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The importance of digitized biocollections as a source of trait data and a new VertNet resource
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What this work says
Outgoing claims: the papers this work cites, builds on, or argues with.
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Use of Model Organism and Disease Databases to Support Matchmaking for Human Disease Gene Discovery
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An introduction to ROC analysis
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Text mining and its potential applications in systems biology
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Body size in ecological networks
inferredcites →https://doi.org/10.1016/j.tree.2011.01.009openalex-snapshot
Why intraspecific trait variation matters in community ecology
inferredcites →https://doi.org/10.1016/j.tree.2011.11.001openalex-snapshot
Evolutionary informatics: unifying knowledge about the diversity of life
inferredcites →https://doi.org/10.1016/j.tree.2011.11.007openalex-snapshot
Time to change how we describe biodiversity
inferredcites →https://doi.org/10.1017/cbo9780511608551openalex-snapshot
The Ecological Implications of Body Size
inferredcites →https://doi.org/10.1038/nature16476openalex-snapshot
Plant functional traits have globally consistent effects on competition
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Monitoring plant functional diversity from space
inferredcites →https://doi.org/10.1073/pnas.1415442111openalex-snapshot
The emergence and promise of functional biogeography
inferredcites →https://doi.org/10.1086/381872openalex-snapshot
Effects of Body Size and Temperature on Population Growth
inferredcites →https://doi.org/10.1093/bioinformatics/btn659openalex-snapshot
Biodiversity informatics: automated approaches for documenting global biodiversity patterns and processes
inferredcites →https://doi.org/10.1093/biosci/biv104openalex-snapshot
Digitization of Biodiversity Collections Reveals Biggest Data on Biodiversity
inferredcites →https://doi.org/10.1093/database/bas010openalex-snapshot
Argo: an integrative, interactive, text mining-based workbench supporting curation
inferredcites →https://doi.org/10.1093/database/baw005openalex-snapshot
EXTRACT: interactive extraction of environment metadata and term suggestion for metagenomic sample annotation
inferredcites →https://doi.org/10.1093/sysbio/syw010openalex-snapshot
Bridging Inter- and Intraspecific Trait Evolution with a Hierarchical Bayesian Approach
inferredcites →https://doi.org/10.1098/rstb.2015.0337openalex-snapshot
Biodiversity analysis in the digital era
inferredcites →https://doi.org/10.1111/gcb.13000openalex-snapshot
Intraspecific trait variation across scales: implications for understanding global change responses
inferredcites →https://doi.org/10.1111/j.1365-2486.2011.02451.xopenalex-snapshot
TRY – a global database of plant traits
inferredcites →https://doi.org/10.1111/j.2041-210x.2010.00067.xopenalex-snapshot
A generic structure for plant trait databases
inferredcites →https://doi.org/10.1111/mec.13529openalex-snapshot
Natural history collections as windows on evolutionary processes
inferredcites →https://doi.org/10.1126/science.1229931openalex-snapshot
Essential Biodiversity Variables
inferredcites →https://doi.org/10.1126/science.1260065openalex-snapshot
Cope’s rule in the evolution of marine animals
inferredcites →https://doi.org/10.1186/1471-2105-11-278openalex-snapshot
Semantic annotation of morphological descriptions: an overall strategy
inferredcites →https://doi.org/10.1186/1472-6785-13-16openalex-snapshot
A decadal view of biodiversity informatics: challenges and priorities
inferredcites →https://doi.org/10.1186/2041-1480-4-13openalex-snapshot
The Vertebrate Trait Ontology: a controlled vocabulary for the annotation of trait data across species
inferredcites →https://doi.org/10.1186/2041-1480-4-43openalex-snapshot
The environment ontology: contextualising biological and biomedical entities
inferredcites →https://doi.org/10.1186/gb-2012-13-1-r5openalex-snapshot
Uberon, an integrative multi-species anatomy ontology
inferredcites →https://doi.org/10.1186/s13326-016-0097-6openalex-snapshot
The environment ontology in 2016: bridging domains with increased scope, semantic density, and interoperation
inferredcites →https://doi.org/10.1371/journal.pbio.1000309openalex-snapshot
VertNet: A New Model for Biodiversity Data Sharing
inferredcites →https://doi.org/10.1371/journal.pbio.1002033openalex-snapshot
Finding Our Way through Phenotypes
