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Phylogeography: its development and impact in Australo-Papuan ornithology with special reference to paraphyly in Australian birds

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PHYLOGENETIC RELATIONSHIPS OF MITOCHONDRIAL DNA UNDER VARIOUS DEMOGRAPHIC MODELS OF SPECIATION11Work was supported by an NIH predoctoral fellowship to JEN, and by NSF Grant BSR-8217291.
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Statistical phylogeography
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Discordance between morphology and genetic structure among three plumage forms of the Australian Magpie
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When DNA throws a spanner in the taxonomic works: testing for monophyly in the Dusky-capped Flycatcher, Myiarchus tuberculifer, and its South American subspecies, M. t. atriceps
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Major analytical and conceptual shortcomings in a recent taxonomic revision of the Procellariiformes—a reply to Penhallurick and Wink (2004)
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Adaptive divergence in the Superb Fairy-wren (Malurus cyaneus): a mainland versus island comparison of morphology and foraging behaviour
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Subspeciation in the Short-tailed Grasswren(Amytornis merrotsyi, Maluridae)
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Notes on the Taxonomy ofNeositta
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Concepts of Subspecies and Hybrid Zones, and Their Application in Australian Ornithology
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The Avifauna of Kangaroo Island and Causes of Its Impoverishment
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Speciation in Australian Birds Adapted to Arid Habitats
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A Comment on the Relationships Between Miners Manorina SPP in South Australia
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Hybrid Zones in Australian Birds
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Hybridisation Between the White-browed and Atherton Scrubwrens: Detection With Mitochondrial DNA
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Chromosome Evolution, Phylogeny and Speciation of Rock Wallabies (Petrogale, Macropodidae)
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Mitochondrial-Dna Phylogeography of Birds in Eastern Australian Rain-Forests - First Fragments
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Reconciling paleodistribution models and comparative phylogeography in the Wet Tropics rainforest land snail Gnarosophia bellendenkerensis (Brazier 1875)
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Genetic consequences of sequential founder events by an island-colonizing bird
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Inferring Phylogeny Despite Incomplete Lineage Sorting
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Species Concepts and Species Delimitation
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Organelle gene diversity under migration, mutation, and drift: equilibrium expectations, approach to equilibrium, effects of heteroplasmic cells, and comparison to nuclear genes.
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Phylogenetically informative length polymorphism and sequence variability in mitochondrial DNA of Australian songbirds (Pomatostomus).
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Separating population structure from population history: a cladistic analysis of the geographical distribution of mitochondrial DNA haplotypes in the tiger salamander, Ambystoma tigrinum.
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Origins of the Coalescent: 1974-1982
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THE AVERAGE NUMBER OF GENERATIONS UNTIL FIXATION OF A MUTANT GENE IN A FINITE POPULATION
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Species identification using genetic tools: the value of nuclear and mitochondrial gene sequences in whale conservation
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Different Post-Pleistocene Histories of Eurasian Parids
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Widespread Recombination in Published Animal mtDNA Sequences1
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Evolutionary genetics of birds
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Systematics and Mitochondrial Genome Evolution of Australian Rosellas (Aves: Platycercidae)
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Evolutionary Genetics of Birds II. Conservative Protein Evolution in North American Sparrows and Relatives
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Gene Trees in Species Trees
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Cryptic genetic variation and paraphyly in ravens
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Phylogenetic evidence for colour pattern convergence in toxic pitohuis: Müllerian mimicry in birds?
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Unravelling a biogeographical knot: origin of the ‘leapfrog’ distribution pattern of Australo–Papuan sooty owls (Strigiformes) and logrunners (Passeriformes)
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The role of subspecies in obscuring avian biological diversity and misleading conservation policy
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Concordant evolution of plumage colour, feather microstructure and a melanocortin receptor gene between mainland and island populations of a fairy–wren
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Prioritizing species conservation: does the Cape Verde kite exist?
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Are subspecies useful in evolutionary and conservation biology?
