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MiDAS: the field guide to the microbes of activated sludge

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What this work says

Outgoing claims: the papers this work cites, builds on, or argues with.

inferredcites →https://doi.org/10.1002/9781118010518.ch46openalex-snapshot
ARB: A Software Environment for Sequence Data
inferredcites →https://doi.org/10.1016/0043-1354(75)90182-7openalex-snapshot
Filamentous organisms observed in activated sludge
inferredcites →https://doi.org/10.1016/j.copbio.2011.11.027openalex-snapshot
Microbial communities involved in enhanced biological phosphorus removal from wastewater — a model system in environmental biotechnology
inferredcites →https://doi.org/10.1016/j.watres.2007.02.030openalex-snapshot
Advances in enhanced biological phosphorus removal: From micro to macro scale
inferredcites →https://doi.org/10.1016/j.watres.2008.02.015openalex-snapshot
Adhesion characteristics of nitrifying bacteria in activated sludge
inferredcites →https://doi.org/10.1016/j.watres.2010.07.036openalex-snapshot
A conceptual ecosystem model of microbial communities in enhanced biological phosphorus removal plants
inferredcites →https://doi.org/10.1016/j.watres.2012.04.009openalex-snapshot
Population dynamics of filamentous bacteria in Danish wastewater treatment plants with nutrient removal
inferredcites →https://doi.org/10.1016/s0378-1097(01)00561-4openalex-snapshot
Phylogeny of the filamentous bacterium Eikelboom Type 1851, and design and application of a 16S rRNA targeted oligonucleotide probe for its fluorescence in situ identification in activated sludge
inferredcites →https://doi.org/10.1021/es062631kopenalex-snapshot
A Vista for Microbial Ecology and Environmental Biotechnology
inferredcites →https://doi.org/10.1021/es2014264openalex-snapshot
Domestic Wastewater Treatment as a Net Energy Producer–Can This be Achieved?
inferredcites →https://doi.org/10.1038/22749openalex-snapshot
Missing lithotroph identified as new planctomycete
inferredcites →https://doi.org/10.1038/ismej.2011.139openalex-snapshot
An improved Greengenes taxonomy with explicit ranks for ecological and evolutionary analyses of bacteria and archaea
inferredcites →https://doi.org/10.1038/ismej.2011.176openalex-snapshot
A metagenome of a full-scale microbial community carrying out enhanced biological phosphorus removal
inferredcites →https://doi.org/10.1038/ismej.2011.188openalex-snapshot
454 Pyrosequencing reveals bacterial diversity of activated sludge from 14 sewage treatment plants
inferredcites →https://doi.org/10.1038/ismej.2012.160openalex-snapshot
Phylogenetic conservatism of functional traits in microorganisms
inferredcites →https://doi.org/10.1038/ismej.2012.70openalex-snapshot
Nitrification expanded: discovery, physiology and genomics of a nitrite-oxidizing bacterium from the phylum Chloroflexi
inferredcites →https://doi.org/10.1038/ismej.2012.8openalex-snapshot
Ultra-high-throughput microbial community analysis on the Illumina HiSeq and MiSeq platforms
inferredcites →https://doi.org/10.1038/nbt.2579openalex-snapshot
Genome sequences of rare, uncultured bacteria obtained by differential coverage binning of multiple metagenomes
inferredcites →https://doi.org/10.1038/nmeth.f.303openalex-snapshot
QIIME allows analysis of high-throughput community sequencing data
inferredcites →https://doi.org/10.1038/nrmicro3330openalex-snapshot
Uniting the classification of cultured and uncultured bacteria and archaea using 16S rRNA gene sequences
inferredcites →https://doi.org/10.1093/database/baq013openalex-snapshot
The Human Oral Microbiome Database: a web accessible resource for investigating oral microbe taxonomic and genomic information
inferredcites →https://doi.org/10.1093/nar/gkh293openalex-snapshot
ARB: a software environment for sequence data