inferredcites →https://doi.org/10.1371/journal.pone.0029715openalex-snapshot
Darwin Core: An Evolving Community-Developed Biodiversity Data Standard
inferredcites →https://doi.org/10.1371/journal.pone.0089550openalex-snapshot
Knowledge Extraction and Semantic Annotation of Text from the Encyclopedia of Life
inferredcites →https://doi.org/10.1371/journal.pone.0146894openalex-snapshot
A Standardized Reference Data Set for Vertebrate Taxon Name Resolution
inferredcites →https://doi.org/10.1371/journal.pone.0153749openalex-snapshot
A Natural Language Processing Tool for Large-Scale Data Extraction from Echocardiography Reports
inferredcites →https://doi.org/10.1577/1548-8659(1945)75[157:somoel]2.0.co;2openalex-snapshot
Standardization of Methods of Expressing Lengths and Weights of Fish
inferredcites →https://doi.org/10.1641/0006-3568(2004)054[0486:rasbot]2.0.co;2openalex-snapshot
Research and Societal Benefits of the Global Biodiversity Information Facility
inferredcites →https://doi.org/10.17161/bi.v7i2.3992openalex-snapshot
Natural History Specimen Digitization: Challenges and Concerns
inferredcites →https://doi.org/10.1890/08-1494.1openalex-snapshot
PanTHERIA: a species‐level database of life history, ecology, and geography of extant and recently extinct mammals
inferredcites →https://doi.org/10.1890/09-1672.1openalex-snapshot
Functional trait and phylogenetic tests of community assembly across spatial scales in an Amazonian forest
inferredcites →https://doi.org/10.1890/13-1917.1openalex-snapshot
EltonTraits 1.0: Species‐level foraging attributes of the world's birds and mammals
inferredcites →https://doi.org/10.2307/1368225openalex-snapshot
Bird Specimens and Documentation: Critical Data for a Critical Resource
inferredcites →https://doi.org/10.3233/sw-150190openalex-snapshot
TraitBank: Practical semantics for organism attribute data
inferredcites →https://doi.org/10.3897/bdj.2.e1125openalex-snapshot
Enriched biodiversity data as a resource and service
inferredcites →https://doi.org/10.3897/natureconservation.9.8908openalex-snapshot
Life-history trait database of European reptile species
inferredcites →https://doi.org/10.3897/zookeys.209.3313openalex-snapshot
Mass digitization of scientific collections: New opportunities to transform the use of biological specimens and underwrite biodiversity science
inferredcites →https://doi.org/10.3897/zookeys.494.9352openalex-snapshot
Community Next Steps for Making Globally Unique Identifiers Work for Biocollections Data
inferredcites →https://doi.org/10.48550/arxiv.2010.16061openalex-snapshot
Evaluation: from precision, recall and F-measure to ROC, informedness, markedness and correlation
inferredcites →https://doi.org/10.5860/choice.47-6243openalex-snapshot
Amphibian ecology and conservation: a handbook of techniques
What points at this work
Incoming claims: where this work appears in other papers’ reference lists and arguments.
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Patterns in research and data sharing for the study of form and function in caviomorph rodents
inferred← citeshttps://doi.org/10.1093/jmammal/gyae135zenodo-depositor-declared
Integrative species delimitation reveals an Idaho-endemic ground squirrel, Urocitellus idahoensis (Merriam 1913)
inferred← citeshttps://doi.org/10.11646/zootaxa.4695.5.2zenodo-depositor-declared
A global catalog of primary reptile type specimens
inferred← citeshttps://doi.org/10.1002/ajb2.1852openalex-snapshot
Digitized collections elucidate invasion history and patterns of awn polymorphism in Microstegium vimineum
inferred← citeshttps://doi.org/10.1002/aps3.11563openalex-snapshot
FloraTraiter: Automated parsing of traits from descriptive biodiversity literature
inferred← citeshttps://doi.org/10.1002/ecs2.4327openalex-snapshot
Sex‐specific breeding phenologies in the North American deer mouse (Peromyscus maniculatus)
inferred← citeshttps://doi.org/10.1007/978-3-030-86359-3_34openalex-snapshot
The Web Platform for Storing Biotechnologically Significant Properties of Bacterial Strains
inferred← citeshttps://doi.org/10.1016/j.ecoinf.2020.101206openalex-snapshot
Integration and harmonization of trait data from plant individuals across heterogeneous sources
inferred← citeshttps://doi.org/10.1016/j.gecco.2019.e00852openalex-snapshot
BDcleaner: A workflow for cleaning taxonomic and geographic errors in occurrence data archived in biodiversity databases
inferred← citeshttps://doi.org/10.1016/j.isci.2022.105101openalex-snapshot
A solution to the challenges of interdisciplinary aggregation and use of specimen-level trait data
inferred← citeshttps://doi.org/10.1038/s41559-018-0667-3openalex-snapshot
