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An overview of graph databases and their applications in the biomedical domain
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What this work says
Outgoing claims: the papers this work cites, builds on, or argues with.
inferredcites →https://doi.org/10.1002/0471250953.bi0902s00openalex-snapshot
Structured Query Language ( SQL ) Fundamentals
inferredcites →https://doi.org/10.1007/978-0-230-37405-8_1openalex-snapshot
Introduction to algorithms
inferredcites →https://doi.org/10.1007/978-0-387-48438-9openalex-snapshot
Semantic Web: Revolutionizing Knowledge Discovery in the Life Sciences
inferredcites →https://doi.org/10.1007/978-0-387-48438-9_14openalex-snapshot
Ontology Design for Biomedical Text Mining
inferredcites →https://doi.org/10.1007/978-1-4302-1573-8_3openalex-snapshot
An Introduction to Relational Database Theory
inferredcites →https://doi.org/10.1007/978-1-4939-6783-4_1openalex-snapshot
Protein Bioinformatics Databases and Resources
inferredcites →https://doi.org/10.1007/978-1-60327-241-4_9openalex-snapshot
Databases of Protein–Protein Interactions and Complexes
inferredcites →https://doi.org/10.1007/978-3-642-05151-7openalex-snapshot
On the Move to Meaningful Internet Systems: OTM 2009
inferredcites →https://doi.org/10.1007/978-3-642-16720-1_4openalex-snapshot
Survey of Graph Database Performance on the HPC Scalable Graph Analysis Benchmark
inferredcites →https://doi.org/10.1007/978-3-642-16949-6_5openalex-snapshot
On the Expressiveness and Trade-Offs of Large Scale Tuple Stores
inferredcites →https://doi.org/10.1007/978-94-007-6818-5_44openalex-snapshot
An Integrated Approach Based on 2-Tuple Fuzzy Representation and QFD for Supplier Selection
inferredcites →https://doi.org/10.1007/978-981-10-7347-2openalex-snapshot
Protein-Protein and Domain-Domain Interactions
inferredcites →https://doi.org/10.1007/978-981-10-7347-2_9openalex-snapshot
Databases for Protein-Protein Interaction
inferredcites →https://doi.org/10.1007/978-981-16-8048-9openalex-snapshot
Advances in Intelligent Systems and Computing
inferredcites →https://doi.org/10.1007/s002360050048openalex-snapshot
The log-structured merge-tree (LSM-tree)
inferredcites →https://doi.org/10.1007/s10270-019-00739-8openalex-snapshot
Design methods for the new database era: a systematic literature review
inferredcites →https://doi.org/10.1007/s41019-019-00110-3openalex-snapshot
Which Category Is Better: Benchmarking Relational and Graph Database Management Systems
inferredcites →https://doi.org/10.1016/j.artmed.2019.04.001openalex-snapshot
Detection of protein complexes from multiple protein interaction networks using graph embedding
inferredcites →https://doi.org/10.1016/j.bbe.2014.06.002openalex-snapshot
Biomedical ontologies—A review
inferredcites →https://doi.org/10.1016/j.csbj.2020.05.017openalex-snapshot
Constructing knowledge graphs and their biomedical applications
inferredcites →https://doi.org/10.1016/j.eswa.2019.112948openalex-snapshot
A review: Knowledge reasoning over knowledge graph
inferredcites →https://doi.org/10.1016/j.pbiomolbio.2004.01.004openalex-snapshot
CellML: its future, present and past
inferredcites →https://doi.org/10.1016/s0076-6879(96)66012-1openalex-snapshot
[10] Entrez: Molecular biology database and retrieval system
inferredcites →https://doi.org/10.1021/acs.jmedchem.7b00809openalex-snapshot
