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Analysis of CD8 + T cell response during the 2013–2016 Ebola epidemic in West Africa

https://doi.org/10.1073/pnas.1806200115
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What this work says

Outgoing claims: the papers this work cites, builds on, or argues with.

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The Role of Cytotoxic T Lymphocytes in Infectious Disease: History, Criteria, and State of the Art
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NetMHCpan, a method for MHC class I binding prediction beyond humans
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Ebola’s Curse
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Ebola Virus Epidemiology, Transmission, and Evolution during Seven Months in Sierra Leone
inferredcites →https://doi.org/10.1016/j.jim.2011.09.016openalex-snapshot
Use of replication restricted recombinant vesicular stomatitis virus vectors for detection of antigen-specific T cells
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Generation of VSV pseudotypes using recombinant ΔG-VSV for studies on virus entry, identification of entry inhibitors, and immune responses to vaccines
inferredcites →https://doi.org/10.1016/j.tibtech.2006.10.001openalex-snapshot
The validity of predicted T-cell epitopes
inferredcites →https://doi.org/10.1016/s0140-6736(15)61042-xopenalex-snapshot
ReEBOV Antigen Rapid Test kit for point-of-care and laboratory-based testing for Ebola virus disease: a field validation study
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Efficacy and effectiveness of an rVSV-vectored vaccine expressing Ebola surface glycoprotein: interim results from the Guinea ring vaccination cluster-randomised trial
inferredcites →https://doi.org/10.1021/acs.jmedchem.6b01594openalex-snapshot
Discovery and Synthesis of a Phosphoramidate Prodrug of a Pyrrolo[2,1-f][triazin-4-amino] Adenine C-Nucleoside (GS-5734) for the Treatment of Ebola and Emerging Viruses
inferredcites →https://doi.org/10.1034/j.1399-0039.2003.00112.xopenalex-snapshot
Sensitive quantitative predictions of peptide‐MHC binding by a ‘Query by Committee’ artificial neural network approach
inferredcites →https://doi.org/10.1038/7422openalex-snapshot
Defective humoral responses and extensive intravascular apoptosis are associated with fatal outcome in Ebola virus-infected patients
inferredcites →https://doi.org/10.1038/nature19790openalex-snapshot
The evolution of Ebola virus: Insights from the 2013–2016 epidemic
inferredcites →https://doi.org/10.1038/nbt1215openalex-snapshot
A consensus epitope prediction approach identifies the breadth of murine TCD8+-cell responses to vaccinia virus
inferredcites →https://doi.org/10.1038/nm.2447openalex-snapshot
CD8+ cellular immunity mediates rAd5 vaccine protection against Ebola virus infection of nonhuman primates
inferredcites →https://doi.org/10.1056/nejmoa1604330openalex-snapshot
A Randomized, Controlled Trial of ZMapp for Ebola Virus Infection
inferredcites →https://doi.org/10.1073/pnas.1209591110openalex-snapshot
Antibodies are necessary for rVSV/ZEBOV-GP–mediated protection against lethal Ebola virus challenge in nonhuman primates
inferredcites →https://doi.org/10.1073/pnas.1502619112openalex-snapshot
Human Ebola virus infection results in substantial immune activation
inferredcites →https://doi.org/10.1073/pnas.89.7.2752openalex-snapshot
A common antiviral cytotoxic T-lymphocyte epitope for diverse major histocompatibility complex haplotypes: implications for vaccination.
inferredcites →https://doi.org/10.1084/jem.145.3.644openalex-snapshot
Antiviral protection by virus-immune cytotoxic T cells: infected target cells are lysed before infectious virus progeny is assembled.
inferredcites →https://doi.org/10.1093/acprof:oso/9780190624477.001.0001openalex-snapshot
The Politics of Fear
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Accurate approximation method for prediction of class I MHC affinities for peptides of length 8, 10 and 11 using prediction tools trained on 9mers
inferredcites →https://doi.org/10.1093/bioinformatics/btv639openalex-snapshot
Gapped sequence alignment using artificial neural networks: application to the MHC class I system
inferredcites →https://doi.org/10.1093/cid/civ334openalex-snapshot
The Use of TKM-100802 and Convalescent Plasma in 2 Patients With Ebola Virus Disease in the United States
inferredcites →https://doi.org/10.1093/cid/ciw334openalex-snapshot
Kinetic Analysis of Biomarkers in a Cohort of US Patients With Ebola Virus Disease
inferredcites →https://doi.org/10.1093/cid/ciy765openalex-snapshot
Ebola’s Curse: 2013–2016 Outbreak in West Africa
inferredcites →https://doi.org/10.1093/infdis/jiw239openalex-snapshot
An Outbreak of Ebola Virus Disease in the Lassa Fever Zone
inferredcites →https://doi.org/10.1093/infdis/jiw261openalex-snapshot
Field Validation of the ReEBOV Antigen Rapid Test for Point-of-Care Diagnosis of Ebola Virus Infection
inferredcites →https://doi.org/10.1093/infdis/jiw293openalex-snapshot
Analytical Validation of the ReEBOV Antigen Rapid Test for Point-of-Care Diagnosis of Ebola Virus Infection
inferredcites →https://doi.org/10.1093/nar/gkn202openalex-snapshot
NetMHC-3.0: accurate web accessible predictions of human, mouse and monkey MHC class I affinities for peptides of length 8–11
inferredcites →https://doi.org/10.1093/nar/gku938openalex-snapshot
The immune epitope database (IEDB) 3.0
inferredcites →https://doi.org/10.1110/ps.0239403openalex-snapshot
Reliable prediction of T‐cell epitopes using neural networks with novel sequence representations
inferredcites →https://doi.org/10.1126/science.1259657openalex-snapshot
Genomic surveillance elucidates Ebola virus origin and transmission during the 2014 outbreak
inferredcites →https://doi.org/10.1128/jvi.67.1.348-352.1993openalex-snapshot
A "string-of-beads" vaccine, comprising linked minigenes, confers protection from lethal-dose virus challenge
inferredcites →https://doi.org/10.1146/annurev-virology-110615-040056openalex-snapshot
Epidemiology and Management of the 2013–16 West African Ebola Outbreak
inferredcites →https://doi.org/10.1186/1471-2105-6-132openalex-snapshot
Generating quantitative models describing the sequence specificity of biological processes with the stabilized matrix method
inferredcites →https://doi.org/10.1186/1745-7580-4-2openalex-snapshot
Quantitative peptide binding motifs for 19 human and mouse MHC class I molecules derived using positional scanning combinatorial peptide libraries
inferredcites →https://doi.org/10.1186/s13073-016-0288-xopenalex-snapshot
NetMHCpan-3.0; improved prediction of binding to MHC class I molecules integrating information from multiple receptor and peptide length datasets
inferredcites →https://doi.org/10.1371/journal.pone.0000796openalex-snapshot
NetMHCpan, a Method for Quantitative Predictions of Peptide Binding to Any HLA-A and -B Locus Protein of Known Sequence
inferredcites →https://doi.org/10.1371/journal.pone.0118881openalex-snapshot
Homologous and Heterologous Protection of Nonhuman Primates by Ebola and Sudan Virus-Like Particles
inferredcites →https://doi.org/10.1371/journal.ppat.0030009openalex-snapshot
Neutralizing Antibody Fails to Impact the Course of Ebola Virus Infection in Monkeys

