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Curation of a reference database of COI sequences for insect identification through DNA metabarcoding: COins
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What this work says
Outgoing claims: the papers this work cites, builds on, or argues with.
inferredcites →https://doi.org/10.1007/s00216-016-9595-8openalex-snapshot
Advances in DNA metabarcoding for food and wildlife forensic species identification
inferredcites →https://doi.org/10.1016/s0022-2836(05)80360-2openalex-snapshot
Basic Local Alignment Search Tool
inferredcites →https://doi.org/10.1016/s0168-9525(00)02024-2openalex-snapshot
EMBOSS: The European Molecular Biology Open Software Suite
inferredcites →https://doi.org/10.1017/s0007485315000681openalex-snapshot
DNA metabarcoding of insects and allies: an evaluation of primers and pipelines
inferredcites →https://doi.org/10.1038/nmeth.3869openalex-snapshot
DADA2: High-resolution sample inference from Illumina amplicon data
inferredcites →https://doi.org/10.1038/s41467-020-14961-2openalex-snapshot
DNA metabarcoding and spatial modelling link diet diversification with distribution homogeneity in European bats
inferredcites →https://doi.org/10.1038/s41587-019-0209-9openalex-snapshot
Reproducible, interactive, scalable and extensible microbiome data science using QIIME 2
inferredcites →https://doi.org/10.1038/s41598-021-85855-6openalex-snapshot
Developing a non-destructive metabarcoding protocol for detection of pest insects in bulk trap catches
inferredcites →https://doi.org/10.1038/s41598-021-89950-6openalex-snapshot
Metabarcoding Malaise traps and soil eDNA reveals seasonal and local arthropod diversity shifts
inferredcites →https://doi.org/10.1038/sdata.2017.27openalex-snapshot
Metazoan mitochondrial gene sequence reference datasets for taxonomic assignment of environmental samples
inferredcites →https://doi.org/10.1073/pnas.0803076105openalex-snapshot
Many species in one: DNA barcoding overestimates the number of species when nuclear mitochondrial pseudogenes are coamplified
inferredcites →https://doi.org/10.1093/molbev/mst010openalex-snapshot
MAFFT Multiple Sequence Alignment Software Version 7: Improvements in Performance and Usability
inferredcites →https://doi.org/10.1093/nar/25.17.3389openalex-snapshot
Gapped BLAST and PSI-BLAST: a new generation of protein database search programs
inferredcites →https://doi.org/10.1111/1462-2920.15847openalex-snapshot
Does diet breadth affect the complexity of the phytophagous insect microbiota? The case study of Chrysomelidae
inferredcites →https://doi.org/10.1111/1755-0998.12942openalex-snapshot
New mitochondrial primers for metabarcoding of insects, designed and evaluated using in silico methods
inferredcites →https://doi.org/10.1111/1755-0998.13212openalex-snapshot
DNA metabarcoding for biodiversity monitoring in a national park: Screening for invasive and pest species
inferredcites →https://doi.org/10.1111/1755-0998.13352openalex-snapshot
Factors affecting the efficiency of molecular species delimitation in a species‐rich insect family
inferredcites →https://doi.org/10.1111/ddi.13504openalex-snapshot
DNA barcoding of Chironomidae from the Lake Skadar region: Reference library and a comparative analysis of the European fauna
inferredcites →https://doi.org/10.1111/j.1365-294x.2012.05470.xopenalex-snapshot
Towards next‐generation biodiversity assessment using DNA metabarcoding
inferredcites →https://doi.org/10.1111/j.1471-8286.2007.01678.xopenalex-snapshot
bold : The Barcode of Life Data System (http://www.barcodinglife.org)
inferredcites →https://doi.org/10.1111/j.1755-0998.2011.03108.xopenalex-snapshot