The Fragment Network: A Chemistry Recommendation Engine Built Using a Graph Database
inferredcites →https://doi.org/10.1038/nbt.1558openalex-snapshot
The Systems Biology Graphical Notation
inferredcites →https://doi.org/10.1038/nbt.2488openalex-snapshot
A community-driven global reconstruction of human metabolism
inferredcites →https://doi.org/10.1038/nbt.4072openalex-snapshot
Recon3D enables a three-dimensional view of gene variation in human metabolism
inferredcites →https://doi.org/10.1038/nbt1346openalex-snapshot
The OBO Foundry: coordinated evolution of ontologies to support biomedical data integration
inferredcites →https://doi.org/10.1038/nmeth.2212openalex-snapshot
A travel guide to Cytoscape plugins
inferredcites →https://doi.org/10.1038/srep19264openalex-snapshot
Psmir: a database of potential associations between small molecules and miRNAs
inferredcites →https://doi.org/10.1089/cmb.2016.0095openalex-snapshot
EpiGeNet: A Graph Database of Interdependencies Between Genetic and Epigenetic Events in Colorectal Cancer
inferredcites →https://doi.org/10.1093/bib/bbs058openalex-snapshot
Reconciliation of metabolites and biochemical reactions for metabolic networks
inferredcites →https://doi.org/10.1093/bioinformatics/btg015openalex-snapshot
The systems biology markup language (SBML): a medium for representation and exchange of biochemical network models
inferredcites →https://doi.org/10.1093/bioinformatics/btt549openalex-snapshot
Are graph databases ready for bioinformatics?
inferredcites →https://doi.org/10.1093/bioinformatics/btv460openalex-snapshot
cyNeo4j: connecting Neo4j and Cytoscape
inferredcites →https://doi.org/10.1093/bioinformatics/btw731openalex-snapshot
Recon2Neo4j: applying graph database technologies for managing comprehensive genome-scale networks
inferredcites →https://doi.org/10.1093/bioinformatics/btx397openalex-snapshot
Pheno4J: a gene to phenotype graph database
inferredcites →https://doi.org/10.1093/database/baaa064openalex-snapshot
A content-based dataset recommendation system for researchers—a case study on Gene Expression Omnibus (GEO) repository
inferredcites →https://doi.org/10.1093/database/bau130openalex-snapshot
Combining computational models, semantic annotations and simulation experiments in a graph database
inferredcites →https://doi.org/10.1093/database/bay086openalex-snapshot
Spfy: an integrated graph database for real-time prediction of bacterial phenotypes and downstream comparative analyses
inferredcites →https://doi.org/10.1093/database/baz162openalex-snapshot
GREG—studying transcriptional regulation using integrative graph databases
inferredcites →https://doi.org/10.1093/nar/27.1.29openalex-snapshot
KEGG: Kyoto Encyclopedia of Genes and Genomes
inferredcites →https://doi.org/10.1093/nar/28.1.27openalex-snapshot
KEGG: Kyoto Encyclopedia of Genes and Genomes
inferredcites →https://doi.org/10.1093/nar/gkh086openalex-snapshot
The Database of Interacting Proteins: 2004 update
inferredcites →https://doi.org/10.1093/nar/gkp878openalex-snapshot
The IntAct molecular interaction database in 2010
inferredcites →https://doi.org/10.1093/nar/gkq1056openalex-snapshot
starBase: a database for exploring microRNA–mRNA interaction maps from Argonaute CLIP-Seq and Degradome-Seq data
inferredcites →https://doi.org/10.1093/nar/gkr972openalex-snapshot
Disease Ontology: a backbone for disease semantic integration
inferredcites →https://doi.org/10.1093/nar/gks1094openalex-snapshot
