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Evolution and systematics of Australian Casearia Jacq. (Salicaceae), with two new species and one new subspecies described from North Queensland

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What this work says

Outgoing claims: the papers this work cites, builds on, or argues with.

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hybpiper‐nf and paragone‐nf: Containerization and additional options for target capture assembly and paralog resolution

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Character evolution and biogeography of Casearia (Salicaceae): Evidence for the South American origin of a pantropical genus and for multiple migrations to the Caribbean islands

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Progenitor‐derivative species pairs and plant speciation

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Australian rainforests: patterns and change

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A synopsis of Casearia Jacq. (Samydeae – Salicaceae) in West and Central Africa with a description of a new species from Eastern Congo (Kinshasa)

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Casearia septandra (Salicaceae), a new tree species from the mountains of Guinea, West Africa

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Global Brassicaceae phylogeny based on filtering of 1,000-gene dataset

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Glacial and interglacial refugia within a long-term rainforest refugium: The Wet Tropics Bioregion of NE Queensland, Australia

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HybPhaser identifies hybrid evolution in Australian Thelypteridaceae

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Phylogenetic insights into the Salicaceae: The evolution of willows and beyond

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Fast and sensitive protein alignment using DIAMOND

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ModelFinder: fast model selection for accurate phylogenetic estimates

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Phylogenomics and the rise of the angiosperms

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Comparative phylogeography and the history of endemic vertebrates in the Wet Tropics rainforests of Australia

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Patterns and levels of endemism in the Australian Wet Tropics rainforest: evidence from flightless insects

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Navigating phylogenetic conflict and evolutionary inference in plants with target-capture data

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The Genomics for Australian Plants (GAP) framework initiative – developing genomic resources for understanding the evolution and conservation of the Australian flora

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Reconciling paleodistribution models and comparative phylogeography in the Wet Tropics rainforest land snail Gnarosophia bellendenkerensis (Brazier 1875)

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The Newick utilities: high-throughput phylogenetic tree processing in the U nix shell

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Trimmomatic: a flexible trimmer for Illumina sequence data

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ASTRAL: genome-scale coalescent-based species tree estimation

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IQ-TREE 2: New Models and Efficient Methods for Phylogenetic Inference in the Genomic Era

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ASTRAL-Pro: Quartet-Based Species-Tree Inference despite Paralogy

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PartitionFinder: Combined Selection of Partitioning Schemes and Substitution Models for Phylogenetic Analyses

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Orthology Inference in Nonmodel Organisms Using Transcriptomes and Low-Coverage Genomes: Improving Accuracy and Matrix Occupancy for Phylogenomics

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UFBoot2: Improving the Ultrafast Bootstrap Approximation

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Analysis of Paralogs in Target Enrichment Data Pinpoints Multiple Ancient Polyploidy Events in Alchemilla s.l. (Rosaceae)

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The Consequences of Budding Speciation on Trees

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A Universal Probe Set for Targeted Sequencing of 353 Nuclear Genes from Any Flowering Plant Designed Using k-Medoids Clustering

inferredcites →https://doi.org/10.1101/2024.06.28.601132openalex-snapshot

Unravelling complex hybrid and polyploid evolutionary relationships using phylogenetic placement of paralogs from target enrichment data

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Lines in the land: a review of evidence for eastern Australia's major biogeographical barriers to closed forest taxa

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The influence of environment and life‐history traits on the distribution of genes and individuals: a comparative study of 11 rainforest trees

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Global rise in forest fire emissions linked to climate change in the extratropics

inferredcites →https://doi.org/10.11646/phytotaxa.383.3.4openalex-snapshot

A new species of Casearia (Samydoideae, Salicaceae) from South Africa

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Automated assessment reveals that the extinction risk of reptiles is widely underestimated across space and phylogeny

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When in Doubt, Put It in Flacourtiaceae: A Molecular Phylogenetic Analysis Based on Plastid rbcL DNA Sequences

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Identifying and Attributing Regime Shifts in Australian Fire Climates

inferredcites →https://doi.org/10.3390/ijms20153788openalex-snapshot

Intergeneric Relationships within the Family Salicaceae s.l. Based on Plastid Phylogenomics

inferredcites →https://doi.org/10.3732/apps.1600016openalex-snapshot

HybPiper: Extracting coding sequence and introns for phylogenetics from high‐throughput sequencing reads using target enrichment

inferredcites →https://doi.org/10.3897/bdj.8.e51094openalex-snapshot

Checklist of the vascular flora of the Sunda-Sahul Convergence Zone

inferredcites →https://doi.org/10.3897/zookeys.150.2109openalex-snapshot

Supporting Red List threat assessments with GeoCAT: geospatial conservation assessment tool

inferredcites →https://doi.org/10.5281/zenodo.21872039openalex-snapshot

Supplementary information for Cooper et al. (2026) Evolution and systematics of Australian Casearia Jacq. (Salicaceae), with two new species and one new subspecies described from North Queensland. Australian Systematic Botany.

inferredcites →https://doi.org/10.7717/peerj.1660openalex-snapshot

AMAS: a fast tool for alignment manipulation and computing of summary statistics

What points at this work

Incoming claims: where this work appears in other papers’ reference lists and arguments.

inferred← backgroundhttps://doi.org/10.5281/zenodo.21872040zenodo-depositor-declared

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