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Where and when does a ring start and end? Testing the ring-species hypothesis in a species complex of Australian parrots
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MECHANISMS OF POPULATION DIFFERENTIATION IN MARBLED MURRELETS: HISTORICAL VERSUS CONTEMPORARY PROCESSES
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PERSPECTIVE: GENE DIVERGENCE, POPULATION DIVERGENCE, AND THE VARIANCE IN COALESCENCE TIME IN PHYLOGEOGRAPHIC STUDIES
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EVOLUTIONARY IMPLICATIONS OF DIVERGENT CLINES IN AN AVIAN (MANACUS: AVES) HYBRID ZONE
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STOCHASTICITY OVERRULES THE "THREE-TIMES RULE": GENETIC DRIFT, GENETIC DRAFT, AND COALESCENCE TIMES FOR NUCLEAR LOCI VERSUS MITOCHONDRIAL DNA
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SPECIATIONAL HISTORY OF AUSTRALIAN GRASS FINCHES (POEPHILA) INFERRED FROM THIRTY GENE TREES
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GENETIC POPULATION STRUCTURE AND CALL VARIATION IN A PASSERINE BIRD, THE SATIN BOWERBIRD, PTILONORHYNCHUS VIOLACEUS
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Reconciling historical processes and population structure in the sooty tern Sterna fuscata
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Implications of mitochondrial DNA polyphyly in two ecologically undifferentiated but morphologically distinct migratory birds, the masked and white‐browed woodswallows Artamus spp. of inland Australia
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Application of molecular clocks in ornithology revisited
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Calibrating molecular estimates of substitution rates and divergence times in birds
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Molecular phylogenetics and diversification within one of the most geographically variable bird species complexes Pachycephala pectoralis / melanura
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Geographical variation in size of an Australian honeyeater (Aves: Meliphagidae): an example of Bergmann's rule
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Differing effects of isolation on evolution of bird songs: examples from an island-mainland comparison of three species
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Directional asymmetry of long‐distance dispersal and colonization could mislead reconstructions of biogeography
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Climate change and the origin of migratory pathways in the Swainson's thrush,Catharus ustulatus
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Lack of phylogeographic structure in three widespread Australian birds reinforces emerging challenges in Australian historical biogeography
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The phylogeography of palm cockatoos, Probosciger aterrimus, in the dynamic Australo‐Papuan region
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Mapping the evolutionary twilight zone: molecular markers, populations and geography
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The perils of single gene trees — mitochondrial versus single‐copy nuclear DNA variation in white‐eyes (Aves: Zosteropidae)
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Phylogeny and historical aspects of the ecology of eastern Australian scrubwrens Sericornis spp. — evidence from mitochondrial DNA
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Applications of mitochondrial DNA analysis in conservation: a critical review
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Phylogeography of an east Australian wet‐forest bird, the satin bowerbird (Ptilonorhynchus violaceus), derived from mtDNA, and its relationship to morphology
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Genetic signatures of intermediate divergence: population history of Old and New World Holarctic ravens (Corvus corax)
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Lineage origin and expansion of a Neotropical migrant songbird after recent glaciation events
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Pleistocene refugia in an arid landscape: analysis of a widely distributed Australian passerine
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Molecular and morphological patterns of introgression between two large white‐headed gull species in a zone of recent secondary contact
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Contrasting patterns of mitochondrial and microsatellite genetic structure among Western European populations of tawny owls (Strix aluco)
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Genomics of natural bird populations: a gene‐based set of reference markers evenly spread across the avian genome
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The coup de grâce for the nested clade phylogeographic analysis?
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Babies and bathwater: a comment on the premature obituary for nested clade phylogeographical analysis
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On the falsifiability of the nested clade phylogeographic analysis method
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Sequencing goes 454 and takes large‐scale genomics into the wild
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Nested clade analysis: an extensively validated method for strong phylogeographic inference
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Mitochondrial DNA under siege in avian phylogeography
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Calibrating the avian molecular clock
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Natural selection in avian protein‐coding genes expressed in brain
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Twenty years of phylogeography: the state of the field and the challenges for the Southern Hemisphere
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Birth of a biome: insights into the assembly and maintenance of the Australian arid zone biota
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Transcriptomic variation and plasticity in rufous‐collared sparrows ( Zonotrichia capensis ) along an altitudinal gradient
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The past and future influence of geographic information systems on hybrid zone, phylogeographic and speciation research
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Intraspecific phylogeography of the white‐rumped snowfinch (Onychostruthus taczanowskii) endemic to the Tibetan Plateau based on mtDNA sequences
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Comprehensive DNA barcode coverage of North American birds
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Bayesian clustering algorithms ascertaining spatial population structure: a new computer program and a comparison study
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Sequencing breakthroughs for genomic ecology and evolutionary biology
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MITOCHONDRIAL GENE TREES AND THE EVOLUTIONARY RELATIONSHIP OF MALLARD AND BLACK DUCKS
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GENETIC VARIABILITY AND POPULATION DIFFERENTIATION INFERRED FROM DNA FINGERPRINTING IN SILVEREYES (AVES: ZOSTEROPIDAE)
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MITOCHONDRIAL GENE GENEALOGY AND GENE FLOW AMONG ISLAND AND MAINLAND POPULATIONS OF A SEDENTARY SONGBIRD, THE GREY‐CROWNED BABBLER (POMATOSTOMUS TEMPORALIS)
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INFERRING PHYLOGENIES FROM mt DNA VARIATION: MITOCHONDRIAL-GENE TREES VERSUS NUCLEAR-GENE TREES
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EXAMINING TWO STANDARD ASSUMPTIONS OF ANCESTRAL RECONSTRUCTIONS: REPEATED LOSS OF DICHROMATISM IN DABBLING DUCKS (ANATINI)
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STATISTICAL TESTS FOR TAXONOMIC DISTINCTIVENESS FROM OBSERVATIONS OF MONOPHYLY
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ESTIMATING A GEOGRAPHICALLY EXPLICIT MODEL OF POPULATION DIVERGENCE
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NUCLEAR LOCI AND COALESCENT METHODS SUPPORT ANCIENT HYBRIDIZATION AS CAUSE OF MITOCHONDRIAL PARAPHYLY BETWEEN GADWALL AND FALCATED DUCK (ANASSPP.)