STRING v9.1: protein-protein interaction networks, with increased coverage and integration
inferredcites →https://doi.org/10.1093/nar/gkt1026openalex-snapshot
The Human Phenotype Ontology project: linking molecular biology and disease through phenotype data
inferredcites →https://doi.org/10.1093/nar/gku989openalex-snapshot
UniProt: a hub for protein information
inferredcites →https://doi.org/10.1093/nar/gkv1031openalex-snapshot
ChEBI in 2016: Improved services and an expanding collection of metabolites
inferredcites →https://doi.org/10.1093/nar/gkv1094openalex-snapshot
Lnc2Cancer: a manually curated database of experimentally supported lncRNAs associated with various human cancers
inferredcites →https://doi.org/10.1093/nar/gkv1351openalex-snapshot
The Reactome pathway Knowledgebase
inferredcites →https://doi.org/10.1093/nar/gkv233openalex-snapshot
Identification of lncRNA-associated competing triplets reveals global patterns and prognostic markers for cancer
inferredcites →https://doi.org/10.1093/nar/gkw1012openalex-snapshot
MalaCards: an amalgamated human disease compendium with diverse clinical and genetic annotation and structured search
inferredcites →https://doi.org/10.1093/nar/gkw1128openalex-snapshot
The Monarch Initiative: an integrative data and analytic platform connecting phenotypes to genotypes across species
inferredcites →https://doi.org/10.1093/nar/gkw937openalex-snapshot
The STRING database in 2017: quality-controlled protein–protein association networks, made broadly accessible
inferredcites →https://doi.org/10.1093/nar/gkw943openalex-snapshot
DisGeNET: a comprehensive platform integrating information on human disease-associated genes and variants
inferredcites →https://doi.org/10.1093/nar/gkw990openalex-snapshot
Updates in Rhea – an expert curated resource of biochemical reactions
inferredcites →https://doi.org/10.1093/nar/gkx1037openalex-snapshot
DrugBank 5.0: a major update to the DrugBank database for 2018
inferredcites →https://doi.org/10.1093/nar/gkx1132openalex-snapshot
The Reactome Pathway Knowledgebase
inferredcites →https://doi.org/10.1093/nar/gkx750openalex-snapshot
Network embedding-based representation learning for single cell RNA-seq data
inferredcites →https://doi.org/10.1093/nar/gky1079openalex-snapshot
The BioGRID interaction database: 2019 update
inferredcites →https://doi.org/10.1093/pcp/pcv200openalex-snapshot
HRGRN: A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks
inferredcites →https://doi.org/10.1101/gr.1239303openalex-snapshot
Cytoscape: A Software Environment for Integrated Models of Biomolecular Interaction Networks
inferredcites →https://doi.org/10.1109/5254.747902openalex-snapshot
What are ontologies, and why do we need them?
inferredcites →https://doi.org/10.1109/dexa.2015.59openalex-snapshot
Using Neo4j for Mining Protein Graphs: A Case Study
inferredcites →https://doi.org/10.1109/ipdpsw.2019.00054openalex-snapshot
RedisGraph GraphBLAS Enabled Graph Database
inferredcites →https://doi.org/10.1109/itnec.2019.8729264openalex-snapshot
SQL Database with physical database tuning technique and NoSQL graph database comparisons
inferredcites →https://doi.org/10.1109/mic.2019.2928449openalex-snapshot
Knowledge Graphs and Knowledge Networks: The Story in Brief
inferredcites →https://doi.org/10.1109/mitp.2017.4241475openalex-snapshot
The Graph Database: Jack of All Trades or Just Not SQL?
