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Phylogeny of Stenopodidea (Crustacea : Decapoda) shrimps inferred from nuclear and mitochondrial genes reveals non-monophyly of the families Spongicolidae and Stenopididae and most of their composite genera

https://doi.org/10.1071/is16024
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What this work says

Outgoing claims: the papers this work cites, builds on, or argues with.

inferredcites →https://doi.org/10.1007/978-94-015-3641-7_8openalex-snapshot
Natural History Research
inferredcites →https://doi.org/10.1016/j.jcz.2011.04.003openalex-snapshot
Molecular systematics of caridean shrimps based on five nuclear genes: Implications for superfamily classification
inferredcites →https://doi.org/10.1016/j.margen.2011.11.002openalex-snapshot
Complete mitochondrial DNA sequence of Stenopus hispidus (Crustacea: Decapoda: Stenopodidea) and a novel tRNA gene cluster
inferredcites →https://doi.org/10.1016/j.ympev.2008.04.009openalex-snapshot
Phylogeny of Decapoda using two nuclear protein-coding genes: Origin and evolution of the Reptantia
inferredcites →https://doi.org/10.1016/j.ympev.2009.05.019openalex-snapshot
Phylogeny of penaeoid shrimps (Decapoda: Penaeoidea) inferred from nuclear protein-coding genes
inferredcites →https://doi.org/10.1017/s002531540300688xhopenalex-snapshot
Phylogeny of the family Spongicolidae (Crustacea: Stenopodidea): evolutionary trend from shallow-water free-living to deep-water sponge-associated habitat
inferredcites →https://doi.org/10.1038/nmeth.2109openalex-snapshot
jModelTest 2: more models, new heuristics and parallel computing
inferredcites →https://doi.org/10.1071/zo98048openalex-snapshot
Histone H3 and U2 snRNA DNA sequences and arthropod molecular evolution
inferredcites →https://doi.org/10.1080/00222939200770051openalex-snapshot
A new species ofStenopusfrom Australia, with a redescription ofStenopus cyanoscelis(Crustacea: Decapoda: Stenopodidea)
inferredcites →https://doi.org/10.1080/02541858.1990.11448223openalex-snapshot
On the occurrence ofStenopus tenuirostrisDe Man, 1888 in Natal waters
inferredcites →https://doi.org/10.1080/10635150290069913openalex-snapshot
An Approximately Unbiased Test of Phylogenetic Tree Selection
inferredcites →https://doi.org/10.1080/17451000.2012.745004openalex-snapshot
Description of a new deep-water stenopodid shrimp of the genusOdontozonaHolthuis, 1946 (Crustacea, Decapoda) from Brazil
inferredcites →https://doi.org/10.1093/bioinformatics/17.12.1246openalex-snapshot
CONSEL: for assessing the confidence of phylogenetic tree selection
inferredcites →https://doi.org/10.1093/bioinformatics/btu033openalex-snapshot
RAxML version 8: a tool for phylogenetic analysis and post-analysis of large phylogenies
inferredcites →https://doi.org/10.1093/molbev/msu068openalex-snapshot
Evolutionary History of True Crabs (Crustacea: Decapoda: Brachyura) and the Origin of Freshwater Crabs
inferredcites →https://doi.org/10.1093/nar/gkh340openalex-snapshot
MUSCLE: multiple sequence alignment with high accuracy and high throughput
inferredcites →https://doi.org/10.1093/sysbio/sys029openalex-snapshot
MrBayes 3.2: Efficient Bayesian Phylogenetic Inference and Model Choice Across a Large Model Space
inferredcites →https://doi.org/10.1111/j.1463-6409.2009.00410.xopenalex-snapshot
Phylogenetic position, systematic status, and divergence time of the Procarididea (Crustacea: Decapoda)
inferredcites →https://doi.org/10.1111/j.1463-6409.2011.00483.xopenalex-snapshot
Refuting the six‐genus classification of Penaeus s.l. (Dendrobranchiata, Penaeidae): a combined analysis of mitochondrial and nuclear genes
inferredcites →https://doi.org/10.1163/156854002760095471openalex-snapshot
A new deep water species of Odontozona Holthuis (Decapoda, Stenopodidae) from the southern Gulf of California, Mexico
inferredcites →https://doi.org/10.1163/156854073x00803openalex-snapshot
Spongiocaris, a New Genus of Stenopodidean Shrimp From New Zealand and South African Waters, With a Description of Two New Species (Decapoda Natantia, Stenopodidea)
inferredcites →https://doi.org/10.1163/156854076x00837openalex-snapshot