inferredcites →https://doi.org/10.1093/nar/gks1219openalex-snapshot
The SILVA ribosomal RNA gene database project: improved data processing and web-based tools
inferredcites →https://doi.org/10.1093/nar/gkt1111openalex-snapshot
LPSN—list of prokaryotic names with standing in nomenclature
inferredcites →https://doi.org/10.1093/nar/gkt1244openalex-snapshot
Ribosomal Database Project: data and tools for high throughput rRNA analysis
inferredcites →https://doi.org/10.1093/nar/gku1201openalex-snapshot
rrnDB: improved tools for interpreting rRNA gene abundance in bacteria and archaea and a new foundation for future development
inferredcites →https://doi.org/10.1099/00207713-16-4-459openalex-snapshot
International Code of Nomenclature of Bacteria 1
inferredcites →https://doi.org/10.1099/00207713-45-1-186openalex-snapshot
Taxonomic Note: Implementation of the Provisional Status Candidatus for Incompletely Described Procaryotes
inferredcites →https://doi.org/10.1111/1462-2920.12074openalex-snapshot
High and stable substrate specificities of microorganisms in enhanced biological phosphorus removal plants
inferredcites →https://doi.org/10.1111/j.1462-2920.2006.01033.xopenalex-snapshot
Nitrite concentration influences the population structure of Nitrospira ‐like bacteria
inferredcites →https://doi.org/10.1111/j.1462-2920.2006.01107.xopenalex-snapshot
The in situ physiology of Skermania piniformis in foams in Australian activated sludge plants
inferredcites →https://doi.org/10.1111/j.1462-2920.2012.02826.xopenalex-snapshot
‘ Candidatus Halomonas phosphatis’, a novel polyphosphate‐accumulating organism in full‐scale enhanced biological phosphorus removal plants
inferredcites →https://doi.org/10.1111/j.1574-6941.2006.00251.xopenalex-snapshot
Identity, abundance and ecophysiology of filamentous Chloroflexi species present in activated sludge treatment plants
inferredcites →https://doi.org/10.1111/j.1574-6941.2011.01065.xopenalex-snapshot
Eikelboom's morphotype 0803 in activated sludge belongs to the genus Caldilinea in the phylum Chloroflexi
inferredcites →https://doi.org/10.1111/j.1574-6976.2009.00186.xopenalex-snapshot
Identity and ecophysiology of filamentous bacteria in activated sludge
inferredcites →https://doi.org/10.1111/j.1758-2229.2010.00201.xopenalex-snapshot
The activated sludge bulking filament Eikelboom morphotype 0914 is a member of the Chloroflexi
inferredcites →https://doi.org/10.1128/aem.02310-08openalex-snapshot
Filamentous Bacterium Eikelboom Type 0092 in Activated Sludge Plants in Australia Is a Member of the Phylum Chloroflexi
inferredcites →https://doi.org/10.1186/s40793-015-0013-1openalex-snapshot
High quality draft genome sequence of Meganema perideroedes str. Gr1T and a proposal for its reclassification to the family Meganemaceae fam. nov.
inferredcites →https://doi.org/10.1201/9780203503157openalex-snapshot
Manual on the Causes and Control of Activated Sludge Bulking, Foaming, and Other Solids Separation Problems
inferredcites →https://doi.org/10.1371/journal.pone.0132783openalex-snapshot
Back to Basics – The Influence of DNA Extraction and Primer Choice on Phylogenetic Analysis of Activated Sludge Communities
inferredcites →https://doi.org/10.2166/9781780401645openalex-snapshot
Microbial Ecology of Activated Sludge
inferredcites →https://doi.org/10.2166/wst.2002.0464openalex-snapshot
Characterization of type 1851 organism isolated from activated sludge samples
inferredcites →https://doi.org/10.2166/wst.2013.151openalex-snapshot
The Microbial Database for Danish wastewater treatment plants with nutrient removal (MiDas-DK) – a tool for understanding activated sludge population dynamics and community stability

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Incoming claims: where this work appears in other papers’ reference lists and arguments.