inferredcites →https://doi.org/10.1109/socialcom.2013.106openalex-snapshot
An Empirical Comparison of Graph Databases
inferredcites →https://doi.org/10.1109/tkde.2017.2754499openalex-snapshot
Knowledge Graph Embedding: A Survey of Approaches and Applications
inferredcites →https://doi.org/10.1109/u-media.2014.27openalex-snapshot
Correlation Aware Technique for SQL to NoSQL Transformation
inferredcites →https://doi.org/10.1136/amiajnl-2011-000523openalex-snapshot
The National Center for Biomedical Ontology
inferredcites →https://doi.org/10.1137/1.9781611972740openalex-snapshot
Proceedings of the 2004 SIAM International Conference on Data Mining
inferredcites →https://doi.org/10.1145/1322432.1322433openalex-snapshot
Survey of graph database models
inferredcites →https://doi.org/10.1145/1900008.1900067openalex-snapshot
A comparison of a graph database and a relational database
inferredcites →https://doi.org/10.1145/2627692.2627697openalex-snapshot
The linked data benchmark council
inferredcites →https://doi.org/10.1145/2723372.2742786openalex-snapshot
The LDBC Social Network Benchmark
inferredcites →https://doi.org/10.1145/276304openalex-snapshot
Proceedings of the 1998 ACM SIGMOD international conference on Management of data
inferredcites →https://doi.org/10.1145/2815072.2815073openalex-snapshot
The Gremlin graph traversal machine and language (invited talk)
inferredcites →https://doi.org/10.1145/3041957openalex-snapshot
Business Process Variability Modeling
inferredcites →https://doi.org/10.1145/3078447.3078459openalex-snapshot
Do We Need Specialized Graph Databases?
inferredcites →https://doi.org/10.1145/3104031openalex-snapshot
Foundations of Modern Query Languages for Graph Databases
inferredcites →https://doi.org/10.1145/3368756.3369047openalex-snapshot
A categorization of RDF triplestores
inferredcites →https://doi.org/10.1145/357980.358007openalex-snapshot
A relational model of data for large shared data banks
inferredcites →https://doi.org/10.1145/358024.358054openalex-snapshot
A simple guide to five normal forms in relational database theory
inferredcites →https://doi.org/10.1145/3604932openalex-snapshot
Demystifying Graph Databases: Analysis and Taxonomy of Data Organization, System Designs, and Graph Queries
inferredcites →https://doi.org/10.1145/362384.362685openalex-snapshot
A relational model of data for large shared data banks
inferredcites →https://doi.org/10.1186/1471-2105-10-s9-s14openalex-snapshot
Comparison of concept recognizers for building the Open Biomedical Annotator
inferredcites →https://doi.org/10.1186/gb-2007-8-3-r39openalex-snapshot
Reactome: a knowledge base of biologic pathways and processes
inferredcites →https://doi.org/10.1186/s12859-016-1394-xopenalex-snapshot
STON: exploring biological pathways using the SBGN standard and graph databases
inferredcites →https://doi.org/10.1186/s12859-017-1999-8openalex-snapshot
Inferring ontology graph structures using OWL reasoning
inferredcites →https://doi.org/10.1186/s12859-018-2298-8openalex-snapshot
Arena-Idb: a platform to build human non-coding RNA interaction networks
inferredcites →https://doi.org/10.1186/s12918-018-0616-4openalex-snapshot
BioGraph: a web application and a graph database for querying and analyzing bioinformatics resources
inferredcites →https://doi.org/10.1186/s12920-019-0627-zopenalex-snapshot
A network embedding model for pathogenic genes prediction by multi-path random walking on heterogeneous network
inferredcites →https://doi.org/10.1186/s13040-015-0079-8openalex-snapshot
A call for biological data mining approaches in epidemiology
inferredcites →https://doi.org/10.1186/s13040-016-0102-8openalex-snapshot
Representing and querying disease networks using graph databases
inferredcites →https://doi.org/10.1261/rna.2239606openalex-snapshot
TarBase: A comprehensive database of experimentally supported animal microRNA targets