S pider : An R package for the analysis of species identity and evolution, with particular reference to DNA barcoding
inferredcites →https://doi.org/10.1111/mec.14350openalex-snapshot
Environmental DNA metabarcoding: Transforming how we survey animal and plant communities
inferredcites →https://doi.org/10.1111/mec.14817openalex-snapshot
Differential biodiversity responses between kingdoms (plants, fungi, bacteria and metazoa) along an Alpine succession gradient
inferredcites →https://doi.org/10.1111/mec.15632openalex-snapshot
Comparison of markers for the monitoring of freshwater benthic biodiversity through DNA metabarcoding
inferredcites →https://doi.org/10.1128/aem.00062-07openalex-snapshot
Naive Bayesian Classifier for Rapid Assignment of rRNA Sequences into the New Bacterial Taxonomy
inferredcites →https://doi.org/10.11646/megataxa.1.1.5openalex-snapshot
Challenges for the future of taxonomy: talents, databases and knowledge growth
inferredcites →https://doi.org/10.1186/1471-2105-10-421openalex-snapshot
BLAST+: architecture and applications
inferredcites →https://doi.org/10.1186/s40168-018-0470-zopenalex-snapshot
Optimizing taxonomic classification of marker-gene amplicon sequences with QIIME 2’s q2-feature-classifier plugin
inferredcites →https://doi.org/10.1371/journal.pcbi.1009581openalex-snapshot
RESCRIPt: Reproducible sequence taxonomy reference database management
inferredcites →https://doi.org/10.1371/journal.pone.0014280openalex-snapshot
Towards a Global Barcode Library for Lymantria (Lepidoptera: Lymantriinae) Tussock Moths of Biosecurity Concern
inferredcites →https://doi.org/10.1371/journal.pone.0017497openalex-snapshot
Environmental Barcoding: A Next-Generation Sequencing Approach for Biomonitoring Applications Using River Benthos
inferredcites →https://doi.org/10.1371/journal.pone.0036514openalex-snapshot
Wolbachia and DNA Barcoding Insects: Patterns, Potential, and Problems
inferredcites →https://doi.org/10.1371/journal.pone.0226527openalex-snapshot
Increased performance of DNA metabarcoding of macroinvertebrates by taxonomic sorting
inferredcites →https://doi.org/10.3389/fphar.2020.00336openalex-snapshot
Tracing the Edible and Medicinal Plant Pueraria montana and Its Products in the Marketplace Yields Subspecies Level Distinction Using DNA Barcoding and DNA Metabarcoding
inferredcites →https://doi.org/10.3390/insects11080489openalex-snapshot
DNA Barcoding: A Reliable Method for the Identification of Thrips Species (Thysanoptera, Thripidae) Collected on Sticky Traps in Onion Fields
inferredcites →https://doi.org/10.3897/biss.3.37986openalex-snapshot
mBRAVE: The Multiplex Barcode Research And Visualization Environment
inferredcites →https://doi.org/10.3897/mbmg.4.53535openalex-snapshot
BOLDigger – a Python package to identify and organise sequences with the Barcode of Life Data systems
inferredcites →https://doi.org/10.3897/zookeys.931.51583openalex-snapshot
Proposed Amendments to the Constitution of the International Commission on Zoological Nomenclature
inferredcites →https://doi.org/10.48550/arxiv.1201.0490openalex-snapshot
Scikit-learn: Machine Learning in Python
inferredcites →https://doi.org/10.5281/zenodo.15145663openalex-snapshot
Table 1 in A new Gammarus species from Xinjiang Uygur Autonomous Region (China) with a key to Xinjiang freshwater gammarids (Crustacea, Amphipoda, Gammaridae)
inferredcites →https://doi.org/10.5962/bhl.title.50608openalex-snapshot
International code of zoological nomenclature = Code international de nomenclature zoologique
inferredcites →https://doi.org/10.7717/peerj.7745openalex-snapshot
Validation of COI metabarcoding primers for terrestrial arthropods
What points at this work
Incoming claims: where this work appears in other papers’ reference lists and arguments.