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ECOLOGICAL NICHE CONSERVATISM AND PLEISTOCENE REFUGIA IN THE THRUSH-LIKE MOURNER, SCHIFFORNIS SP., IN THE NEOTROPICS
inferredcites →https://doi.org/10.1111/j.1558-5646.2008.00322.xopenalex-snapshot
BIRD SPECIATION: SELECTION AND THE ORIGIN OF SPECIES1
inferredcites →https://doi.org/10.1111/j.1558-5646.2008.00349.xopenalex-snapshot
FINE-SCALE PHYLOGEOGRAPHIC CONGRUENCE DESPITE DEMOGRAPHIC INCONGRUENCE IN TWO LOW-MOBILITY SAPROXYLIC SPRINGTAILS
inferredcites →https://doi.org/10.1111/j.1558-5646.2008.00372.xopenalex-snapshot
MULTILOCUS PHYLOGEOGRAPHY OF A HOLARCTIC DUCK: COLONIZATION OF NORTH AMERICA FROM EURASIA BY GADWALL (ANAS STREPERA)
inferredcites →https://doi.org/10.1111/j.1558-5646.2008.00414.xopenalex-snapshot
ESTIMATING SPECIES TREES USING MULTIPLE-ALLELE DNA SEQUENCE DATA
inferredcites →https://doi.org/10.1111/j.1558-5646.2008.00481.xopenalex-snapshot
WHY DOES A METHOD THAT FAILS CONTINUE TO BE USED?
inferredcites →https://doi.org/10.1111/j.1558-5646.2008.00543.xopenalex-snapshot
DIVERGENCE ACROSS AUSTRALIA'S CARPENTARIAN BARRIER: STATISTICAL PHYLOGEOGRAPHY OF THE RED-BACKED FAIRY WREN (MALURUS MELANOCEPHALUS)
inferredcites →https://doi.org/10.1111/j.1600-048x.2008.04383.xopenalex-snapshot
Inferring the phylogeography and evolutionary history of the splendid fairy‐wren Malurus splendens from mitochondrial DNA and spectrophotometry
inferredcites →https://doi.org/10.1126/science.256.5054.193openalex-snapshot
Hybridization of Bird Species
inferredcites →https://doi.org/10.1126/science.260.5114.1643openalex-snapshot
Unidirectional Spread of Secondary Sexual Plumage Traits Across an Avian Hybrid Zone
inferredcites →https://doi.org/10.1126/science.97.2526.482-bopenalex-snapshot
The Transactions of the Royal Society of South Australia
inferredcites →https://doi.org/10.1146/annurev.ecolsys.32.081501.114109openalex-snapshot
The Units of Selection on Mitochondrial DNA
inferredcites →https://doi.org/10.1146/annurev.ecolsys.34.011802.132421openalex-snapshot
Species-Level Paraphyly and Polyphyly: Frequency, Causes, and Consequences, with Insights from Animal Mitochondrial DNA
inferredcites →https://doi.org/10.1146/annurev.ecolsys.35.112202.130128openalex-snapshot
Operational Criteria for Delimiting Species
inferredcites →https://doi.org/10.1146/annurev.ecolsys.36.091704.175513openalex-snapshot
The Population Biology of Mitochondrial DNA and Its Phylogenetic Implications
inferredcites →https://doi.org/10.1146/annurev.es.18.110187.001413openalex-snapshot
EVOLUTION OF ANIMAL MITOCHONDRIAL DNA: RELEVANCE FOR POPULATION BIOLOGY AND SYSTEMATICS
inferredcites →https://doi.org/10.1146/annurev.es.18.110187.002421openalex-snapshot
INTRASPECIFIC PHYLOGEOGRAPHY: The Mitochondrial DNA Bridge Between Population Genetics and Systematics
inferredcites →https://doi.org/10.1186/1471-2148-8-81openalex-snapshot
Single mitochondrial gene barcodes reliably identify sister-species in diverse clades of birds
inferredcites →https://doi.org/10.1371/journal.pbio.0020286openalex-snapshot
Population History and Natural Selection Shape Patterns of Genetic Variation in 132 Genes
inferredcites →https://doi.org/10.1371/journal.pbio.0020312openalex-snapshot
Identification of Birds through DNA Barcodes
inferredcites →https://doi.org/10.1371/journal.pbio.0020354openalex-snapshot
DNA Barcoding: Promise and Pitfalls
inferredcites →https://doi.org/10.1371/journal.pbio.0030193openalex-snapshot
On the Number of New World Founders: A Population Genetic Portrait of the Peopling of the Americas
inferredcites →https://doi.org/10.1525/auk.2008.4408openalex-snapshot
:Speciation in Birds
inferredcites →https://doi.org/10.1534/genetics.103.022830openalex-snapshot
A Separation-of-Timescales Approach to the Coalescent in a Continuous Population
inferredcites →https://doi.org/10.1534/genetics.103.024182openalex-snapshot
Multilocus Methods for Estimating Population Sizes, Migration Rates and Divergence Time, With Applications to the Divergence of Drosophila pseudoobscura and D. persimilis
inferredcites →https://doi.org/10.1534/genetics.107.086264openalex-snapshot
A Linkage Map of the Zebra Finch Taeniopygia guttata Provides New Insights Into Avian Genome Evolution
inferredcites →https://doi.org/10.1554/0014-3820(2001)055[0859:pngcfm]2.0.co;2openalex-snapshot
PREDICTING NUCLEAR GENE COALESCENCE FROM MITOCHONDRIAL DATA: THE THREE-TIMES RULE
inferredcites →https://doi.org/10.1641/0006-3568(2005)055[0060:dvdesl]2.0.co;2openalex-snapshot
Diagnosable versus Distinct: Evaluating Species Limits in Birds
inferredcites →https://doi.org/10.1642/0004-8038(2003)120[0961:nipspc]2.0.co;2openalex-snapshot
NOVEL INTRON PHYLOGENY SUPPORTS PLUMAGE CONVERGENCE IN ORIOLES (ICTERUS)
inferredcites →https://doi.org/10.1642/0004-8038(2004)121[0001:mdamsf]2.0.co;2openalex-snapshot
