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Large-scale replicated field study of maize rhizosphere identifies heritable microbes

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What this work says

Outgoing claims: the papers this work cites, builds on, or argues with.

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The Diversity of Archaea and Bacteria in Association with the Roots of Zea mays L.

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Edaphic properties override the influence of crops on the composition of the soil bacterial community in a semiarid agroecosystem

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Structure and Function of the Bacterial Root Microbiota in Wild and Domesticated Barley

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Genome-wide Association Studies in Maize: Praise and Stargaze

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Plant genotype strongly modifies the structure and growth of maize rhizosphere microbial communities

inferredcites →https://doi.org/10.1016/j.soilbio.2014.09.001openalex-snapshot

Comparison of root system architecture and rhizosphere microbial communities of Balsas teosinte and domesticated corn cultivars

inferredcites →https://doi.org/10.1016/j.soilbio.2015.07.012openalex-snapshot

Can a diazotrophic endophyte originally isolated from lodgepole pine colonize an agricultural crop (corn) and promote its growth?

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The evolution of quantitative traits in complex environments

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Linking rhizosphere microbiome composition of wild and domesticated Phaseolus vulgaris to genotypic and root phenotypic traits

inferredcites →https://doi.org/10.1038/nature11336openalex-snapshot

Revealing structure and assembly cues for Arabidopsis root-inhabiting bacterial microbiota

inferredcites →https://doi.org/10.1038/ncomms12151openalex-snapshot

Host genotype and age shape the leaf and root microbiomes of a wild perennial plant

inferredcites →https://doi.org/10.1038/ng.2313openalex-snapshot

Maize HapMap2 identifies extant variation from a genome in flux

inferredcites →https://doi.org/10.1038/nmeth.f.303openalex-snapshot

QIIME allows analysis of high-throughput community sequencing data

inferredcites →https://doi.org/10.1038/nmicrobiol.2016.48openalex-snapshot

A new view of the tree of life

inferredcites →https://doi.org/10.1038/nrg2322openalex-snapshot

Heritability in the genomics era — concepts and misconceptions

inferredcites →https://doi.org/10.1038/nrmicro3109openalex-snapshot

Going back to the roots: the microbial ecology of the rhizosphere

inferredcites →https://doi.org/10.1073/pnas.1302837110openalex-snapshot

Diversity and heritability of the maize rhizosphere microbiome under field conditions

inferredcites →https://doi.org/10.1093/femsec/fiw242openalex-snapshot

Rhizosphere microbiomes of potato cultivated in the High Andes show stable and dynamic core microbiomes with different responses to plant development

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Rhizobacterial community structure differences among sorghum cultivars in different growth stages and soils

inferredcites →https://doi.org/10.1104/pp.97.2.523openalex-snapshot

Organ-Specific Invertase Deficiency in the Primary Root of an Inbred Maize Line

inferredcites →https://doi.org/10.1105/tpc.7.4.417openalex-snapshot

Characterization of the Maize Gene sugary1, a Determinant of Starch Composition in Kernels

inferredcites →https://doi.org/10.1111/1462-2920.12228openalex-snapshot

Host signature effect on plant root‐associated microbiomes revealed through analyses of resident vs . active communities

inferredcites →https://doi.org/10.1111/1462-2920.12442openalex-snapshot

Root microbiome relates to plant host evolution in maize and other P oaceae

inferredcites →https://doi.org/10.1111/j.1365-313x.2005.02591.xopenalex-snapshot

Maize association population: a high‐resolution platform for quantitative trait locus dissection

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Beyond the Venn diagram: the hunt for a core microbiome

inferredcites →https://doi.org/10.1111/j.1574-6941.2010.01025.xopenalex-snapshot

PhyloChip hybridization uncovered an enormous bacterial diversity in the rhizosphere of different potato cultivars: many common and few cultivar-dependent taxa

inferredcites →https://doi.org/10.1111/j.1574-6941.2011.01092.xopenalex-snapshot

Rice root-associated bacteria: insights into community structures across 10 cultivars

inferredcites →https://doi.org/10.1111/j.1751-7915.2012.00358.xopenalex-snapshot

Bacterial diversity in the rhizosphere of maize and the surrounding carbonate‐rich bulk soil

inferredcites →https://doi.org/10.1111/nyas.12396openalex-snapshot

Global maize production, utilization, and consumption

inferredcites →https://doi.org/10.1126/science.1174320openalex-snapshot

Genetic Properties of the Maize Nested Association Mapping Population

inferredcites →https://doi.org/10.1126/science.aaa8764openalex-snapshot

Salicylic acid modulates colonization of the root microbiome by specific bacterial taxa

