites →https://doi.org/10.1111/tpj.12285openalex-snapshotGenome‐wide analysis of short interspersed nuclear elements SINES revealed high sequence conservation, gene association and retrotranspositional activity in wheat
inferredcites →https://doi.org/10.1111/tpj.13481openalex-snapshotTransposable elements ( TE s) contribute to stress‐related long intergenic noncoding RNA s in plants
inferredcites →https://doi.org/10.1139/g06-074openalex-snapshotRetrotransposon-based S-SAP as a platform for the analysis of genetic variation and linkage in globe artichoke
inferredcites →https://doi.org/10.1139/g06-119openalex-snapshotMapping of major spot-type and net-type net-blotch resistance genes in the Ethiopian barley line CI 9819
inferredcites →https://doi.org/10.1139/gen-2014-0031openalex-snapshotEfficient screening of long terminal repeat retrotransposons that show high insertion polymorphism via high-throughput sequencing of the primer binding site
inferredcites →https://doi.org/10.1186/1471-2148-10-44openalex-snapshotThe genetic diversity and evolution of field pea (Pisum) studied by high throughput retrotransposon based insertion polymorphism (RBIP) marker analysis
inferredcites →https://doi.org/10.1186/1759-8753-1-6openalex-snapshotTransposable elements in a marginal plant population: temporal fluctuations provide new insights into genome evolution of wild diploid wheat
inferredcites →https://doi.org/10.1186/s12870-017-1223-zopenalex-snapshotGenomic abundance and transcriptional activity of diverse gypsy and copia long terminal repeat retrotransposons in three wild sunflower species
inferredcites →https://doi.org/10.2144/000113655openalex-snapshotAdaptation of the AFLP technique as a new tool to detect genetic instability and transposition in interspecific hybrids
inferredcites →https://doi.org/10.4161/mge.34394openalex-snapshotInterspecific hybridization as a genomic stressor inducing mobilization of transposable elements inDrosophila
What points at this work
Incoming claims: where this work appears in other papers’ reference lists and arguments.
inferred← citeshttps://doi.org/10.1016/j.phytochem.2020.112330zenodo-depositor-declaredEfficiency of RAPD, ISSR, iPBS, SCoT and phytochemical markers in the genetic relationship study of five native and economical important bamboos of North-East India
inferred← citeshttps://doi.org/10.1002/ece3.7095openalex-snapshotRetrotransposon‐based genetic diversity of Deschampsia antarctica Desv. from King George Island (Maritime Antarctic)
inferred← citeshttps://doi.org/10.1016/j.cytogfr.2019.10.001openalex-snapshotRetrotransposons shuttling genetic and epigenetic information from the nuclear to the mitochondrial compartment: Do they play a pathogenetic role in scleroderma?
inferred← citeshttps://doi.org/10.1016/j.scienta.2020.109753openalex-snapshotRetrotransposon-based genetic variation and population structure of Impatiens macrovexilla Y. L. Chen in natural habitats and the implications for breeding
inferred← citeshttps://doi.org/10.1111/pbr.12960openalex-snapshotComparative assessment of microsatellite and retrotransposon‐based markers for genetic characterization of commercial banana cultivars (Musa spp.)
inferred← citeshttps://doi.org/10.1186/s13100-021-00248-wopenalex-snapshotA 192 bp ERV fragment insertion in the first intron of porcine TLR6 may act as an enhancer associated with the increased expressions of TLR6 and TLR1
inferred← citeshttps://doi.org/10.17557/tjfc.834403openalex-snapshotPOPULATION STRUCTURE AND LINKAGE DISEQUILIBRIUM ANALYSES OF MODEL PLANT Brachypodium distachion THROUGH iPBS MARKERS
inferred← citeshttps://doi.org/10.3390/agronomy12071510openalex-snapshotDevelopment of Retrotransposon-Based Molecular Markers for Characterization of Persea americana (Avocado) Cultivars and Horticultural Races
inferred← citeshttps://doi.org/10.3390/biotech10040023openalex-snapshotPrimer Binding Site (PBS) Profiling of Genetic Diversity of Natural Populations of Endemic Species Allium ledebourianum Schult.
inferred← citeshttps://doi.org/10.3390/f11010031openalex-snapshotDevelopment and Deployment of High-Throughput Retrotransposon-Based Markers Reveal Genetic Diversity and Population Structure of Asian Bamboo
inferred← citeshttps://doi.org/10.3390/jof7030234openalex-snapshotGenetic Diversity and Pathogenicity of Rhizoctonia spp. Isolates Associated with Red Cabbage in Samsun (Turkey)
inferred← citeshttps://doi.org/10.5219/1353openalex-snapshotDifferences between microbiota, phytochemical, antioxidant profile and dna fingerprinting of cabernet sauvignon grape from Slovakia and Macedonia
inferred← citeshttps://doi.org/10.6084/m9.figshare.15253485openalex-snapshotAdditional file 1 of A 192 bp ERV fragment insertion in the first intron of porcine TLR6 may act as an enhancer associated with the increased expressions of TLR6 and TLR1
inferred← citeshttps://doi.org/10.7287/peerj.11702v0.1/reviews/1openalex-snapshotPeer Review #1 of "Genetic analysis and population structure of wild and cultivated wishbone flower (Torenia fournieri Lind.) lines related to specific floral color (v0.1)"
inferred← citeshttps://doi.org/10.7287/peerj.11702v0.1/reviews/2openalex-snapshotPeer Review #2 of "Genetic analysis and population structure of wild and cultivated wishbone flower (Torenia fournieri Lind.) lines related to specific floral color (v0.1)"
inferred← citeshttps://doi.org/10.7287/peerj.11702v0.1/reviews/3openalex-snapshotPeer Review #3 of "Genetic analysis and population structure of wild and cultivated wishbone flower (Torenia fournieri Lind.) lines related to specific floral color (v0.1)"
inferred← citeshttps://doi.org/10.7717/peerj.10674openalex-snapshotDNA profiling and assessment of genetic diversity of relict speciesAllium altaicumPall. on the territory of Altai
inferred← citeshttps://doi.org/10.7717/peerj.11702openalex-snapshotGenetic analysis and population structure of wild and cultivated wishbone flower ( Torenia fournieri Lind.) lines related to specific floral color
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