MITOCHONDRIAL DATING AND MIXED SUPPORT FOR THE “2% RULE” IN BIRDS
inferredcites →https://doi.org/10.1642/0004-8038(2005)122[0403:pparmc]2.0.co;2openalex-snapshot
PATTERN, PROCESS, AND RIGOR MEET CLASSIFICATION
inferredcites →https://doi.org/10.1642/0004-8038(2006)123[660:msapod]2.0.co;2openalex-snapshot
MOLECULAR SYSTEMATICS AND PATTERNS OF DIVERSIFICATION IN PYRRHURA (PSITTACIDAE), WITH SPECIAL REFERENCE TO THE PICTA-LEUCOTIS COMPLEX
inferredcites →https://doi.org/10.2307/2409979openalex-snapshot
Mitochondrial Gene Genealogy and Gene Flow among Island and Mainland Populations of a Sedentary Songbird, the Grey-Crowned Babbler (Pomatostomus temporalis)
inferredcites →https://doi.org/10.2307/2411818openalex-snapshot
The Subspecies Concept and Its Taxonomic Application
inferredcites →https://doi.org/10.2307/2992339openalex-snapshot
Evolutionary Genetics of Birds II. Conservative Protein Evolution in North American Sparrows and Relatives
inferredcites →https://doi.org/10.2307/4088154openalex-snapshot
Phylogeography of Mitochondrial DNA in Two Species of White-Eyes in Australia
inferredcites →https://doi.org/10.2307/4088506openalex-snapshot
Population-Genetic Structure of a Philopatric, Colonially Nesting Seabird, the Short-Tailed Shearwater (Puffinus tenuirostris)
inferredcites →https://doi.org/10.2307/4089130openalex-snapshot
Numts: A Challenge for Avian Systematics and Population Biology
inferredcites →https://doi.org/10.2307/4089339openalex-snapshot
Phylogeny and Biogeography of Dabbling Ducks (Genus: Anas): A Comparison of Molecular and Morphological Evidence
inferredcites →https://doi.org/10.5281/zenodo.15912099openalex-snapshot
A mitochondrial DNA perspective on the historical biogeography of mideastern Queensland rainforest birds
inferredcites →https://doi.org/10.5860/choice.37-5647openalex-snapshot
Phylogeography: the history and formation of species
inferredcites →https://doi.org/10.5962/bhl.part.7960openalex-snapshot
Bird speciation on the Australian Continent

What points at this work

Incoming claims: where this work appears in other papers’ reference lists and arguments.

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The genus Amegilla (Hymenoptera, Apidae, Anthophorini) in Australia: a revision of the subgenus Asaropoda
inferred← citeshttps://doi.org/10.1002/ece3.2168openalex-snapshot
Nuclear locus divergence at the early stages of speciation in the Orchard Oriole complex
inferred← citeshttps://doi.org/10.1002/ece3.2381openalex-snapshot
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inferred← citeshttps://doi.org/10.1002/ece3.517openalex-snapshot
Australasian sky islands act as a diversity pump facilitating peripheral speciation and complex reversal from narrow endemic to widespread ecological supertramp
inferred← citeshttps://doi.org/10.1002/ece3.7099openalex-snapshot
Divergent lineages in a semi‐arid mallee species, Eucalyptus behriana, correspond to a major geographic break in southeastern Australia
inferred← citeshttps://doi.org/10.1002/ece3.87openalex-snapshot
A species assemblage approach to comparative phylogeography of birds in southern Australia
inferred← citeshttps://doi.org/10.1007/978-3-319-91689-7_10openalex-snapshot
Phylogeography and the Role of Hybridization in Speciation
inferred← citeshttps://doi.org/10.1007/s10336-016-1361-3openalex-snapshot
Integrating morphology, phylogeography, and ecological niche modeling to explore population differentiation in North African Common Chaffinches
inferred← citeshttps://doi.org/10.1007/s10336-017-1501-4openalex-snapshot
Phylogeography of the House Bunting complex: discordance between species limits and genetic markers
inferred← citeshttps://doi.org/10.1007/s10336-021-01893-xopenalex-snapshot
Common patterns in the molecular phylogeography of western palearctic birds: a comprehensive review
inferred← citeshttps://doi.org/10.1007/s10592-010-0161-1openalex-snapshot
A cryptic and critically endangered species revealed by mitochondrial DNA analyses: the Western Ground Parrot
inferred← citeshttps://doi.org/10.1007/s10750-013-1600-zopenalex-snapshot
Aquatic biodiversity in the Mediterranean climate rivers of southwestern Australia
inferred← citeshttps://doi.org/10.1016/j.aanat.2011.04.002openalex-snapshot
Moa's Ark or volant ghosts of Gondwana? Insights from nineteen years of ancient DNA research on the extinct moa (Aves: Dinornithiformes) of New Zealand
inferred← citeshttps://doi.org/10.1016/j.biocon.2014.04.005openalex-snapshot
Integrating phylogeography and morphometrics to assess conservation merits and inform conservation strategies for an endangered subspecies of a common bird species
inferred← citeshttps://doi.org/10.1016/j.ympev.2011.03.017openalex-snapshot