inferredcites →https://doi.org/10.1371/journal.pgen.1004562openalex-snapshot

A Genome-Wide Association Study of the Maize Hypersensitive Defense Response Identifies Genes That Cluster in Related Pathways

inferredcites →https://doi.org/10.18637/jss.v067.i01openalex-snapshot

Fitting Linear Mixed-Effects Models Using lme4

inferredcites →https://doi.org/10.3389/fmicb.2014.00144openalex-snapshot

Effect of the soil type on the microbiome in the rhizosphere of field-grown lettuce

What points at this work

Incoming claims: where this work appears in other papers’ reference lists and arguments.

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Plant Microbiota: Diversity, Transmission and Function

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The Core Plant Microbiome: Roles, Functions, and Importance in Plant Health

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Recurrent and niche-specific functional bacteriome of maize hybrid revealed by integrated metabarcoding and culturomics

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inferred← citeshttps://doi.org/10.1016/j.catena.2021.105319openalex-snapshot

Rhizobacterial communities and crop development in response to long-term tillage practices in maize and soybean fields on the Loess Plateau of China

inferred← citeshttps://doi.org/10.1016/j.chemosphere.2020.127986openalex-snapshot

Cadmium level and soil type played a selective role in the endophytic bacterial community of hyperaccumulator Sedum alfredii Hance

inferred← citeshttps://doi.org/10.1016/j.chmed.2023.11.003openalex-snapshot

Rhizosphere microbial markers (micro-markers): A new physical examination indicator for traditional Chinese medicines

inferred← citeshttps://doi.org/10.1016/j.coisb.2023.100455openalex-snapshot

Evolutionary implications of host genetic control for engineering beneficial microbiomes

inferred← citeshttps://doi.org/10.1016/j.copbio.2021.05.007openalex-snapshot

Assessing the potential to harness the microbiome through plant genetics

inferred← citeshttps://doi.org/10.1016/j.copbio.2022.102808openalex-snapshot

Microbiome-based biotechnology for reducing food loss post harvest

inferred← citeshttps://doi.org/10.1016/j.cpb.2021.100228openalex-snapshot

Impacts of land-use and management histories of maize fields on the structure, composition, and metabolic potentials of microbial communities

inferred← citeshttps://doi.org/10.1016/j.crmicr.2024.100322openalex-snapshot

Rhizosphere microbiome regulation: Unlocking the potential for plant growth

inferred← citeshttps://doi.org/10.1016/j.csbj.2021.09.035openalex-snapshot

Rhizosphere microbiome: Functional compensatory assembly for plant fitness

inferred← citeshttps://doi.org/10.1016/j.cub.2023.03.068openalex-snapshot

Plant–microbe interactions: Mining heritable root-associated microbiota across environments

inferred← citeshttps://doi.org/10.1016/j.cub.2023.03.078openalex-snapshot

Genetic determinants of switchgrass-root-associated microbiota in field sites spanning its natural range

inferred← citeshttps://doi.org/10.1016/j.cub.2025.07.010openalex-snapshot

Chitooligosaccharide receptors modulate root microbiota to enhance symbiosis and growth in Medicago

inferred← citeshttps://doi.org/10.1016/j.egg.2023.100195openalex-snapshot

Bacterial community structure and predicted function in the rhizosphere of wild and cultivated date palms: Effects of Fertilizers on Composition and Functionality

inferred← citeshttps://doi.org/10.1016/j.eja.2021.126343openalex-snapshot

Analyses of genetic variability and genotype x cyanobacteria interactions in biofortified maize (Zea mays L.) for their responses to plant growth and physiological attributes

inferred← citeshttps://doi.org/10.1016/j.ejsobi.2026.103811openalex-snapshot

Functional divergence in the rhizosphere microbiome of Codonopsis pilosula drives a soil carbon allocation trade-off

inferred← citeshttps://doi.org/10.1016/j.envexpbot.2022.104933openalex-snapshot

Deciphering the plant microbiome to improve drought tolerance: Mechanisms and perspectives

inferred← citeshttps://doi.org/10.1016/j.envint.2019.104975openalex-snapshot

Assembly of root-associated microbiomes of typical rice cultivars in response to lindane pollution