What points at this work

Incoming claims: where this work appears in other papers’ reference lists and arguments.

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inferred← citeshttps://doi.org/10.1007/s00430-019-00584-yopenalex-snapshot
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Characterization of Antigenic MHC-Class-I-Restricted T Cell Epitopes in the Glycoprotein of Ebolavirus
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Multiple viral proteins and immune response pathways act to generate robust long-term immunity in Sudan virus survivors
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Resilience and residuals beyond containment — The hidden burden of Bundibugyo Ebola virus survivorship sixteen years on: A cross-sectional observational study
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Newly identified oncolytic VSV-GP-specific CD8+ T cell epitopes for monitoring of anti-viral immune responses in the BALB/c mouse model
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An effective CTL peptide vaccine for Ebola Zaire Based on Survivors’ CD8+ targeting of a particular nucleocapsid protein epitope with potential implications for COVID-19 vaccine design
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Immunization with a small fragment of the Schmallenberg virus nucleoprotein highly conserved across the Orthobunyaviruses of the Simbu serogroup reduces viremia in SBV challenged IFNAR-/- mice
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Self-amplifying RNA vaccine protects mice against lethal Ebola virus infection
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RBD-Modified Bacterial Vesicles Elicited Potential Protective Immunity against SARS-CoV-2
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Large-scale mapping of the Ebola NP and GP proteins reveals multiple immunoprevalent and conserved CD4 T-cell epitopes
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Characterisation of the T-cell response to Ebola virus glycoprotein amongst survivors of the 2013–16 West Africa epidemic
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Pathogenicity and Virulence of Ebolaviruses with Species- and Variant-specificity
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Distinct transcriptional responses to fatal Ebola virus infection in cynomolgus and rhesus macaques suggest species-specific immune responses
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A comprehensive review and performance evaluation of bioinformatics tools for HLA class I peptide-binding prediction
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Ebola-Specific CD8+ and CD4+ T-Cell Responses in Sierra Leonean Ebola Virus Survivors With or Without Post-Ebola Sequelae
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Long-term Sudan Virus Ebola Survivors Maintain Multiple Antiviral Defense Mechanisms
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Survivors of Ebola Virus Disease Develop Polyfunctional Antibody Responses
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Characterisation of antigenic MHC Class I-restricted T cell epitopes in the glycoprotein of Ebolavirus
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Single-dose mucosal replicon-particle vaccine protects against lethal Nipah virus infection up to 3 days after vaccination
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Identification of Common CD8+T Cell Epitopes from Lassa Fever Survivors in Nigeria and Sierra Leone
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EnhancedIn VitroandIn VivoPotency of a T Cell Epitope in the Ebola Virus Glycoprotein Following Amino Acid Replacement at HLA-A*02:01 Binding Positions
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Molecular Engineering of a Mammarenavirus with Unbreachable Attenuation
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A Bivalent, Spherical Virus-Like Particle Vaccine Enhances Breadth of Immune Responses against Pathogenic Ebola Viruses in Rhesus Macaques
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Immune responses in multiple hosts to Nucleocapsid Protein (NP) of Crimean-Congo Hemorrhagic Fever Virus (CCHFV)
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Expansion of CD8+ T cell population in Lassa virus survivors with low T cell precursor frequency reveals durable immune response in most survivors
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A systematic review of the immuno-inflammatory dysfunction secondary to viral hemorrhagic fevers; Ebola and Lassa fever
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