Studies On Indo-West Pacific Stenopodidea, 1. Stenopus Zanzibaricus Sp. Nov., a New Species From East Africa
inferredcites →https://doi.org/10.1163/193724090x00195openalex-snapshot
MOLECULAR PHYLOGENY OF SELECTED DECAPOD CRUSTACEANS BASED ON 18S rRNA NUCLEOTIDE SEQUENCES
inferredcites →https://doi.org/10.1163/1937240x-00002310openalex-snapshot
New species of Globospongicola Komai and Saito, 2006 (Decapoda: Stenopodidea: Spongicolidae) from the South China Sea with discussion of its phylogenetic position
inferredcites →https://doi.org/10.11646/zootaxa.2154.1.2openalex-snapshot
Two new species of Richardina A. Milne-Edwards, 1881 (Crustacea: Decapoda: Stenopodidea: Stenopodidae), representing the first occurrences of the genus from the Pacific
inferredcites →https://doi.org/10.11646/zootaxa.2372.1.21openalex-snapshot
A review of the genus Engystenopus (Crustacea: Decapoda: Stenopodidea) Juxtastenopus, gen. nov. , a new combination for E. spinulatus Holthuis, 1946, and transfer of E. palmipes Alcock & Anderson, 1894 to the family Spongicolidae Schram, 1986
inferredcites →https://doi.org/10.11646/zootaxa.2676.1.4openalex-snapshot
A new classification of the Galatheoidea (Crustacea: Decapoda: Anomura)
inferredcites →https://doi.org/10.11646/zootaxa.3630.3.4openalex-snapshot
Redescription of Microprosthema semilaeve (von Martens, 1872) (Decapoda: Stenopodidea: Spongicolidae) and description of a new species of Microprosthema from Dry Tortugas, Florida
inferredcites →https://doi.org/10.11646/zootaxa.3774.6.4openalex-snapshot
Redescription of Odontozona edwardsi (Bouvier, 1908) (Decapoda: Stenopodidea: Stenopodidae) and description of a new species of Odontozona commensal on the deep-water coral, Lophelia pertusa (Linneaus, 1758)
inferredcites →https://doi.org/10.11646/zootaxa.3857.2.2openalex-snapshot
Two new species and new records of Microprosthema Stimpson, 1860 (Crustacea: Decapoda: Stenopodidea: Spongicolidae) from the Indo-West Pacific
inferredcites →https://doi.org/10.11646/zootaxa.4044.3.1openalex-snapshot
Stenopodidean shrimps (Crustacea: Decapoda) from New Caledonian waters
inferredcites →https://doi.org/10.11646/zootaxa.4072.5.5openalex-snapshot
Globospongicola jiaolongi Jiang, Kou & Li, 2015, a junior subjective synonym of G. spinulatus Komai & Saito, 2006 (Crustacea: Decapoda: Stenopodidea: Spongicolidae)
inferredcites →https://doi.org/10.11646/zootaxa.4111.4.5openalex-snapshot
Two new species of the stenopodidean shrimp genus Spongiocaris Bruce & Baba, 1973 (Crustacea: Decapoda: Spongicolidae) from the Indo-West Pacific
inferredcites →https://doi.org/10.12782/sd.20.1.029openalex-snapshot
A New Species of the Stenopodidean Shrimp Genus Spongicola (Crustacea: Decapoda: Spongicolidae) from French Polynesia, South Pacific
inferredcites →https://doi.org/10.1651/c-2658.1openalex-snapshot
Macromaxillocarididae, a New Family of Stenopodidean Shrimp from an Anchialine Cave in the Bahamas, with the Description of Macromaxillocaris Bahamaensis, N. Gen., N. Sp.
inferredcites →https://doi.org/10.2307/1548664openalex-snapshot
Molecular Phylogeny of Selected Decapod Crustaceans Based on 18s rRNA Nucleotide Sequences
inferredcites →https://doi.org/10.2307/1549108openalex-snapshot
Spongiocaris hexactinellicola, a New Species of Stenopodidean Shrimp (Decapoda: Stenopodidae) Associated with Hexactinellid Sponges from Tartar Bank, Bahamas
inferredcites →https://doi.org/10.2988/pbswopenalex-snapshot
Proceedings of the Biological Society of Washington
inferredcites →https://doi.org/10.3897/asp.67.e31691openalex-snapshot
The Decapod Tree of Life: Compiling the Data and Moving toward a Consensus of Decapod Evolution
inferredcites →https://doi.org/10.5281/zenodo.13656216openalex-snapshot
Stenopus pyrsonotus New species Of Stenopodidean Shrimp From The Indo West Pacific Region Crustacea Decapoda
inferredcites →https://doi.org/10.5281/zenodo.5394684openalex-snapshot
A review of species of the genera Spongicola de Haan, 1844 and Paraspongicola de Saint Laurent & Cleva, 1981 (Crustacea, Decapoda, Stenopodidea, Spongicolidae)

What points at this work

Incoming claims: where this work appears in other papers’ reference lists and arguments.