inferredcites →https://doi.org/10.12688/wellcomeopenres.14073.2openalex-snapshot
ANIMA: Association network integration for multiscale analysis
inferredcites →https://doi.org/10.12688/wellcomeopenres.14073.3openalex-snapshot
ANIMA: Association network integration for multiscale analysis
inferredcites →https://doi.org/10.1371/journal.pcbi.1005457openalex-snapshot
Transcriptomics technologies
inferredcites →https://doi.org/10.1371/journal.pcbi.1005968openalex-snapshot
Reactome graph database: Efficient access to complex pathway data
inferredcites →https://doi.org/10.1371/journal.pone.0151771openalex-snapshot
miTALOS v2: Analyzing Tissue Specific microRNA Function
inferredcites →https://doi.org/10.1371/journal.pone.0179130openalex-snapshot
biochem4j: Integrated and extensible biochemical knowledge through graph databases
inferredcites →https://doi.org/10.1515/jib-2017-0082openalex-snapshot
SBML Level 3 Package: Flux Balance Constraints version 2
inferredcites →https://doi.org/10.1515/jib-2018-0023openalex-snapshot
Towards FAIRer Biological Knowledge Networks Using a Hybrid Linked Data and Graph Database Approach
inferredcites →https://doi.org/10.1515/jib-2018-0049openalex-snapshot
GenCoNet – A Graph Database for the Analysis of Comorbidities by Gene Networks
inferredcites →https://doi.org/10.24297/ijct.v3i1c.2775openalex-snapshot
Role of Adjacency Matrix & Adjacency List in Graph Theory
inferredcites →https://doi.org/10.4230/oasics.tannen.5openalex-snapshot
Chasing Parallelism in Aggregating Graph Queries
inferredcites →https://doi.org/10.5220/0006356003510356openalex-snapshot
Graph Databases: Neo4j Analysis
inferredcites →https://doi.org/10.5808/gi.2017.15.1.19openalex-snapshot
Use of Graph Database for the Integration of Heterogeneous Biological Data
inferredcites →https://doi.org/10.7717/peerj.3509openalex-snapshot
GeNNet: an integrated platform for unifying scientific workflows and graph databases for transcriptome data analysis
inferredcites →https://doi.org/10.9790/3021-03822527openalex-snapshot
Comparative analysis of Relational and Graph databases
What points at this work
Incoming claims: where this work appears in other papers’ reference lists and arguments.
inferred← citeshttps://doi.org/10.1007/978-3-031-18497-0_6openalex-snapshot
Terror Attack Classification with the Application of Orange Data Mining Tool and Neo4j Sandbox
inferred← citeshttps://doi.org/10.1007/978-3-031-20322-0_13openalex-snapshot
A Review of Graph Databases
inferred← citeshttps://doi.org/10.1007/978-3-031-54012-7_14openalex-snapshot
Support for the Development of Educational Programs with Graph Database Technology
inferred← citeshttps://doi.org/10.1007/978-3-031-81728-1_48openalex-snapshot
Molecular Representations for Drug Discovery
inferred← citeshttps://doi.org/10.1007/978-3-031-97799-2_5openalex-snapshot
Towards Low and No Code Programming in Graph Databases with Forms, Natural Language Querying, and Visualization
inferred← citeshttps://doi.org/10.1007/978-3-032-05607-8_27openalex-snapshot
Schema-Based Inference for Query Expansion and Completion over Knowledge Graphs
inferred← citeshttps://doi.org/10.1007/978-981-99-6544-1_6openalex-snapshot
Alzheimer’s Disease Knowledge Graph Based on Ontology and Neo4j Graph Database
inferred← citeshttps://doi.org/10.1007/s10238-025-01987-3openalex-snapshot
Multi-omics profiling and AI-driven clinically deployable risk models in MGUS and smoldering myeloma
inferred← citeshttps://doi.org/10.1016/j.acags.2023.100151openalex-snapshot
Knowledge graphs for seismic data and metadata
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Knowledge Graphs in Pharmacovigilance: A Step-By-Step Guide
inferred← citeshttps://doi.org/10.1016/j.comtox.2024.100308openalex-snapshot
AOPWIKI-EXPLORER: An interactive graph-based query engine leveraging large language models
inferred← citeshttps://doi.org/10.1016/j.cosrev.2026.100981openalex-snapshot
