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Species, ESUs or populations? Delimiting and describing morphologically cryptic diversity in Australian desert spring amphipods

https://doi.org/10.1071/is14036
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What this work says

Outgoing claims: the papers this work cites, builds on, or argues with.

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Integrating DNA barcode data and taxonomic practice: Determination, discovery, and description
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Four desert waters: Setting arid zone wetland conservation priorities through understanding patterns of endemism
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Implications of different species concepts for conserving biodiversity
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Coalescent-based species delimitation in an integrative taxonomy
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Extraordinary micro-endemism in Australian desert spring amphipods
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Need morphology always be required for new species descriptions?
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Protecting the innocent: studying short-range endemic taxa enhances conservation outcomes
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Molecular phylogenetic, morphological and biogeographic evidence for a new genus of parabathynellid crustaceans (Syncarida : Bathynellacea) from groundwater in an ancient southern Australian landscape
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Groundwater-dependent ecosystems and the dangers of groundwater overdraft: a review and an Australian perspective
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Bayesian species delimitation using multilocus sequence data
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Sequence-Based Species Delimitation for the DNA Taxonomy of Undescribed Insects
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Alleviating the taxonomic impediment of DNA barcoding and setting a bad precedent: names for ten species of ‘ Astraptes fulgerator ’ (Lepidoptera: Hesperiidae: Eudaminae) with DNA-based diagnoses
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The Discovery of Single-Nucleotide Polymorphisms—and Inferences about Human Demographic History
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A Comparison of Bayesian Methods for Haplotype Reconstruction from Population Genotype Data
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DnaSP v5: a software for comprehensive analysis of DNA polymorphism data
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jModelTest: Phylogenetic Model Averaging
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Bayesian Inference of Species Trees from Multilocus Data
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PCR-based assays of mendelian polymorphisms from anonymous single-copy nuclear DNA: techniques and applications for population genetics.
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Can mtDNA Barcodes Be Used to Delimit Species? A Response to Pons et al. (2006)
inferredcites →https://doi.org/10.1093/sysbio/syq010openalex-snapshot
New Algorithms and Methods to Estimate Maximum-Likelihood Phylogenies: Assessing the Performance of PhyML 3.0
inferredcites →https://doi.org/10.1093/sysbio/syr061openalex-snapshot
Analysis of Ratios in Multivariate Morphometry
inferredcites →https://doi.org/10.1098/rspb.2010.0662openalex-snapshot
Bayesian species delimitation in West African forest geckos (Hemidactylus fasciatus)
inferredcites →https://doi.org/10.1111/(issn)1095-8312openalex-snapshot
Biological Journal of the Linnean Society
inferredcites →https://doi.org/10.1111/fwb.12293openalex-snapshot
Persistence in the desert: ephemeral waterways and small‐scale gene flow in the desert spring amphipod, W angiannachiltonia guzikae
inferredcites →https://doi.org/10.1111/j.0014-3820.2003.tb01523.xopenalex-snapshot
EVOLUTION OF SUBTERRANEAN DIVING BEETLES (COLEOPTERA: DYTISCIDAE HYDROPORINI, BIDESSINI) IN THE ARID ZONE OF AUSTRALIA
inferredcites →https://doi.org/10.1111/j.1095-8312.1995.tb01110.xopenalex-snapshot
Genetic differentiation of aquatic snails (Gastropoda: Hydrobiidae) from artesian springs in arid Australia
inferredcites →https://doi.org/10.1111/j.1095-8312.2005.00503.xopenalex-snapshot
Towards integrative taxonomy
inferredcites →https://doi.org/10.1111/j.1365-294x.2007.03261.xopenalex-snapshot
Subterranean archipelago in the Australian arid zone: mitochondrial DNA phylogeography of amphipods from central Western Australia
inferredcites →https://doi.org/10.1111/j.1365-294x.2008.04007.xopenalex-snapshot
Independent colonization and extensive cryptic speciation of freshwater amphipods in the isolated groundwater springs of Australia's Great Artesian Basin
inferredcites →https://doi.org/10.1111/j.1365-294x.2010.04759.xopenalex-snapshot
Evolution in caves: Darwin’s ‘wrecks of ancient life’ in the molecular era
inferredcites →https://doi.org/10.1111/j.1753-4887.1981.tb06752.xopenalex-snapshot
Proceedings of the National Academy of Sciences of the United States of America
inferredcites →https://doi.org/10.1111/mec.12413openalex-snapshot
How to fail at species delimitation
inferredcites →https://doi.org/10.1128/aem.67.10.4399-4406.2001openalex-snapshot
Counting the Uncountable: Statistical Approaches to Estimating Microbial Diversity
inferredcites →https://doi.org/10.1142/9789814401241_0003openalex-snapshot
MOLECULAR BIOLOGY AND EVOLUTION
inferredcites →https://doi.org/10.1163/193724012x626566openalex-snapshot
Divergent molecular lineages and not-so-cryptic species: the first descriptions of stygobitic chiltoniid amphipods (Talitroidea: Chiltoniidae) from Western Australia
inferredcites →https://doi.org/10.11646/zootaxa.2293.1.2openalex-snapshot
Two new genera and species of chiltoniid amphipods (Crustacea: Amphipoda: Talitroidea) from freshwater mound springs in South Australia
inferredcites →https://doi.org/10.11646/zootaxa.2742.1.5openalex-snapshot
Taxonomy and the DNA Barcoding Enterprise
inferredcites →https://doi.org/10.1186/1742-9994-10-59openalex-snapshot
How to describe a cryptic species? Practical challenges of molecular taxonomy
inferredcites →https://doi.org/10.1371/journal.pone.0037642openalex-snapshot
Desert Springs: Deep Phylogeographic Structure in an Ancient Endemic Crustacean (Phreatomerus latipes)

What points at this work

Incoming claims: where this work appears in other papers’ reference lists and arguments.