inferred← citeshttps://doi.org/10.1016/j.envpol.2026.129188openalex-snapshot

Rhizosphere microbiome-mediated aluminum detoxification in acidic soils: From microbial mechanisms to microecology-based management

inferred← citeshttps://doi.org/10.1016/j.fochx.2026.104596openalex-snapshot

Integrated metabolomics and microbiome analyses reveal nutritional differences between yellow and white maize (Zea mays L.) kernels

inferred← citeshttps://doi.org/10.1016/j.foreco.2026.123521openalex-snapshot

Dominant vegetation effect on microbial diversity and composition in a mosaic Mediterranean forest

inferred← citeshttps://doi.org/10.1016/j.forsciint.2021.110782openalex-snapshot

A pilot study characterizing gravesoil bacterial communities a decade after swine decomposition

inferred← citeshttps://doi.org/10.1016/j.geoderma.2024.117160openalex-snapshot

Reseeding promotes plant biomass by improving microbial community stability and soil fertility in a degraded subalpine grassland

inferred← citeshttps://doi.org/10.1016/j.horiz.2025.100161openalex-snapshot

Phyllosphere microbiota and metabolomic insights of sewage sludge-derived biostimulant in enhancing nutritional quality and disease resistance of Pakchoi cabbage

inferred← citeshttps://doi.org/10.1016/j.jafr.2026.103359openalex-snapshot

Integrated microbiome and green technologies for sustainable rice production: Current advances, challenges and future perspectives

inferred← citeshttps://doi.org/10.1016/j.jenvman.2025.125341openalex-snapshot

Fugitive gases reduction and carbon sequestration potential of ecological floating beds

inferred← citeshttps://doi.org/10.1016/j.jgg.2024.10.007openalex-snapshot

Genetic and molecular mechanisms underlying nitrogen use efficiency in maize

inferred← citeshttps://doi.org/10.1016/j.jhazmat.2022.129959openalex-snapshot

Bioplastic (PHBV) addition to soil alters microbial community structure and negatively affects plant-microbial metabolic functioning in maize

inferred← citeshttps://doi.org/10.1016/j.jhazmat.2023.131948openalex-snapshot

Nanopesticide risk assessment based on microbiome profiling – Community structure and functional potential as biomarkers in captan@ZnO35–45 nm and captan@SiO2 20–30 nm treated orchard soil

inferred← citeshttps://doi.org/10.1016/j.jia.2022.08.043openalex-snapshot

Green manuring facilitates bacterial community dispersal across different compartments of subsequent tobacco

inferred← citeshttps://doi.org/10.1016/j.mec.2019.e00102openalex-snapshot

Targeted enzyme gene re-positioning: A computational approach for discovering alternative bacterial enzymes for the synthesis of plant-specific secondary metabolites

inferred← citeshttps://doi.org/10.1016/j.meegid.2026.105941openalex-snapshot

Integrating metagenomics into legume breeding: A breeder-centered roadmap from core microbiomes to precision inoculation

inferred← citeshttps://doi.org/10.1016/j.mib.2019.09.008openalex-snapshot

Abundance-occupancy distributions to prioritize plant core microbiome membership

inferred← citeshttps://doi.org/10.1016/j.mib.2019.09.013openalex-snapshot

Tracing the evolutionary routes of plant–microbiota interactions

inferred← citeshttps://doi.org/10.1016/j.mib.2019.10.010openalex-snapshot

Reductionist synthetic community approaches in root microbiome research

inferred← citeshttps://doi.org/10.1016/j.mib.2023.102268openalex-snapshot

Host genetics regulate the plant microbiome

inferred← citeshttps://doi.org/10.1016/j.mib.2025.102664openalex-snapshot

Transient microbial architects: tracing the legacy effects of ephemeral taxa during plant microbiome assembly

inferred← citeshttps://doi.org/10.1016/j.micres.2021.126901openalex-snapshot

Rhizospheric microbiome: Bio-based emerging strategies for sustainable agriculture development and future perspectives

inferred← citeshttps://doi.org/10.1016/j.molp.2019.05.006openalex-snapshot

Systems Biology of Plant-Microbiome Interactions

inferred← citeshttps://doi.org/10.1016/j.molp.2021.06.029openalex-snapshot

Unconventional routes to developing insect-resistant crops

inferred← citeshttps://doi.org/10.1016/j.ncrops.2023.11.002openalex-snapshot

Insights into plant–microbe interactions in the rhizosphere to promote sustainable agriculture in the new crops era