Molecular systematics of two enigmatic genera Psittacella and Pezoporus illuminate the ecological radiation of Australo-Papuan parrots (Aves: Psittaciformes)
inferred← citeshttps://doi.org/10.1016/j.ympev.2012.02.016openalex-snapshot
Speciation in chestnut-shouldered fairy-wrens (Malurus spp.) and rapid phenotypic divergence in variegated fairy-wrens (Malurus lamberti): A multilocus approach
inferred← citeshttps://doi.org/10.1016/j.ympev.2015.05.012openalex-snapshot
Phylogenetic analysis of the Australian rosella parrots (Platycercus) reveals discordance among molecules and plumage
inferred← citeshttps://doi.org/10.1016/j.ympev.2015.07.003openalex-snapshot
Evolutionary dynamics of a cycad obligate pollination mutualism – Pattern and process in extant Macrozamia cycads and their specialist thrips pollinators
inferred← citeshttps://doi.org/10.1016/j.ympev.2017.07.011openalex-snapshot
Speciation, range contraction and extinction in the endemic New Zealand King Shag complex
inferred← citeshttps://doi.org/10.1016/j.ympev.2018.02.026openalex-snapshot
Contrasting patterns of diversification in two sister species of martins (Aves: Hirundinidae): The Sand Martin Riparia riparia and the Pale Martin R. diluta
inferred← citeshttps://doi.org/10.1038/ncomms4994openalex-snapshot
Australia’s arid-adapted butcherbirds experienced range expansions during Pleistocene glacial maxima
inferred← citeshttps://doi.org/10.1038/s41437-019-0206-2openalex-snapshot
Pleistocene-dated biogeographic barriers drove divergence within the Australo-Papuan region in a sex-specific manner: an example in a widespread Australian songbird
inferred← citeshttps://doi.org/10.1071/mu07011openalex-snapshot
Systematic and conservation implications of mitochondrial DNA diversity in emu-wrens, Stipiturus (Aves: Maluridae)
inferred← citeshttps://doi.org/10.1071/mu09031openalex-snapshot
Evolution of the Australasian songbird fauna
inferred← citeshttps://doi.org/10.1071/mu10008openalex-snapshot
Towards modelling persistence of woodland birds: the role of genetics
inferred← citeshttps://doi.org/10.1071/mu10020openalex-snapshot
The impact of Pleistocene changes of climate and landscape on Australian birds: a test using the Pied Butcherbird (Cracticus nigrogularis)
inferred← citeshttps://doi.org/10.1071/mu10050openalex-snapshot
Phylogeography and taxonomy of the Little Bronze-Cuckoo ( Chalcites minutillus ) in Australia's monsoon tropics
inferred← citeshttps://doi.org/10.1071/mu12081openalex-snapshot
The Maluridae: inferring avian biology and evolutionary history from DNA sequences
inferred← citeshttps://doi.org/10.1071/mu12109openalex-snapshot
The impacts of fire on birds in Australia's tropical savannas
inferred← citeshttps://doi.org/10.1071/mu14047openalex-snapshot
Evolutionary history of birds across southern Australia: structure, history and taxonomic implications of mitochondrial DNA diversity in an ecologically diverse suite of species
inferred← citeshttps://doi.org/10.1071/mu15018openalex-snapshot
Rise (and demise?) of subspecies in the Galah (Eolophus roseicapilla), a widespread and abundant Australian cockatoo
inferred← citeshttps://doi.org/10.1071/muv108n4_bropenalex-snapshot
Book reviews
inferred← citeshttps://doi.org/10.1071/muv111n3_edopenalex-snapshot
Museum collections in ornithology: today's record of avian biodiversity for tomorrow's world
inferred← citeshttps://doi.org/10.1071/muv111n4_bropenalex-snapshot
Book review
inferred← citeshttps://doi.org/10.1071/zo12012openalex-snapshot
Biogeographic barriers in north-western Australia: an overview and standardisation of nomenclature
inferred← citeshttps://doi.org/10.1071/zo13095openalex-snapshot
Taxonomy of rock-wallabies, Petrogale (Marsupialia: Macropodidae). IV. Multifaceted study of the brachyotis group identifies additional taxa
inferred← citeshttps://doi.org/10.1071/zo15047openalex-snapshot
Mitochondrial phylogeography of the critically endangered Capricorn yellow chat (Epthianura crocea macgregori)
inferred← citeshttps://doi.org/10.1080/01584197.2016.1271988openalex-snapshot
A review of historical and contemporary processes affecting population genetic structure of Southern Ocean seabirds
inferred← citeshttps://doi.org/10.1080/01584197.2017.1313685openalex-snapshot
A case for realigning species limits in the southern Australian whipbirds long recognised as the Western Whipbird (Psophodes nigrogularis)
inferred← citeshttps://doi.org/10.1080/01584197.2017.1313686openalex-snapshot
Patterns of morphological and mitochondrial diversity in parapatric subspecies of the Thick-billed Grasswren (Amytornis modestus)
inferred← citeshttps://doi.org/10.1080/01584197.2017.1387030openalex-snapshot
Resolving a phylogenetic hypothesis for parrots: implications from systematics to conservation
inferred← citeshttps://doi.org/10.1080/01584197.2018.1498744openalex-snapshot