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High-rate activated sludge communities have a distinctly different structure compared to low-rate sludge communities, and are less sensitive towards environmental and operational variables
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inferred← citeshttps://doi.org/10.1016/j.watres.2016.10.046openalex-snapshot
Evaluation of a membrane bioreactor system as post-treatment in waste water treatment for better removal of micropollutants
inferred← citeshttps://doi.org/10.1016/j.watres.2017.01.006openalex-snapshot
Non-denitrifying polyphosphate accumulating organisms obviate requirement for anaerobic condition
inferred← citeshttps://doi.org/10.1016/j.watres.2017.01.064openalex-snapshot
The link of feast-phase dissolved oxygen (DO) with substrate competition and microbial selection in PHA production
inferred← citeshttps://doi.org/10.1016/j.watres.2017.03.017openalex-snapshot
Long-term effects of sulphide on the enhanced biological removal of phosphorus: The symbiotic role of Thiothrix caldifontis
inferred← citeshttps://doi.org/10.1016/j.watres.2017.04.056openalex-snapshot
Unified understanding of physico-chemical properties of activated sludge and fouling propensity
inferred← citeshttps://doi.org/10.1016/j.watres.2017.05.029openalex-snapshot
Pilot plant demonstration of stable and efficient high rate biological nutrient removal with low dissolved oxygen conditions
inferred← citeshttps://doi.org/10.1016/j.watres.2018.03.040openalex-snapshot
Transformation, CO2 formation and uptake of four organic micropollutants by carrier-attached microorganisms
inferred← citeshttps://doi.org/10.1016/j.watres.2018.07.051openalex-snapshot
Towards an eDNA metabarcode-based performance indicator for full-scale municipal wastewater treatment plants
inferred← citeshttps://doi.org/10.1016/j.watres.2018.10.086openalex-snapshot
Comparison between kinetics of autochthonous marine bacteria in activated sludge and granular sludge systems at different salinity and SRTs
inferred← citeshttps://doi.org/10.1016/j.watres.2018.11.011openalex-snapshot
Polyphosphate-accumulating organisms in full-scale tropical wastewater treatment plants use diverse carbon sources
inferred← citeshttps://doi.org/10.1016/j.watres.2019.03.053openalex-snapshot
“Candidatus Accumulibacter delftensis”: A clade IC novel polyphosphate-accumulating organism without denitrifying activity on nitrate
inferred← citeshttps://doi.org/10.1016/j.watres.2019.03.093openalex-snapshot
Bacterial assembly in the bio-cake of membrane bioreactors: Stochastic vs. deterministic processes
inferred← citeshttps://doi.org/10.1016/j.watres.2019.04.050openalex-snapshot
Size-dependent microbial diversity of sub-visible particles in a submerged anaerobic membrane bioreactor (SAnMBR): Implications for membrane fouling
inferred← citeshttps://doi.org/10.1016/j.watres.2019.115104openalex-snapshot
Community members in activated sludge as determined by molecular probe technology
inferred← citeshttps://doi.org/10.1016/j.watres.2019.115109openalex-snapshot
Side-stream enhanced biological phosphorus removal (S2EBPR) process improves system performance - A full-scale comparative study
inferred← citeshttps://doi.org/10.1016/j.watres.2019.115268openalex-snapshot
Long solids retention times and attached growth phase favor prevalence of comammox bacteria in nitrogen removal systems
inferred← citeshttps://doi.org/10.1016/j.watres.2019.115276openalex-snapshot
Biodegradability of wastewater determines microbial assembly mechanisms in full-scale wastewater treatment plants
inferred← citeshttps://doi.org/10.1016/j.watres.2020.115955openalex-snapshot
MiDAS 3: An ecosystem-specific reference database, taxonomy and knowledge platform for activated sludge and anaerobic digesters reveals species-level microbiome composition of activated sludge
inferred← citeshttps://doi.org/10.1016/j.watres.2020.116372openalex-snapshot
A refined set of rRNA-targeted oligonucleotide probes for in situ detection and quantification of ammonia-oxidizing bacteria
inferred← citeshttps://doi.org/10.1016/j.watres.2021.117608openalex-snapshot
Prospects for multi-omics in the microbial ecology of water engineering
inferred← citeshttps://doi.org/10.1016/j.watres.2021.117725openalex-snapshot
Oligotyping and metagenomics reveal distinct Candidatus Accumulibacter communities in side-stream versus conventional full-scale enhanced biological phosphorus removal (EBPR) systems
inferred← citeshttps://doi.org/10.1016/j.watres.2022.119074openalex-snapshot
Interrogating nitritation at a molecular level: Understanding the potential influence of Nitrobacter spp.