inferred← citeshttps://doi.org/10.1016/j.pbi.2020.02.010openalex-snapshot

Bacterial dispersal and biogeography as underappreciated influences on phytobiomes

inferred← citeshttps://doi.org/10.1016/j.pbi.2021.102034openalex-snapshot

Untapping the potential of plant mycobiomes for applications in agriculture

inferred← citeshttps://doi.org/10.1016/j.plaphy.2023.02.022openalex-snapshot

Integrating nanotechnology with plant microbiome for next-generation crop health

inferred← citeshttps://doi.org/10.1016/j.plaphy.2026.111626openalex-snapshot

Wheat microbiome interactions under climate change: Mechanisms of abiotic stress tolerance and sustainable crop resilience

inferred← citeshttps://doi.org/10.1016/j.pmpp.2025.102753openalex-snapshot

Bacillus species suppress Pratylenchus in roots and shape the bacterial community in the rhizosphere of lima bean

inferred← citeshttps://doi.org/10.1016/j.rhisph.2018.11.004openalex-snapshot

Maize plant growth response to whole rhizosphere microbial communities in different mineral N and P fertilization scenarios

inferred← citeshttps://doi.org/10.1016/j.rhisph.2022.100517openalex-snapshot

Megathyrsus maximus and Brachiaria decumbens improve soil characteristics and select promising rhizobacteria during rhizoremediation of petroleum hydrocarbons

inferred← citeshttps://doi.org/10.1016/j.rhisph.2022.100631openalex-snapshot

Assembly between wheat cultivars and soil microorganisms modulates phosphorus and water use efficiency

inferred← citeshttps://doi.org/10.1016/j.rhisph.2024.100971openalex-snapshot

Physicochemical properties of acid sulphate soil profoundly influence the composition of rhizobacterial community of rice (Oryza sativa L.)

inferred← citeshttps://doi.org/10.1016/j.rhisph.2025.101241openalex-snapshot

Shovelomics meets microbiomics: root phenotype-microbiome associations and links with maize yield under nitrogen limitation

inferred← citeshttps://doi.org/10.1016/j.rhisph.2026.101305openalex-snapshot

Nutrient heterogeneity shapes bacterial diversity and functions in wheat fields of the Lower Indo-Gangetic Plain

inferred← citeshttps://doi.org/10.1016/j.sajb.2021.06.035openalex-snapshot

A consortium of cyanobacteria and plant growth promoting rhizobacteria for wheat growth improvement in a hydroponic system

inferred← citeshttps://doi.org/10.1016/j.sciaf.2022.e01212openalex-snapshot

Functional diversity of bacterial communities in the rhizosphere of maize grown on a soil under organic and inorganic fertilization

inferred← citeshttps://doi.org/10.1016/j.scienta.2020.109480openalex-snapshot

Cross-competence and affectivity of maize rhizosphere bacteria Bacillus sp. MT7 in tomato rhizosphere

inferred← citeshttps://doi.org/10.1016/j.scitotenv.2021.149118openalex-snapshot

Bacterial community demonstrates stronger network connectivity than fungal community in desert-grassland salt marsh

inferred← citeshttps://doi.org/10.1016/j.scitotenv.2021.152223openalex-snapshot

The effects of biochar soil amendment on rice growth may vary greatly with rice genotypes

inferred← citeshttps://doi.org/10.1016/j.scitotenv.2023.168216openalex-snapshot

Rare and abundant bacterial communities in poplar rhizosphere soils respond differently to genetic effects

inferred← citeshttps://doi.org/10.1016/j.scitotenv.2024.172654openalex-snapshot

Diversity and growth-promoting characteristics of rhizosphere bacteria of three naturally growing plants at the sand iron ore restoration area in Qinghe County

inferred← citeshttps://doi.org/10.1016/j.scitotenv.2025.178413openalex-snapshot

Recruitment of specific rhizosphere microorganisms in saline-alkali tolerant rice improves adaptation to saline-alkali stress

inferred← citeshttps://doi.org/10.1016/j.soilbio.2019.05.020openalex-snapshot

Impacts of long-term plant residue management on soil organic matter quality, Pseudomonas community structure and disease suppressiveness

inferred← citeshttps://doi.org/10.1016/j.soilbio.2020.107794openalex-snapshot

Impacts of directed evolution and soil management legacy on the maize rhizobiome

inferred← citeshttps://doi.org/10.1016/j.soilbio.2020.107968openalex-snapshot

Functional compensation dominates the assembly of plant rhizospheric bacterial community