Diversification ofPetroicarobins across the Australo-Pacific region: first insights into the phylogenetic affinities of New Guinea’s highland robin species
inferred← citeshttps://doi.org/10.1080/01584197.2019.1605831openalex-snapshot
Aberrantly plumaged orioles from the Trans-Fly savannas of New Guinea and their ecological and evolutionary significance
inferred← citeshttps://doi.org/10.1080/01584197.2019.1670585openalex-snapshot
Phylogeography of the blue-winged kookaburraDacelo leachiiacross tropical northern Australia and New Guinea
inferred← citeshttps://doi.org/10.1080/01584197.2020.1776622openalex-snapshot
A taxonomic revision of the Striated Grasswren Amytornis striatus complex (Aves: Maluridae) after analysis of phylogenetic and phenotypic data
inferred← citeshttps://doi.org/10.1080/01584197.2021.1922293openalex-snapshot
Genetic and morphological relationships of fieldwrens (Calamanthus): implications for conservation status and management
inferred← citeshttps://doi.org/10.1080/01584197.2023.2173611openalex-snapshot
Population genomics and phylogeography of four Australasian waterfowl
inferred← citeshttps://doi.org/10.1080/01584197.2025.2595502openalex-snapshot
On the rarity of ratite hybridization
inferred← citeshttps://doi.org/10.1080/03036758.2015.1084337openalex-snapshot
Taxonomic status of Cyanoramphus parakeets on the Auckland Islands and implications for the validity of the orange‐fronted parakeet as a discrete species
inferred← citeshttps://doi.org/10.1080/03721426.2011.10887148openalex-snapshot
Subspecies of the Thick-Billed Grasswren Amytornis Modestus (Aves-Maluridae)
inferred← citeshttps://doi.org/10.1093/biolinnean/blac144openalex-snapshot
Multilocus phylogeography, population genetics and niche evolution of Australian brown and black-tailed treecreepers (Aves:Climacteris)
inferred← citeshttps://doi.org/10.1093/biolinnean/blad009openalex-snapshot
Subspecies limits based on morphometry and mitochondrial DNA genomics in a polytypic species, the common grackle, Quiscalus quiscula
inferred← citeshttps://doi.org/10.1093/biolinnean/blae111openalex-snapshot
Phylogeography and palaeoecological modelling shed light on the diversification history of a montane New Guinea passerine, Peneothello cyanus (Petroicidae)
inferred← citeshttps://doi.org/10.1093/biolinnean/blx004openalex-snapshot
Phylogeography and geno-phenotypic discordance in a widespread Australian bird, the Variegated Fairy-wren, Malurus lamberti (Aves: Maluridae)
inferred← citeshttps://doi.org/10.1093/ornithology/ukab012openalex-snapshot
Species limits in birds: Australian perspectives on interrelated challenges of allopatry, introgression of mitochondrial DNA, recent speciation, and selection
inferred← citeshttps://doi.org/10.1093/oso/9780198783398.001.0001openalex-snapshot
Genetic Management of Fragmented Animal and Plant Populations
inferred← citeshttps://doi.org/10.1093/oso/9780198783398.002.0003openalex-snapshot
Copyright Page
inferred← citeshttps://doi.org/10.1093/oso/9780198783398.002.0005openalex-snapshot
Preface
inferred← citeshttps://doi.org/10.1093/oso/9780198783398.002.0007openalex-snapshot
List of Symbols
inferred← citeshttps://doi.org/10.1093/oso/9780198783398.002.0022openalex-snapshot
Glossary
inferred← citeshttps://doi.org/10.1093/oso/9780198783398.003.0001openalex-snapshot
Introduction
inferred← citeshttps://doi.org/10.1093/oso/9780198783398.003.0002openalex-snapshot
Evolutionary genetics of small populations
inferred← citeshttps://doi.org/10.1093/oso/9780198783398.003.0003openalex-snapshot
Inbreeding reduces reproductive fitness
inferred← citeshttps://doi.org/10.1093/oso/9780198783398.003.0004openalex-snapshot
Loss of genetic diversity reduces ability to adapt
inferred← citeshttps://doi.org/10.1093/oso/9780198783398.003.0005openalex-snapshot
Population fragmentation causes inadequate gene flow and increases extinction risk
inferred← citeshttps://doi.org/10.1093/oso/9780198783398.003.0006openalex-snapshot
Genetic rescue by augmenting gene flow
inferred← citeshttps://doi.org/10.1093/oso/9780198783398.003.0007openalex-snapshot
Outbreeding depression is uncommon and predictable
inferred← citeshttps://doi.org/10.1093/oso/9780198783398.003.0008openalex-snapshot
Modified rescue and risk expectations for species with diverse mating systems and modes of inheritance
inferred← citeshttps://doi.org/10.1093/oso/9780198783398.003.0009openalex-snapshot
Is the taxonomy appropriate? Delineating species for conservation purposes
inferred← citeshttps://doi.org/10.1093/oso/9780198783398.003.0010openalex-snapshot
Determining the number and location of genetically differentiated population fragments
inferred← citeshttps://doi.org/10.1093/oso/9780198783398.003.0011openalex-snapshot
Are there populations suffering genetic erosion that would benefit from augmented gene flow?