Data analytics algorithms in property graph databases: A survey
inferred← citeshttps://doi.org/10.1016/j.heliyon.2023.e22766openalex-snapshot
Quantitative patient graph analysis for transient ischemic attack risk factor distribution based on electronic medical records
inferred← citeshttps://doi.org/10.1016/j.jbi.2023.104382openalex-snapshot
Lessons learned to enable question answering on knowledge graphs extracted from scientific publications: A case study on the coronavirus literature
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GraSTI-ACL: Graph spatial–temporal infomax with adversarial contrastive learning for brain disorders diagnosis based on resting-state fMRI
inferred← citeshttps://doi.org/10.1016/j.websem.2024.100845openalex-snapshot
Enhancing foundation models for scientific discovery via multimodal knowledge graph representations
inferred← citeshttps://doi.org/10.1038/s41531-025-00914-3openalex-snapshot
Deciphering shared molecular dysregulation across Parkinson’s disease variants using a multi-modal network-based data integration and analysis
inferred← citeshttps://doi.org/10.1039/d4dd00120fopenalex-snapshot
Chemistry in a graph: modern insights into commercial organic synthesis planning
inferred← citeshttps://doi.org/10.1061/jaeied.aeeng-1483openalex-snapshot
Data Reliability in BIM and Performance Analytics: A Survey of Contemporary AECO Practice
inferred← citeshttps://doi.org/10.1093/bib/bbae561openalex-snapshot
Graph databases in systems biology: a systematic review
inferred← citeshttps://doi.org/10.1093/database/baac044openalex-snapshot
FGDB: a comprehensive graph database of ligand fragments from the Protein Data Bank
inferred← citeshttps://doi.org/10.1093/database/baad069openalex-snapshot
InCliniGene enables high-throughput and comprehensive in vivo clonal tracking toward clinical genomics data integration
inferred← citeshttps://doi.org/10.1093/database/baae121openalex-snapshot
The TOXIN knowledge graph: supporting animal-free risk assessment of cosmetics
inferred← citeshttps://doi.org/10.1109/access.2022.3171256openalex-snapshot
Performance of NoSQL Graph Implementations of Star vs. Snowflake Schemas
inferred← citeshttps://doi.org/10.1109/access.2023.3288813openalex-snapshot
Building a Digital Twin Network of SDN Using Knowledge Graphs
inferred← citeshttps://doi.org/10.1109/access.2024.3371976openalex-snapshot
Path Querying in Graph Databases: A Systematic Mapping Study
inferred← citeshttps://doi.org/10.1109/aeect69724.2026.11657875openalex-snapshot
Graph Database Systems & Graph-Native Processing for Biological Network Analysis
inferred← citeshttps://doi.org/10.1109/icdew61823.2024.00052openalex-snapshot
Integrating Complex Pangenome Graphs
inferred← citeshttps://doi.org/10.1109/icetems64039.2024.10964962openalex-snapshot
An Approach for Integrating Neo4j in a Dual-Model Database System
inferred← citeshttps://doi.org/10.1109/icoct64433.2025.11118902openalex-snapshot
Graph Databases in Web Applications for Analyzing the Network
inferred← citeshttps://doi.org/10.1109/ispa-bdcloud-socialcom-sustaincom59178.2023.00107openalex-snapshot
A NUMA-aware Graph Database for Hybrid Memory System
inferred← citeshttps://doi.org/10.1109/ispa63168.2024.00162openalex-snapshot
A Sorted and Dynamic Graph Storage System of the Hybrid Memory Architecture
inferred← citeshttps://doi.org/10.1109/iv68685.2025.00074openalex-snapshot
Mapping Drug Interactions and Therapeutic Clusters through Knowledge Graph Visualization
inferred← citeshttps://doi.org/10.1109/smap66932.2025.00040openalex-snapshot
NoSQL Databases: Models, Architectures, and Trends for Scalable Data Management
inferred← citeshttps://doi.org/10.1109/smarttechcon57526.2023.10391694openalex-snapshot
Scalability and Performance Evaluation of Graph Database Systems: A Comparative Study of Neo4j, JanusGraph, Memgraph, NebulaGraph, and TigerGraph