inferred← citeshttps://doi.org/10.1016/j.watres.2023.121050openalex-snapshot
Side-Stream Enhanced Biological Phosphorus Removal (S2EBPR) enables effective phosphorus removal in a pilot-scale A-B stage shortcut nitrogen removal system for mainstream municipal wastewater treatment
inferred← citeshttps://doi.org/10.1016/j.wroa.2019.100033openalex-snapshot
Organic substrate diffusibility governs microbial community composition, nutrient removal performance and kinetics of granulation of aerobic granular sludge
inferred← citeshttps://doi.org/10.1016/j.wroa.2022.100157openalex-snapshot
Ammonia oxidation by novel “Candidatus Nitrosacidococcus urinae” is sensitive to process disturbances at low pH and to iron limitation at neutral pH
inferred← citeshttps://doi.org/10.1021/acs.est.0c07891openalex-snapshot
Overlooked Ecological Roles of Influent Wastewater Microflora in Improving Biological Phosphorus Removal in an Anoxic/Aerobic MBR Process
inferred← citeshttps://doi.org/10.1021/acs.est.2c03043openalex-snapshot
Exploring the Limits of Polyhydroxyalkanoate Production by Municipal Activated Sludge
inferred← citeshttps://doi.org/10.1021/acs.est.2c06858openalex-snapshot
Multi-scale Investigation of Ammonia-Oxidizing Microorganisms in Biofilters Used for Drinking Water Treatment
inferred← citeshttps://doi.org/10.1021/acs.est.3c03917openalex-snapshot
Toward Integrating EBPR and the Short-Cut Nitrogen Removal Process in a One-Stage System for Treating High-Strength Wastewater
inferred← citeshttps://doi.org/10.1021/acs.est.5c05925openalex-snapshot
Building Predictive Understanding of the Activated Sludge Microbiome by Bridging Microbial Growth Kinetics and Microbial Population Dynamics
inferred← citeshttps://doi.org/10.1021/acs.est.6b04200openalex-snapshot
Influence of Different Sewer Biofilms on Transformation Rates of Drugs
inferred← citeshttps://doi.org/10.1021/acs.est.6c03437openalex-snapshot
Genome-Resolved Metagenomics Revealed the Functional Potential of Core Novel and Known Genera Key to Processes in Full-Scale Aerobic Granular Sludge Plants
inferred← citeshttps://doi.org/10.1021/acs.est.7b00392openalex-snapshot
Growth of Nitrosococcus -Related Ammonia Oxidizing Bacteria Coincides with Extremely Low pH Values in Wastewater with High Ammonia Content
inferred← citeshttps://doi.org/10.1021/acs.est.7b02567openalex-snapshot
An Osmotic Membrane Bioreactor–Membrane Distillation System for Simultaneous Wastewater Reuse and Seawater Desalination: Performance and Implications
inferred← citeshttps://doi.org/10.1021/acs.est.7b05619openalex-snapshot
Emerging Biodegradation of the Previously Persistent Artificial Sweetener Acesulfame in Biological Wastewater Treatment
inferred← citeshttps://doi.org/10.1021/acs.est.8b05874openalex-snapshot
Comparable Nutrient Uptake across Diel Cycles by Three Distinct Phototrophic Communities
inferred← citeshttps://doi.org/10.1021/acs.est.8b06669openalex-snapshot
Combined Deterministic and Stochastic Processes Control Microbial Succession in Replicate Granular Biofilm Reactors
inferred← citeshttps://doi.org/10.1021/acs.est.8b07303openalex-snapshot
Importance of Species Sorting and Immigration on the Bacterial Assembly of Different-Sized Aggregates in a Full-Scale Aerobic Granular Sludge Plant
inferred← citeshttps://doi.org/10.1021/acsestengg.3c00320openalex-snapshot
Influence of pH on Urine Nitrification: Community Shifts of Ammonia-Oxidizing Bacteria and Inhibition of Nitrite-Oxidizing Bacteria
inferred← citeshttps://doi.org/10.1021/acsestwater.3c00715openalex-snapshot