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From order to species: Modelling Amphipoda distributions in the Hamersley Range
inferred← citeshttps://doi.org/10.1002/ece3.2535openalex-snapshot
Trapped in the web of water: Groundwater‐fed springs are island‐like ecosystems for the meiofauna
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Terrestrial and Inland-water Invertebrates of the Australian Arid Zone
inferred← citeshttps://doi.org/10.1007/s10592-017-1027-6openalex-snapshot
Riverscape genetics identifies speckled dace (Rhinichthys osculus) cryptic diversity in the Klamath–Trinity Basin
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An identity crisis in the Indo-Pacific: molecular exploration of the genus Koseiria (Digenea: Enenteridae)
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Micro-endemic species of snails and amphipods show population genetic structure across very small geographic ranges
inferred← citeshttps://doi.org/10.1038/s41598-020-73739-0openalex-snapshot
Continental-scale patterns of hyper-cryptic diversity within the freshwater model taxon Gammarus fossarum (Crustacea, Amphipoda)
inferred← citeshttps://doi.org/10.1071/is15024openalex-snapshot
Refugia within refugia: in situ speciation and conservation of threatened Bertmainius (Araneae : Migidae), a new genus of relictual trapdoor spiders endemic to the mesic zone of south-western Australia
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Understanding subterranean variability: the first genus of Bathynellidae (Bathynellacea, Crustacea) from Western Australia described through a morphological and multigene approach
inferred← citeshttps://doi.org/10.1071/is18070openalex-snapshot
Molecular phylogenetic analysis of Australian arid-zone oniscidean isopods (Crustacea : Haloniscus) reveals strong regional endemicity and new putative species
inferred← citeshttps://doi.org/10.1071/is19071openalex-snapshot
Systematics of the Peripatopsis clavigera species complex (Onychophora : Peripatopsidae) reveals cryptic cladogenic patterning, with the description of five new species
inferred← citeshttps://doi.org/10.1071/is21041openalex-snapshot
Cryptic diversity down under: defining species in the subterranean amphipod genus Nedsia Barnard & Williams, 1995 (Hadzioidea: Eriopisidae) from the Pilbara, Western Australia
inferred← citeshttps://doi.org/10.1080/14772000.2021.1884622openalex-snapshot
The Aegean Archipelago as cradle: divergence of the glaphyrid genusPygopleurusand phylogeography ofP. foina
inferred← citeshttps://doi.org/10.1093/iob/obae010openalex-snapshot
Morphological Species Delimitation in The Western Pond Turtle (Actinemys): Can Machine Learning Methods Aid in Cryptic Species Identification?
inferred← citeshttps://doi.org/10.1093/jcbiol/ruz044openalex-snapshot
Systematics of Haloniscus Chilton, 1920 (Isopoda: Oniscidea: Philosciidae), with description of four new species from threatened Great Artesian Basin springs in South Australia
inferred← citeshttps://doi.org/10.1093/sysbio/syw098openalex-snapshot
Biodiversity and the Species Concept—Lineages are not Enough
inferred← citeshttps://doi.org/10.1093/zoolinnean/zlaa099openalex-snapshot
Addressing the Linnean shortfall in a cryptic species complex
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Arid zone island hopping: the impact of dispersal on endemism in hydraenid beetles (Coleoptera: Hydraenidae) found in isolated desert springs
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Trouble at the top? Restricted distribution and extreme population isolation in an alpine crustacean assemblage with unexpected lineage diversity
inferred← citeshttps://doi.org/10.1111/ivb.12348openalex-snapshot
Barcoding of South African forest‐dwelling snails (Mollusca: Gastropoda) reveals widespread cryptic diversity
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Cryptic species as a window into the paradigm shift of the species concept
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The future of nemertean taxonomy (phylum Nemertea) — a proposal
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The giant cryptic amphipod species of the subterranean genus Niphargus (Crustacea, Amphipoda)
inferred← citeshttps://doi.org/10.1111/zsc.12253openalex-snapshot
External diversity is restrained by internal conservatism: New nudibranch mollusc contributes to the cryptic species problem
inferred← citeshttps://doi.org/10.11606/t.41.2022.tde-09062022-173135openalex-snapshot
Nemertopsis bivittata (Hoplonemertea), Lineus sanguineus (Heteronemertea) e Perinereis ponteni (Polychaeta): validade das espécies, fluxo gênico e diversidade genética na costa brasileira
inferred← citeshttps://doi.org/10.1186/s12862-023-02191-1openalex-snapshot
Genetic approaches reveal a healthy population and an unexpectedly recent origin for an isolated desert spring fish
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Time capsules of biodiversity: Future research directions for groundwater-dependent ecosystems of the Great Artesian Basin
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Genetic Diversity and Conservation Units: Dealing With the Species-Population Continuum in the Age of Genomics
inferred← citeshttps://doi.org/10.3390/d16100650openalex-snapshot
Diversity and Distribution of Australian Stygobiont and Other Groundwater-Associated Amphipods (Crustacea: Malacostraca: Peracarida)
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Current State and Reassessment of Threatened Species Status of Invertebrates Endemic to Great Artesian Basin Springs
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Springs of the Great Artesian Basin – Knowledge Gaps and Future Directions for Research, Management and Conservation
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