inferred← citeshttps://doi.org/10.1109/ssi58917.2023.10387962openalex-snapshot
Knowledge Graph-Based Approach for Interactive Problem Solving with the 8D Method
inferred← citeshttps://doi.org/10.1134/s0006350925700198openalex-snapshot
BearBase: Database of the Museum Collection of Polar Bear Specimens
inferred← citeshttps://doi.org/10.1145/3728361openalex-snapshot
MultiGraphMatch: A Subgraph Matching Algorithm for Multigraphs
inferred← citeshttps://doi.org/10.1145/3765611.3815512openalex-snapshot
Semantic Interoperability Enhancement Framework for Energy Data Management
inferred← citeshttps://doi.org/10.1186/s13104-022-05912-9openalex-snapshot
A cancer graph: a lung cancer property graph database in Neo4j
inferred← citeshttps://doi.org/10.14445/23488379/ijeee-v11i11p111openalex-snapshot
CNI-VIF: Enhanced Feature Selection for Graph Databases by Integrating Composite Node Information in VIF
inferred← citeshttps://doi.org/10.20944/preprints202403.1289.v1openalex-snapshot
The Use of Graph Databases in Systems Biology: A Systematic Review
inferred← citeshttps://doi.org/10.2196/86812openalex-snapshot
Enhanced Health Study Discoverability: Graph-Based Analysis Approach
inferred← citeshttps://doi.org/10.2196/preprints.86812openalex-snapshot
BRAinS: a graph-based analysis and recommendation approach for enhanced health study discoverability (Preprint)
inferred← citeshttps://doi.org/10.23919/fruct65909.2025.11008145openalex-snapshot
Object Type-based Data Description by Aggregation for Graph Databases
inferred← citeshttps://doi.org/10.2478/jamsi-2025-0005openalex-snapshot
Distance-based correlation analysis for graph databases
inferred← citeshttps://doi.org/10.25080/gerudo-f2bc6f59-00fopenalex-snapshot
aPhyloGeo-Covid: A Web Interface for Reproducible Phylogeographic Analysis of SARS-CoV-2 Variation using Neo4j and Snakemake
inferred← citeshttps://doi.org/10.25080/gerudo-f2bc6f59-039openalex-snapshot
Proceedings of the 22nd Python in Science Conference
inferred← citeshttps://doi.org/10.3233/shti220696openalex-snapshot
Analyzing SARS-CoV-2 Sequence Patterns by Semantic Trajectories
inferred← citeshttps://doi.org/10.3389/fmolb.2022.962799openalex-snapshot
Overview of methods for characterization and visualization of a protein–protein interaction network in a multi-omics integration context
inferred← citeshttps://doi.org/10.3390/app13095770openalex-snapshot
Experimental Evaluation of Graph Databases: JanusGraph, Nebula Graph, Neo4j, and TigerGraph
inferred← citeshttps://doi.org/10.3390/app131810497openalex-snapshot
A Knowledge Graph Framework for Dementia Research Data
inferred← citeshttps://doi.org/10.3390/app15158206openalex-snapshot
Refining Text2Cypher on Small Language Model with Reinforcement Learning Leveraging Semantic Information
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The Application of Graph in BIM/GIS Integration
inferred← citeshttps://doi.org/10.3390/plants10122707openalex-snapshot
Bluster or Lustre: Can AI Improve Crops and Plant Health?
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Extending Graph Databases With Relational Concepts
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Machine Learning in Drug Repurposing
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Compendium of neotropical termite genera: morphology and ecology database, ontology and applicability
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The Chatbot Systems for Mathematics Education using Knowledge Graphs and Named Entity Recognition
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PheBee: A Graph-Aware System for Scalable, Traceable, and Semantic Phenotyping
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Application of translational research to the study of biological functions associated with stress resistance and adaptation to agroecological cropping systems in pulses
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