Towards global data products of Essential Biodiversity Variables on species traits
inferred← citeshttps://doi.org/10.1038/s41597-019-0189-0openalex-snapshot
PalmTraits 1.0, a species-level functional trait database of palms worldwide
inferred← citeshttps://doi.org/10.1038/s41598-020-65755-xopenalex-snapshot
Body size trends in response to climate and urbanization in the widespread North American deer mouse, Peromyscus maniculatus
inferred← citeshttps://doi.org/10.1038/s41598-021-02124-2openalex-snapshot
Rapid phenotypic change in a polymorphic salamander over 43 years
inferred← citeshttps://doi.org/10.1038/s42003-021-02505-3openalex-snapshot
Mammalian body size is determined by interactions between climate, urbanization, and ecological traits
inferred← citeshttps://doi.org/10.1093/biosci/biad060openalex-snapshot
Recent advances in availability and synthesis of the economic costs of biological invasions
inferred← citeshttps://doi.org/10.1093/biosci/biz163openalex-snapshot
Digitization and the Future of Natural History Collections
inferred← citeshttps://doi.org/10.1093/jmammal/gyaf062openalex-snapshot
Extending mammal specimens with their essential phenotypic traits
inferred← citeshttps://doi.org/10.1093/jmammal/gyag078openalex-snapshot
Uncovering historical small mammal biodiversity among the Madrean Sky Islands
inferred← citeshttps://doi.org/10.1093/jmammal/gyz057openalex-snapshot
Evolution of litter size in North America’s most common small mammal: an informatics-based approach
inferred← citeshttps://doi.org/10.1098/rstb.2017.0391openalex-snapshot
The history and impact of digitization and digital data mobilization on biodiversity research
inferred← citeshttps://doi.org/10.1101/2023.12.15.571899openalex-snapshot
Arctos: Community-driven innovations for managing biodiversity and cultural collections
inferred← citeshttps://doi.org/10.1101/328302openalex-snapshot
Towards an Ecological Trait-data Standard
inferred← citeshttps://doi.org/10.1111/1755-0998.13303openalex-snapshot
Predicting amphibian intraspecific diversity with machine learning: Challenges and prospects for integrating traits, geography, and genetic data
inferred← citeshttps://doi.org/10.1111/2041-210x.13288openalex-snapshot
Towards an ecological trait‐data standard
inferred← citeshttps://doi.org/10.1111/2041-210x.13864openalex-snapshot
A deep neural network for high‐throughput measurement of functional traits on museum skeletal specimens
inferred← citeshttps://doi.org/10.1111/ecog.06928openalex-snapshot
New insight into drivers of mammalian litter size from individual‐level traits
inferred← citeshttps://doi.org/10.1111/geb.13184openalex-snapshot
Global gaps in trait data for terrestrial vertebrates
inferred← citeshttps://doi.org/10.1111/geb.13275openalex-snapshot
Pitfalls of ignoring trait resolution when drawing conclusions about ecological processes
inferred← citeshttps://doi.org/10.1111/geb.13497openalex-snapshot
A review of the heterogeneous landscape of biodiversity databases: Opportunities and challenges for a synthesized biodiversity knowledge base
inferred← citeshttps://doi.org/10.1111/mam.12270openalex-snapshot
Limitations and gaps in global bat wing morphology trait data
inferred← citeshttps://doi.org/10.1242/jeb.247981openalex-snapshot
Integrating animal tracking and trait data to facilitate global ecological discoveries
inferred← citeshttps://doi.org/10.1371/journal.pcbi.1014753openalex-snapshot
Eight quick tips for requesting materials from natural history collections
inferred← citeshttps://doi.org/10.1371/journal.pone.0215369openalex-snapshot
ZooArchNet: Connecting zooarchaeological specimens to the biodiversity and archaeology data networks
inferred← citeshttps://doi.org/10.1371/journal.pone.0296478openalex-snapshot
Arctos: Community-driven innovations for managing natural and cultural history collections
inferred← citeshttps://doi.org/10.18699/vj18.360openalex-snapshot
AN INTEGRATED INFORMATION SYSTEM ON BIORESOURCE COLLECTIONS OF THE FASO OF RUSSIA
inferred← citeshttps://doi.org/10.3390/taxonomy4040038openalex-snapshot
A Reference Database of Reptile Images
inferred← citeshttps://doi.org/10.3897/bdj.11.e101960openalex-snapshot
Insect collecting bias in Arizona with a preliminary checklist of the beetles from the Sand Tank Mountains
inferred← citeshttps://doi.org/10.56060/bdv.2023.2.2.2096openalex-snapshot
What a Rich BIOTROP: Development Database Framework of Biodiversity Heritage Collections
inferred← citeshttps://doi.org/10.7554/elife.27166openalex-snapshot
No general relationship between mass and temperature in endothermic species
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