inferred← citeshttps://doi.org/10.1093/oso/9780198783398.003.0012openalex-snapshot
Managing gene flow among isolated population fragments. I. Limited information
inferred← citeshttps://doi.org/10.1093/oso/9780198783398.003.0013openalex-snapshot
Managing gene flow among isolated population fragments. II. Management based on kinship
inferred← citeshttps://doi.org/10.1093/oso/9780198783398.003.0014openalex-snapshot
Global climate change increases the need for genetic management
inferred← citeshttps://doi.org/10.1093/oso/9780198783398.003.0015openalex-snapshot
Take home messages
inferred← citeshttps://doi.org/10.1093/oso/9780198783398.005.0001openalex-snapshot
Genetic markers for conservation purposes
inferred← citeshttps://doi.org/10.1093/oso/9780198783398.005.0002openalex-snapshot
VORTEX simulation software for population viability analysis
inferred← citeshttps://doi.org/10.1093/oso/9780198783398.005.0003openalex-snapshot
How should a taxonomic re-evaluation be conducted if required?
inferred← citeshttps://doi.org/10.1093/sysbio/syr101openalex-snapshot
A Species Tree for the Australo-Papuan Fairy-wrens and Allies (Aves: Maluridae)
inferred← citeshttps://doi.org/10.1111/1749-4877.12796openalex-snapshot
Evolution and conservation genetics of pangolins
inferred← citeshttps://doi.org/10.1111/bij.12082openalex-snapshot
Comparative phylogeography of Australo-Papuan mangrove-restricted and mangrove-associated avifaunas
inferred← citeshttps://doi.org/10.1111/bij.12132openalex-snapshot
Hidden species diversity of Australian burrowing snakes (Ramphotyphlops)
inferred← citeshttps://doi.org/10.1111/j.1365-2699.2010.02293.xopenalex-snapshot
Phylogeographic analysis detects congruent biogeographic patterns between a woodland agamid and Australian wet tropics taxa despite disparate evolutionary trajectories
inferred← citeshttps://doi.org/10.1111/j.1365-2699.2011.02535.xopenalex-snapshot
Decline of a biome: evolution, contraction, fragmentation, extinction and invasion of the Australian mesic zone biota
inferred← citeshttps://doi.org/10.1111/j.1365-294x.2010.04730.xopenalex-snapshot
Multilocus analysis of honeyeaters (Aves: Meliphagidae) highlights spatio-temporal heterogeneity in the influence of biogeographic barriers in the Australian monsoonal zone
inferred← citeshttps://doi.org/10.1111/j.1365-294x.2011.05036.xopenalex-snapshot
Palaeoclimate change drove diversification among isolated mountain refugia in the Australian arid zone
inferred← citeshttps://doi.org/10.1111/j.1365-294x.2011.05095.xopenalex-snapshot
Random interbreeding between cryptic lineages of the Common Raven: evidence for speciation in reverse
inferred← citeshttps://doi.org/10.1111/j.1365-294x.2011.05330.xopenalex-snapshot
Testing the effect of transient Plio-Pleistocene barriers in monsoonal Australo-Papua: did mangrove habitats maintain genetic connectivity in the Black Butcherbird?
inferred← citeshttps://doi.org/10.1111/j.1365-294x.2012.05523.xopenalex-snapshot
Multiple biogeographical barriers identified across the monsoon tropics of northern Australia: phylogeographic analysis of the brachyotis group of rock‐wallabies
inferred← citeshttps://doi.org/10.1111/j.1365-3113.2010.00558.xopenalex-snapshot
Integrative taxonomy, or iterative taxonomy?