inferred← citeshttps://doi.org/10.11646/zootaxa.4276.3.5zenodo-depositor-declared
A new species of Odontozona Holthuis, 1946 (Crustacea: Decapoda: Stenopodidea: Stenopodidae) from the Caribbean Sea
inferred← citeshttps://doi.org/10.11646/zootaxa.4450.4.4zenodo-depositor-declared
A new species of the stenopodidean shrimp genus Odontozona Holthuis, 1946 (Crustacea: Decapoda: Stenopodidea: Stenopodidae) from the Ryukyu Islands, Indo-West Pacific
inferred← citeshttps://doi.org/10.11646/zootaxa.4648.2.12zenodo-depositor-declared
A new species of the Stenopodidean shrimp Genus Spongicola (Crustacea: Decapoda: Spongicolidae) representing the first record of the genus from the Atlantic Ocean
inferred← citeshttps://doi.org/10.11646/zootaxa.4915.4.8zenodo-depositor-declared
First record of the rare stenopodidean shrimp Odontozona spongicola (Alcock & Anderson, 1899) (Decapoda: Stenopodidea: Stenopodidae) from Indonesia
inferred← citeshttps://doi.org/10.11646/zootaxa.4950.1.7zenodo-depositor-declared
Rediscovery of the rare Mediterranean marine cave stenopodid shrimp Odontozona addaia Pretus, 1990, 30 years after its original description (Crustacea: Decapoda: Stenopodidea)
inferred← citeshttps://doi.org/10.11646/zootaxa.5005.3.3zenodo-depositor-declared
A new species of the deep-sea shrimp genus Spongicoloides (Decapoda: Spongicolidae) from the South China Sea
inferred← citeshttps://doi.org/10.11646/zootaxa.5189.1.23zenodo-depositor-declared
New records of spongicolid shrimps (Crustacea, Decapoda, Stenopodidea) from Taiwan
inferred← citeshttps://doi.org/10.11646/zootaxa.5195.3.5zenodo-depositor-declared
A new report on the deep-sea sponge-associated Spongicoloides weijiaensis Xu, Zhou & Wang, 2017 (Decapoda: Spongicolidae) from the Southwest Indian Ocean Ridge
inferred← citeshttps://doi.org/10.11646/zootaxa.5263.1.5zenodo-depositor-declared
Description of a new genus and new species of deep-water stenopodid shrimp from the western Atlantic, with remarks on Odontozona Holthuis, 1946 and Richardina A. Milne-Edwards, 1881 (Decapoda: Stenopodidea)
inferred← citeshttps://doi.org/10.11646/zootaxa.5496.3.8zenodo-depositor-declared
The first records of Microprosthema pernambucensis (Bochini, Cunha, Terossi & Almeida, 2020) and Odontozona addaia Pretus, 1990 from the tropical eastern Atlantic (Decapoda: Stenopodidea)
inferred← citeshttps://doi.org/10.11646/zootaxa.5701.1.4zenodo-depositor-declared
On a remarkable new stenopodid shrimp (Decapoda: Stenopodidea) from the bathyal depths of the tropical western Atlantic
inferred← citeshttps://doi.org/10.5852/ejt.2024.954.2653zenodo-depositor-declared
A documented checklist of the Crustacea (Stomatopoda, Decapoda) of the southern Guianas (Guyana, Suriname, French Guiana, Brazil Amapá)
inferred← citeshttps://doi.org/10.1002/ar.70255openalex-snapshot
Male reproductive system in stenopodidean shrimps: Unveiling basal reproductive traits in shrimp‐like Pleocyemata (Stenopodidae and Spongicolidae)
inferred← citeshttps://doi.org/10.1007/978-3-031-20966-6_10openalex-snapshot
Symbioses
inferred← citeshttps://doi.org/10.1007/978-3-031-20966-6_12openalex-snapshot
Evolutionary History and Relationships of Shrimps
inferred← citeshttps://doi.org/10.1007/978-3-031-20966-6_3openalex-snapshot
The Families of Decapod Shrimps
inferred← citeshttps://doi.org/10.1007/s00343-019-8329-0openalex-snapshot
Molecular phylogeny of the genus Clibanarius (Decapoda: Anomura: Diogenidae) based on mitochondrial and nuclear DNA sequences
inferred← citeshttps://doi.org/10.1007/s00343-021-0446-xopenalex-snapshot
A new genus and species of shrimp (Crustacea: Axiidea: Axiidae) from the Caroline Ridge, northwest Pacific
inferred← citeshttps://doi.org/10.1007/s12526-023-01386-5openalex-snapshot
Deep-sea fauna at a former red-mud disposal site (Cassidaigne Canyon, NW Mediterranean)
inferred← citeshttps://doi.org/10.1016/j.aquaculture.2022.738955openalex-snapshot
Making sense of the taxonomy of the most commercially important shrimps Penaeus Fabricius, 1798 s. l. (Crustacea: Decapoda: Penaeidae), a way forward