Exploring Community and Kinetic Shifts in Nitrifying Microbial Communities in Low Dissolved Oxygen Activated Sludge Facilities for Energy-Efficient Biological Nitrogen Removal
inferred← citeshttps://doi.org/10.1038/ismej.2015.117openalex-snapshot
The activated sludge ecosystem contains a core community of abundant organisms
inferred← citeshttps://doi.org/10.1038/ismej.2016.121openalex-snapshot
Regional synchrony in full-scale activated sludge bioreactors due to deterministic microbial community assembly
inferred← citeshttps://doi.org/10.1038/ismej.2016.14openalex-snapshot
Genomic and in situ investigations of the novel uncultured Chloroflexi associated with 0092 morphotype filamentous bulking in activated sludge
inferred← citeshttps://doi.org/10.1038/ismej.2016.43openalex-snapshot
Genomic insights into members of the candidate phylum Hyd24-12 common in mesophilic anaerobic digesters
inferred← citeshttps://doi.org/10.1038/nbt.4045openalex-snapshot
Retrieval of a million high-quality, full-length microbial 16S and 18S rRNA gene sequences without primer bias
inferred← citeshttps://doi.org/10.1038/s41396-021-00941-xopenalex-snapshot
Prokaryotic taxonomy and nomenclature in the age of big sequence data
inferred← citeshttps://doi.org/10.1038/s41467-020-19006-2openalex-snapshot
Integration of time-series meta-omics data reveals how microbial ecosystems respond to disturbance
inferred← citeshttps://doi.org/10.1038/s41467-022-29438-7openalex-snapshot
MiDAS 4: A global catalogue of full-length 16S rRNA gene sequences and taxonomy for studies of bacterial communities in wastewater treatment plants
inferred← citeshttps://doi.org/10.1038/s41467-024-49641-yopenalex-snapshot
MiDAS 5: Global diversity of bacteria and archaea in anaerobic digesters
inferred← citeshttps://doi.org/10.1038/s41467-025-64175-7openalex-snapshot
Predicting microbial community structure and temporal dynamics by using graph neural network models
inferred← citeshttps://doi.org/10.1038/s41522-022-00291-2openalex-snapshot
Niche differentiation drives microbial community assembly and succession in full-scale activated sludge bioreactors
inferred← citeshttps://doi.org/10.1038/s41522-024-00581-xopenalex-snapshot
Community successional patterns and inter-kingdom interactions during granular biofilm development
inferred← citeshttps://doi.org/10.1038/s41564-021-00892-1openalex-snapshot
Cocultivation of an ultrasmall environmental parasitic bacterium with lytic ability against bacteria associated with wastewater foams
inferred← citeshttps://doi.org/10.1038/s41579-019-0255-9openalex-snapshot
Common principles and best practices for engineering microbiomes
inferred← citeshttps://doi.org/10.1038/s41598-017-01481-1openalex-snapshot
Filamentous bulking caused by Thiothrix species is efficiently controlled in full-scale wastewater treatment plants by implementing a sludge densification strategy
inferred← citeshttps://doi.org/10.1038/s41598-017-09303-0openalex-snapshot
The impact of immigration on microbial community composition in full-scale anaerobic digesters
inferred← citeshttps://doi.org/10.1038/s41598-018-35843-0openalex-snapshot
Interpersonal Variations in Gut Microbiota Profiles Supersedes the Effects of Differing Fecal Storage Conditions
inferred← citeshttps://doi.org/10.1038/s41598-018-38006-3openalex-snapshot
A variety of hydrogenotrophic enrichment cultures catalyse cathodic reactions
inferred← citeshttps://doi.org/10.1038/s41598-020-62853-8openalex-snapshot
Network-based metabolic characterization of renal cell carcinoma
inferred← citeshttps://doi.org/10.1038/s41598-020-63534-2openalex-snapshot