inferred← citeshttps://doi.org/10.3897/zookeys.1285.189385zenodo-depositor-declared
Contributions to the knowledge of Albanian Chrysomelidae (Coleoptera), with the redescription of Luperus flaviceps Apfelbeck, 1912
inferred← citeshttps://doi.org/10.59893/abud.25(2).007zenodo-depositor-declared
TESTING METABARCODING WITH MORPHOLOGICALLY IDENTIFIED SAMPLES RAISES QUESTIONS ABOUT RELIABILITY
inferred← citeshttps://doi.org/10.1002/aps3.11633openalex-snapshot
Looking to the past to inform the future: What eDNA from herbarium specimens can tell us about plant–animal interactions
inferred← citeshttps://doi.org/10.1002/ece3.11457openalex-snapshot
WiPFIM: A digital platform for interlinking biocollections of wild plants, fruits, associated insects, and their molecular barcodes
inferred← citeshttps://doi.org/10.1002/ece3.71333openalex-snapshot
Evaluation of Oxford Nanopore Technologies MinION Sequencer as a Novel Short Amplicon Metabarcoding Tool Using Arthropod Mock Sample and Irish Bat Diet Characterisation
inferred← citeshttps://doi.org/10.1002/ece3.73150openalex-snapshot
A Regional DNA Barcode Library for Northern Rocky Mountain Arthropods to Support Biodiversity and Molecular Ecological Research
inferred← citeshttps://doi.org/10.1002/edn3.540openalex-snapshot
Illuminating arthropod diversity in a tropical forest: Assessing biodiversity by automatic light trapping and DNA metabarcoding
inferred← citeshttps://doi.org/10.1007/978-1-0716-3581-0_29openalex-snapshot
Principles for Constructing DNA Barcode Reference Libraries
inferred← citeshttps://doi.org/10.1007/978-981-97-1223-6_16openalex-snapshot
Barcoding of Life for Detection and Diagnosis of Diseases and Pests in Potato
inferred← citeshttps://doi.org/10.1007/978-981-97-4363-6_15openalex-snapshot
Genetic Engineering and Genome Editing Approaches for Identification and Sustainable Management of Insect Pests Under Forest Dynamics
inferred← citeshttps://doi.org/10.1007/s00040-024-01013-xopenalex-snapshot
The terrestrial isopod Porcellionides pruinosus as a facultative ant guest along foraging trails and inside Messor ebeninus nests in the Negev Desert
inferred← citeshttps://doi.org/10.1007/s00040-025-01070-wopenalex-snapshot
First record of Stylotermitidae (Insecta: Blattodea) from Pakistan: distribution, habitat preference, and molecular characterization
inferred← citeshttps://doi.org/10.1007/s10841-024-00584-1openalex-snapshot
Metabarcoding: opportunities for accelerating monitoring and understanding insect tropical biodiversity
inferred← citeshttps://doi.org/10.1016/j.ade.2026.100009openalex-snapshot
YZFishDB: A curated DNA reference database for the fishes of the Yangtze River Basin
inferred← citeshttps://doi.org/10.1016/j.cois.2025.101367openalex-snapshot
Emerging technologies for pollinator monitoring
inferred← citeshttps://doi.org/10.1016/j.gecco.2026.e04083openalex-snapshot
Livin’ on the edge. A case study on gene flow restoration for the endemic species Primula palinuri Petagna with a fragmented habitat
inferred← citeshttps://doi.org/10.1016/j.watbs.2026.100635openalex-snapshot
Tracking marine invaders in Portuguese marinas by DNA metabarcoding from coast to archipelagos
inferred← citeshttps://doi.org/10.1080/24750263.2023.2298977openalex-snapshot
DNA barcoding reference libraries of Italian Plecoptera: a gap analysis
inferred← citeshttps://doi.org/10.1093/aesa/saae018openalex-snapshot
Curating BOLD records via Bayesian phylogenetic assignments enables harmonization of regional subgeneric classifications and cryptic species detection within the genus Tachina (Diptera: Tachinidae)
inferred← citeshttps://doi.org/10.1093/database/baae002openalex-snapshot
Filling knowledge gaps in insect conservation by leveraging genetic data from public archives
inferred← citeshttps://doi.org/10.1093/database/baaf057openalex-snapshot
A novel taxonomic database for eukaryotic mitochondrial cytochrome oxidase subunit I gene (eKOI), with a focus on protists diversity
inferred← citeshttps://doi.org/10.1093/ismeco/ycaf213openalex-snapshot
In-situ diet–microbiota associations across taxonomic scales in desert-dwelling amphibians and reptiles
inferred← citeshttps://doi.org/10.1099/jgv.0.002271openalex-snapshot
Vector-enabled metagenomics reveals the first detection of the geminivirus beet curly top Iran virus in Europe
inferred← citeshttps://doi.org/10.1101/2024.12.05.626972openalex-snapshot
A Novel Taxonomic Database for eukaryotic Mitochondrial Cytochrome Oxidase subunit I Gene (eKOI): Enhancing taxonomic resolution at community-level in metabarcoding analyses
inferred← citeshttps://doi.org/10.1101/2025.06.23.660658openalex-snapshot
Ports of Entry: Tracking Marine Invaders in Portuguese Marinas with DNA Metabarcoding from Coast to Archipelagos
inferred← citeshttps://doi.org/10.1111/1749-4877.12972openalex-snapshot
COI Metabarcoding with a Curated Reference Database and Optimized Protocol Provides a Reliable Species‐Level Diversity Assessment of Tardigrades
inferred← citeshttps://doi.org/10.1111/1755-0998.13756openalex-snapshot
COInr and mkCOInr : Building and customizing a nonredundant barcoding reference database from BOLD and NCBI using a semi‐automated pipeline
inferred← citeshttps://doi.org/10.1111/1755-0998.13814openalex-snapshot
eDNA metabarcoding of avocado flowers: ‘Hass’ it got potential to survey arthropods in food production systems?