inferred← citeshttps://doi.org/10.1016/j.soilbio.2021.108309openalex-snapshot

Rhizosphere microbial communities explain positive effects of diverse crop rotations on maize and soybean performance

inferred← citeshttps://doi.org/10.1016/j.soilbio.2023.109026openalex-snapshot

Responses of root architecture and the rhizosphere microbiome assembly of maize (Zea mays L.) to a soil texture gradient

inferred← citeshttps://doi.org/10.1016/j.still.2025.106477openalex-snapshot

Mechanisms of tomato growth promotion in three soils after applying Bacillus combinations

inferred← citeshttps://doi.org/10.1016/j.stress.2025.100973openalex-snapshot

Unraveling the nexus of drought stress and rice physiology: mechanisms, mitigation, and sustainable cultivation

inferred← citeshttps://doi.org/10.1016/j.stress.2026.101531openalex-snapshot

Plant immunity-microbiome interactions: Assembly, stress adaptation, and translation

inferred← citeshttps://doi.org/10.1016/j.temicr.2026.100098openalex-snapshot

Plant holobionts in a changing climate: Genome–microbiome integration for sustainable food systems

inferred← citeshttps://doi.org/10.1016/j.tim.2024.04.008openalex-snapshot

C4 cereal and biofuel crop microbiomes

inferred← citeshttps://doi.org/10.1016/j.tim.2024.11.011openalex-snapshot

Microbiome selection and evolution within wild and domesticated plants

inferred← citeshttps://doi.org/10.1016/j.tplants.2024.07.018openalex-snapshot

Molecular concepts to explain heterosis in crops

inferred← citeshttps://doi.org/10.1016/j.tplants.2025.02.003openalex-snapshot

Navigating nitrogen sustainability with microbiome-associated phenotypes

inferred← citeshttps://doi.org/10.1016/j.tplants.2025.04.004openalex-snapshot

Exploitation of rhizosphere microbiome biodiversity in plant breeding

inferred← citeshttps://doi.org/10.1016/j.tree.2020.04.001openalex-snapshot

Plant Secondary Compounds in Soil and Their Role in Belowground Species Interactions

inferred← citeshttps://doi.org/10.1016/j.tree.2025.07.002openalex-snapshot

Do rhizosphere microbiomes match root functional traits?

inferred← citeshttps://doi.org/10.1016/j.xplc.2021.100228openalex-snapshot

Improving crop drought resistance with plant growth regulators and rhizobacteria: Mechanisms, applications, and perspectives

inferred← citeshttps://doi.org/10.1016/j.xplc.2024.100812openalex-snapshot

Rational management of the plant microbiome for the Second Green Revolution

inferred← citeshttps://doi.org/10.1016/s1002-0160(21)60022-xopenalex-snapshot

Integrated analysis reveals an association between the rhizosphere microbiome and root rot of arecanut palm

inferred← citeshttps://doi.org/10.1017/9781108654418.009openalex-snapshot

Microbial biotechnology

inferred← citeshttps://doi.org/10.1021/acs.est.3c05678openalex-snapshot

Seeds Act as Vectors for Antibiotic Resistance Gene Dissemination in a Soil-Plant Continuum

inferred← citeshttps://doi.org/10.1021/acs.est.5c05925openalex-snapshot

Building Predictive Understanding of the Activated Sludge Microbiome by Bridging Microbial Growth Kinetics and Microbial Population Dynamics

inferred← citeshttps://doi.org/10.1021/acs.jafc.0c00073openalex-snapshot

Rhizosphere Microbiome Assembly and Its Impact on Plant Growth

inferred← citeshttps://doi.org/10.1021/acssuschemeng.5c03646openalex-snapshot

Synergistic Roles of Plant–Microbe Interactions and Soil Aggregate Dynamics in the Phytostabilization of Ion-Adsorption Rare Earth Tailings

inferred← citeshttps://doi.org/10.1038/nbt.4232openalex-snapshot

Rhizosphere microbiome structure alters to enable wilt resistance in tomato

inferred← citeshttps://doi.org/10.1038/s41396-019-0477-xopenalex-snapshot

Local biotic interactions drive species-specific divergence in soil bacterial communities

inferred← citeshttps://doi.org/10.1038/s41396-020-00812-xopenalex-snapshot

Host specificity of microbiome assembly and its fitness effects in phytoplankton

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