Exploring the operating factors controlling Kouleothrix (type 1851), the dominant filamentous bacterial population, in a full-scale A2O plant
inferred← citeshttps://doi.org/10.1038/s41598-021-81790-8openalex-snapshot
Pre- and postmenopausal women have different core urinary microbiota
inferred← citeshttps://doi.org/10.1038/s41598-023-37744-3openalex-snapshot
Seasonal prevalence of bacteria in the outflow of two full-scale municipal wastewater treatment plants
inferred← citeshttps://doi.org/10.1038/srep25719openalex-snapshot
Integrative microbial community analysis reveals full-scale enhanced biological phosphorus removal under tropical conditions
inferred← citeshttps://doi.org/10.1038/srep30376openalex-snapshot
Summer holidays as break-point in shaping a tannery sludge microbial community around a stable core microbiota
inferred← citeshttps://doi.org/10.1039/c5cp04894jopenalex-snapshot
The role of N7 protonation of guanine in determining the structure, stability and function of RNA base pairs
inferred← citeshttps://doi.org/10.1039/c6ew00030dopenalex-snapshot
Emerging investigators series: microbial communities in full-scale drinking water distribution systems – a meta-analysis
inferred← citeshttps://doi.org/10.1039/c7ew00385dopenalex-snapshot
The mechanical scouring of bio-carriers improves phosphorus removal and mediates functional microbiomes in membrane bioreactors
inferred← citeshttps://doi.org/10.1039/d1ew00231gopenalex-snapshot
Plant-wide systems microbiology for the wastewater industry
inferred← citeshttps://doi.org/10.1039/d2ew00200kopenalex-snapshot
Effects of early biofilm formation on water quality during commissioning of new polyethylene pipes
inferred← citeshttps://doi.org/10.1039/d5ew00501aopenalex-snapshot
Assessing the impact of semiconductor wastewater on biological nutrient removal wastewater treatment
inferred← citeshttps://doi.org/10.1061/(asce)ee.1943-7870.0001905openalex-snapshot
Evaluating Different Quantitative PCR Assays to Enumerate Specific Microbial Populations in Anaerobic Digesters Treating Municipal Wastewater Solids
inferred← citeshttps://doi.org/10.1073/pnas.2021589118openalex-snapshot
Mass-immigration determines the assembly of activated sludge microbial communities
inferred← citeshttps://doi.org/10.1080/07391102.2021.2000499openalex-snapshot
Identification and functional annotation of hypothetical proteins of uropathogenic Escherichia coli strain CFT073 towards designing antimicrobial drug targets
inferred← citeshttps://doi.org/10.1080/08927014.2017.1367386openalex-snapshot
Unravelling the core microbiome of biofilms in cooling tower systems
inferred← citeshttps://doi.org/10.1080/08927014.2018.1541454openalex-snapshot
Biofilm diversity, structure and matrix seasonality in a full-scale cooling tower
inferred← citeshttps://doi.org/10.1080/08927014.2018.1556259openalex-snapshot
Subsea tunnel reinforced sprayed concrete subjected to deterioration harbours distinct microbial communities
inferred← citeshttps://doi.org/10.1080/08927014.2024.2343839openalex-snapshot
Characterizing the development of biofilm in polyethylene pipes in the non-chlorinated Danish drinking-water distribution system
inferred← citeshttps://doi.org/10.1080/09593330.2017.1393010openalex-snapshot
Effects of different wastewater characteristics and treatment techniques on the bacterial community structure in three pharmaceutical wastewater treatment systems
inferred← citeshttps://doi.org/10.1080/09593330.2018.1551938openalex-snapshot
Elucidating performance failures in use of granular sludge for nutrient removal from domestic wastewater in a warm coastal climate region