inferred← citeshttps://doi.org/10.1111/1755-0998.13997openalex-snapshot
Enhancing metabarcoding efficiency and ecological insights through integrated taxonomy and DNA reference barcoding: A case study on beach meiofauna
inferred← citeshttps://doi.org/10.1111/icad.12726openalex-snapshot
eDNA for monitoring and conserving terrestrial arthropods: Insights from a systematic map and barcode repositories assessments
inferred← citeshttps://doi.org/10.1111/icad.12843openalex-snapshot
Towards DNA metabarcoding‐based haplotype for monitoring terrestrial arthropod communities
inferred← citeshttps://doi.org/10.1111/mec.70003openalex-snapshot
Metabarcoding Analysis of Arthropod Pollinator Diversity: A Methodological Comparison of eDNA Derived From Flowers and DNA Derived From Bulk Samples of Insects
inferred← citeshttps://doi.org/10.1371/journal.pone.0277379openalex-snapshot
Taxonomic identification accuracy from BOLD and GenBank databases using over a thousand insect DNA barcodes from Colombia
inferred← citeshttps://doi.org/10.1371/journal.pone.0286620openalex-snapshot
Interrogating 1000 insect genomes for NUMTs: A risk assessment for estimates of species richness
inferred← citeshttps://doi.org/10.21203/rs.3.rs-7367951/v1openalex-snapshot
Assessment of Insect Communities with Metabarcoding
inferred← citeshttps://doi.org/10.3390/insects17010060openalex-snapshot
Decoding Biodiversity in Baiyangdian Lake: A DNA Barcode Reference Library for Aquatic Insects
inferred← citeshttps://doi.org/10.4081/aiol.2022.11051openalex-snapshot
Building a local reference library for metabarcoding survey of lake macrobenthos: oligochaetes and chironomids from Lake Maggiore
inferred← citeshttps://doi.org/10.48130/jzser-0026-0016openalex-snapshot
Integrating evidence to disentangle multiple cryptic speciation events in a cuckoo bumblebee species group
inferred← citeshttps://doi.org/10.5141/jee.23.049openalex-snapshot
Dietary composition of two coexisting bat species, Myotis ikonnikovi and Plecotus ognevi, in the Mt. Jumbong forests, South Korea
inferred← citeshttps://doi.org/10.7287/peerj.14616v0.1/reviews/1openalex-snapshot
Peer Review #1 of "Be positive: customized reference databases and new, local barcodes balance false taxonomic assignments in metabarcoding studies (v0.1)"
inferred← citeshttps://doi.org/10.7287/peerj.14616v0.1/reviews/2openalex-snapshot
Peer Review #2 of "Be positive: customized reference databases and new, local barcodes balance false taxonomic assignments in metabarcoding studies (v0.1)"
inferred← citeshttps://doi.org/10.7287/peerj.14616v0.2/reviews/2openalex-snapshot
Peer Review #2 of "Be positive: customized reference databases and new, local barcodes balance false taxonomic assignments in metabarcoding studies (v0.2)"
inferred← citeshttps://doi.org/10.7717/peerj.14616openalex-snapshot
Be positive: customized reference databases and new, local barcodes balance false taxonomic assignments in metabarcoding studies
inferred← citeshttps://doi.org/10.7717/peerj.16253openalex-snapshot
taxalogue: a toolkit to create comprehensive CO1 reference databases
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