inferred← citeshttps://doi.org/10.1111/j.1472-4642.2010.00658.xopenalex-snapshot
A case for incorporating phylogeography and landscape genetics into species distribution modelling approaches to improve climate adaptation and conservation planning
inferred← citeshttps://doi.org/10.1111/j.1474-919x.2010.01051.xopenalex-snapshot
Quantitative criteria for species delimitation
inferred← citeshttps://doi.org/10.1111/j.1600-048x.2008.04652.xopenalex-snapshot
A tangled tale of two teal: population history of the grey Anas gracilis and chestnut teal A. castanea of Australia
inferred← citeshttps://doi.org/10.1111/j.1600-048x.2012.05826.xopenalex-snapshot
Multilocus phylogeography of Australian teals ( Anas spp.): a case study of the relationship between vagility and genetic structure
inferred← citeshttps://doi.org/10.1111/jav.00595openalex-snapshot
Divergence in calls but not songs in the orchard oriole complex: Icterus spurius and I. fuertesi
inferred← citeshttps://doi.org/10.1111/jbi.70173openalex-snapshot
Breaking New Ground: Niche Divergence and Expansion in Ground Parrots (Pezoporini: Platycercinae)
inferred← citeshttps://doi.org/10.1111/jzs.12071openalex-snapshot
A review of phylogeographic analyses of animal taxa from the Aegean and surrounding regions
inferred← citeshttps://doi.org/10.1111/jzs.12206openalex-snapshot
Phylogeography of theOenanthe hispanica-pleschanka-cypriacacomplex (Aves, Muscicapidae: Saxicolinae): Diversification history of open-habitat specialists based on climate niche models, genetic data, and morphometric data
inferred← citeshttps://doi.org/10.1111/mec.14114openalex-snapshot
Perpendicular axes of differentiation generated by mitochondrial introgression
inferred← citeshttps://doi.org/10.1111/mec.14488openalex-snapshot
Climate‐driven mitochondrial selection: A test in Australian songbirds
inferred← citeshttps://doi.org/10.1111/zoj.12376openalex-snapshot
Genetic and morphological evidence for two species ofLeucocarboshag (Aves, Pelecaniformes, Phalacrocoracidae) from southern South Island of New Zealand
inferred← citeshttps://doi.org/10.1126/science.1228282openalex-snapshot
An Update of Wallace’s Zoogeographic Regions of the World
inferred← citeshttps://doi.org/10.1186/1742-9994-6-29openalex-snapshot
Filling the gap - COI barcode resolution in eastern Palearctic birds
inferred← citeshttps://doi.org/10.1186/s12862-019-1346-yopenalex-snapshot
DNA barcoding a unique avifauna: an important tool for evolution, systematics and conservation
inferred← citeshttps://doi.org/10.1371/journal.pone.0090769openalex-snapshot
Strong Phylogeographic Structure in a Sedentary Seabird, the Stewart Island Shag (Leucocarbo chalconotus)
inferred← citeshttps://doi.org/10.1371/journal.pone.0174812openalex-snapshot
Congruent biogeographical disjunctions at a continent-wide scale: Quantifying and clarifying the role of biogeographic barriers in the Australian tropics
inferred← citeshttps://doi.org/10.1525/auk.2011.128.4.620openalex-snapshot
Genetic Introgression: An Integral but neglected component of speciation in birds
inferred← citeshttps://doi.org/10.1670/10-115.1openalex-snapshot
Extensive Phylogeographic and Morphological Diversity in Diporiphora nobbi (Agamidae) Leads to a Taxonomic Review and a New Species Description
inferred← citeshttps://doi.org/10.1676/wils-128-01-22-31.1openalex-snapshot
Morphological and genetic variation of the Yellow-backed Oriole ( Icterus chrysater ) across its widely disjunct distribution in Central America
inferred← citeshttps://doi.org/10.18699/vjgb-25-61openalex-snapshot
Genetic variation and phylogeography of the magpie’s genus Pica in the Holarctic
inferred← citeshttps://doi.org/10.19227/jzar.v2i1.60openalex-snapshot
Subspecies identification with mtDNA and morphometrics in captive palm cockatoos, Probosciger aterrimus
inferred← citeshttps://doi.org/10.20417/nzjecol.42.27openalex-snapshot
The importance of recognising and conserving biological diversity: a reply to Dussex et al. (2018)
inferred← citeshttps://doi.org/10.25226/bboc.v140i2.2020.a6openalex-snapshot
Two new but threatened subspecies of Rufous Grasswren Amytornis whitei (Maluridae)
inferred← citeshttps://doi.org/10.2984/65.1.069openalex-snapshot
Prehistoric Birds and Bats from the Atiahara Site, Tubuai, Austral Islands, East Polynesia
inferred← citeshttps://doi.org/10.3897/zookeys.653.11177openalex-snapshot
The genus Amegilla (Hymenoptera, Apidae, Anthophorini) in Australia: A revision of the subgenera Notomegilla and Zonamegilla
inferred← citeshttps://doi.org/10.3897/zookeys.809.28743openalex-snapshot
Phylogeography indicates incomplete genetic divergence among phenotypically differentiated montane forest populations of Atlapetes albinucha (Aves, Passerellidae)
inferred← citeshttps://doi.org/10.5204/thesis.eprints.203859openalex-snapshot
Phylogeography, habitat and resource use of Nyctimene robinsoni
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