inferred← citeshttps://doi.org/10.1093/bioinformatics/btx791openalex-snapshot
FROGS: Find, Rapidly, OTUs with Galaxy Solution
inferred← citeshttps://doi.org/10.1093/database/baaa104openalex-snapshot
A hybrid approach toward biomedical relation extraction training corpora: combining distant supervision with crowdsourcing
inferred← citeshttps://doi.org/10.1093/database/bax016openalex-snapshot
MiDAS 2.0: an ecosystem-specific taxonomy and online database for the organisms of wastewater treatment systems expanded for anaerobic digester groups
inferred← citeshttps://doi.org/10.1093/femsec/fiw078openalex-snapshot
Phylogenetic diversity and ecophysiology of Candidate phylum Saccharibacteria in activated sludge
inferred← citeshttps://doi.org/10.1093/femsec/fix115openalex-snapshot
Eikelboom filamentous morphotypes 0675 and 0041 embrace members of the Chloroflexi: resolving their phylogeny, and design of fluorescence in situ hybridisation probes for their identification
inferred← citeshttps://doi.org/10.1093/femsec/fix134openalex-snapshot
High-throughput sequencing revealed novel Dehalococcoidia in dechlorinating microbial enrichments from PCB-contaminated marine sediments
inferred← citeshttps://doi.org/10.1093/femsec/fiy228openalex-snapshot
The morphology and metabolic potential of the Chloroflexi in full-scale activated sludge wastewater treatment plants
inferred← citeshttps://doi.org/10.1093/femsec/fiy231openalex-snapshot
Genomic insights into the metabolism of ‘CandidatusDefluviicoccus seviourii’, a member ofDefluviicoccuscluster III abundant in industrial activated sludge
inferred← citeshttps://doi.org/10.1099/ijsem.0.005498openalex-snapshot
Parvicella tangerina gen. nov., sp. nov. (Parvicellaceae fam. nov., Flavobacteriales), first cultured representative of the marine clade UBA10066, and Lysobacter luteus sp. nov., from activated sludge of a seawater-processing wastewater treatment plant
inferred← citeshttps://doi.org/10.1099/mgen.0.001823openalex-snapshot
An ode to the 16S rRNA gene: its history, importance, caveats and future in microbiome research
inferred← citeshttps://doi.org/10.1101/2020.09.01.277244openalex-snapshot
Research on the Influence of Different Temperature Conditions on the Microbial Community in Anearobic-Anoxic-Oxic process on the Plateau
inferred← citeshttps://doi.org/10.1101/2021.01.16.426983openalex-snapshot
Combined Enhanced Biological Phosphorus Removal (EBPR) and Nitrite Accumulation for Treating High-strength Wastewater
inferred← citeshttps://doi.org/10.1101/2023.03.24.534144openalex-snapshot
Production of extracellular polymeric substances in granular sludge under selection for Accumulibacter and Competibacter
inferred← citeshttps://doi.org/10.1101/2023.06.26.546617openalex-snapshot
Influence of DNA extraction methods on microbiome and resistome analysis in activated sludge
inferred← citeshttps://doi.org/10.1101/2023.08.24.554448openalex-snapshot
MiDAS 5: Global diversity of bacteria and archaea in anaerobic digesters
inferred← citeshttps://doi.org/10.1101/2025.05.01.651608openalex-snapshot
HUGMi: Human Uro-Genital Microbiome database and hybrid classifier for improved species level annotation of 16S rRNA amplicon sequences
inferred← citeshttps://doi.org/10.1101/214288openalex-snapshot
TaxAss: Leveraging a Custom Freshwater Database Achieves Fine-Scale Taxonomic Resolution
inferred← citeshttps://doi.org/10.1101/289645openalex-snapshot
Apparent oxygen half saturation constant for nitrifiers: genus specific, inherent physiological property, or artefact of colony morphology?
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