inferred← citeshttps://doi.org/10.1016/j.dsr.2018.03.006openalex-snapshot
A new species of the deep-sea spongicolid genus Spongicoloides (Crustacea, Decapoda, Stenopodidea) and a new species of the glass sponge genus Corbitella (Hexactinellida, Lyssacinosida, Euplectellidae) from a seamount near the Mariana Trench, with a novel commensal relationship between the two…
inferred← citeshttps://doi.org/10.1016/j.gene.2018.07.026openalex-snapshot
Complete mitochondrial genome of the first deep-sea spongicolid shrimp Spongiocaris panglao (Decapoda: Stenopodidea): Novel gene arrangement and the phylogenetic position and origin of Stenopodidea
inferred← citeshttps://doi.org/10.1038/s41598-025-95258-6openalex-snapshot
Identification of housekeeping gene for future studies exploring effects of cryopreservation on gene expression in shrimp
inferred← citeshttps://doi.org/10.1071/9781486311798.bk07895_ch04openalex-snapshot
Stenopodidea – coral shrimps and Venus shrimps
inferred← citeshttps://doi.org/10.1071/is25084openalex-snapshot
Integrative taxonomic study reveals three new species of Lebbeus White, 1847 (Decapoda: Caridea: Thoridae) from deep water in the Philippine Sea and provides insights into the phylogeny of this genus
inferred← citeshttps://doi.org/10.1093/jcbiol/ruaa064openalex-snapshot
A new genus and species from Brazil of the resurrected family Macromaxillocarididae Alvarez, Iliffe & Villalobos, 2006 and a worldwide list of Stenopodidea (Decapoda)
inferred← citeshttps://doi.org/10.1093/jcbiol/ruac063openalex-snapshot
Chicosciencea Bochini, Cunha, Terossi & Almeida, 2020 is a junior subjective synonym of Microprosthema Stimpson, 1860 (Decapoda: Stenopodidea: Spongicolidae)
inferred← citeshttps://doi.org/10.1093/jcbiol/ruad039openalex-snapshot
Chicosciencea Bochini, Cunha, Terossi & Almeida, 2020 is not a subjective junior synonym of Microprosthema Stimpson, 1860 (Decapoda: Stenopodidea: Spongicolidae): A response to Goy (2023)
inferred← citeshttps://doi.org/10.1093/jcbiol/ruae070openalex-snapshot
How many species of shrimps (Decapoda: Caridea, Dendrobranchiata, Stenopodidea) in Brazil? Diversity, geographic distribution, and history of taxonomic studies based on the Catálogo Taxonômico da Fauna do Brasil (Taxonomic Catalog of the Brazilian Fauna)
inferred← citeshttps://doi.org/10.1098/rspb.2019.0079openalex-snapshot
A phylogenomic framework, evolutionary timeline and genomic resources for comparative studies of decapod crustaceans
inferred← citeshttps://doi.org/10.1101/2025.08.07.669097openalex-snapshot
Confirmed Occurrence and Morphological Documentation of Stenopus spinosus (Risso, 1827), from Tenerife, Canary Islands
inferred← citeshttps://doi.org/10.1111/cla.70000openalex-snapshot
Hunting the ghost: phylogenomic analyses reveal divergence, habitat transitions and character evolution of the ghost and mud shrimps (Decapoda: Axiidea)
inferred← citeshttps://doi.org/10.11646/zootaxa.5594.3.5openalex-snapshot
A distinctive new species of spongicolid shrimp assigned to the genus Spongicola De Haan, 1844 (Decapoda: Stenopodidea) from the Ryukyu Islands, Japan
inferred← citeshttps://doi.org/10.1371/journal.pone.0281334openalex-snapshot
New Cretaceous (Aptian/Albian) boxer shrimp (Crustacea, Decapoda, Stenopodidea) from the Araripe Sedimentary Basin, NE, Brazil
inferred← citeshttps://doi.org/10.3390/d13080343openalex-snapshot
Integrative Taxonomy of New Zealand Stenopodidea (Crustacea: Decapoda) with New Species and Records for the Region
inferred← citeshttps://doi.org/10.3390/d16080493openalex-snapshot
A New Genus and Species of Marine Symbiotic Shrimp (Crustacea: Decapoda: Palaemonidae) from New Caledonia
inferred← citeshttps://doi.org/10.3897/zookeys.685.11341openalex-snapshot
A new species of deep-sea sponge-associated shrimp from the North-West Pacific (Decapoda, Stenopodidea, Spongicolidae)
inferred← citeshttps://doi.org/10.7717/peerj.4409openalex-snapshot
The little shrimp that could: phylogeography of the circumtropical Stenopus hispidus (Crustacea: Decapoda), reveals divergent Atlantic and Pacific lineages
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