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Monitoring the dynamics of syntrophic β-oxidizing bacteria during anaerobic degradation of oleic acid by quantitative PCR

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What this work says

Outgoing claims: the papers this work cites, builds on, or argues with.

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Microbial population dynamics during start‐up and overload conditions of anaerobic digesters treating municipal solid waste and sewage sludge

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Mineralization of LCFA associated with anaerobic sludge: Kinetics, enhancement of methanogenic activity, and effect of VFA

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Group‐specific primer and probe sets to detect methanogenic communities using quantitative real‐time polymerase chain reaction

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Anaerobic biodegradation of oleic and palmitic acids: Evidence of mass transfer limitations caused by long chain fatty acid accumulation onto the anaerobic sludge

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Responses of the biogas process to pulses of oleate in reactors treating mixtures of cattle and pig manure

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Mechanism of inhibition caused by long‐chain fatty acids in anaerobic digestion process

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Degradation of phenol under meso- and thermophilic, anaerobic conditions

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The Family Halomonadaceae

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Effects of free long-chain fatty acids on thermophilic anaerobic digestion

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Syntrophus aciditrophicus sp. nov., a new anaerobic bacterium that degrades fatty acids and benzoate in syntrophic association with hydrogen-using microorganisms

inferredcites →https://doi.org/10.1007/s00253-012-4061-9openalex-snapshot

Endurance of methanogenic archaea in anaerobic bioreactors treating oleate-based wastewater

inferredcites →https://doi.org/10.1016/0043-1354(76)90151-2openalex-snapshot

Biochemical mechanisms in the methane fermentation of glutamic and oleic acids

inferredcites →https://doi.org/10.1016/j.biortech.2007.09.005openalex-snapshot

Enhancement of methane production from long chain fatty acid based effluents

inferredcites →https://doi.org/10.1016/j.biortech.2008.06.029openalex-snapshot

Increased biogas production at wastewater treatment plants through co-digestion of sewage sludge with grease trap sludge from a meat processing plant

inferredcites →https://doi.org/10.1016/j.biortech.2009.04.046openalex-snapshot

Strategies for recovering inhibition caused by long chain fatty acids on anaerobic thermophilic biogas reactors

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Long-chain fatty acids inhibition and adaptation process in anaerobic thermophilic digestion: Batch tests, microbial community structure and mathematical modelling

inferredcites →https://doi.org/10.1016/j.biortech.2011.12.020openalex-snapshot

Effect of continuous oleate addition on microbial communities involved in anaerobic digestion process

inferredcites →https://doi.org/10.1016/j.syapm.2006.12.001openalex-snapshot

Syntrophomonas wolfei subsp. methylbutyratica subsp. nov., and assignment of Syntrophomonas wolfei subsp. saponavida to Syntrophomonas saponavida sp. nov. comb. nov.

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Co-digestion of grease trap sludge and sewage sludge

inferredcites →https://doi.org/10.1016/j.watres.2006.12.036openalex-snapshot

Functional bacterial and archaeal community structures of major trophic groups in a full-scale anaerobic sludge digester

inferredcites →https://doi.org/10.1016/j.watres.2008.09.032openalex-snapshot

Quantitative analysis of methanogenic community dynamics in three anaerobic batch digesters treating different wastewaters

inferredcites →https://doi.org/10.1016/j.watres.2012.01.034openalex-snapshot

Quantitative detection of previously characterized syntrophic bacteria in anaerobic wastewater treatment systems by sequence-specific rRNA cleavage method

inferredcites →https://doi.org/10.1016/j.watres.2013.04.003openalex-snapshot

Determining the limits of anaerobic co-digestion of thickened waste activated sludge with grease interceptor waste

inferredcites →https://doi.org/10.1016/s0021-9673(02)00647-7openalex-snapshot

Analysis of mono- and diesters of o-phthalic acid by solid-phase extractions with polystyrene–divinylbenzene-based polymers

inferredcites →https://doi.org/10.1016/s0043-1354(00)00180-9openalex-snapshot

Anaerobic degradation and inhibitory effects of linoleic acid

inferredcites →https://doi.org/10.1016/s0043-1354(00)00438-3openalex-snapshot

Anaerobic codigestion of municipal solid waste and biosolids under various mixing conditions—II: microbial population dynamics

inferredcites →https://doi.org/10.1016/s0043-1354(00)00593-5openalex-snapshot

Anaerobic degradation and methanogenic inhibitory effects of oleic and stearic acids

inferredcites →https://doi.org/10.1016/s0043-1354(02)00014-3openalex-snapshot

Effects of C18 long chain fatty acids on glucose, butyrate and hydrogen degradation

inferredcites →https://doi.org/10.1016/s0141-0229(97)00050-1openalex-snapshot

Acute toxicity of oleate to acetate-utilizing methanogens in mesophilic and thermophilic anaerobic sludges

inferredcites →https://doi.org/10.1021/es8031264openalex-snapshot

Continuous High Rate Anaerobic Treatment of Oleic Acid Based Wastewater is Possible after a Step Feeding Start-Up

inferredcites →https://doi.org/10.1038/ismej.2011.59openalex-snapshot

Identification of a novel acetate-utilizing bacterium belonging to Synergistes group 4 in anaerobic digester sludge

inferredcites →https://doi.org/10.1038/ismej.2013.187openalex-snapshot

Single-cell genome and metatranscriptome sequencing reveal metabolic interactions of an alkane-degrading methanogenic community

inferredcites →https://doi.org/10.1038/nature07840openalex-snapshot

Initial community evenness favours functionality under selective stress

inferredcites →https://doi.org/10.1038/nmeth.f.303openalex-snapshot

QIIME allows analysis of high-throughput community sequencing data

inferredcites →https://doi.org/10.1046/j.1365-2958.2003.03341.xopenalex-snapshot

A new Escherichia coli metabolic competency: growth on fatty acids by a novel anaerobic β‐oxidation pathway

inferredcites →https://doi.org/10.1078/0723-2020-00122openalex-snapshot

A Detailed Phenotypic Characterisation of the Type Strains of Halomonas Species

inferredcites →https://doi.org/10.1093/bioinformatics/btp033openalex-snapshot

Jalview Version 2—a multiple sequence alignment editor and analysis workbench

inferredcites →https://doi.org/10.1093/bioinformatics/btp636openalex-snapshot

PyNAST: a flexible tool for aligning sequences to a template alignment

inferredcites →https://doi.org/10.1093/bioinformatics/btq461openalex-snapshot

Search and clustering orders of magnitude faster than BLAST

inferredcites →https://doi.org/10.1093/bioinformatics/btr381openalex-snapshot

UCHIME improves sensitivity and speed of chimera detection

inferredcites →https://doi.org/10.1093/nar/gkn879openalex-snapshot

The Ribosomal Database Project: improved alignments and new tools for rRNA analysis

inferredcites →https://doi.org/10.1093/nar/gks808openalex-snapshot

Evaluation of general 16S ribosomal RNA gene PCR primers for classical and next-generation sequencing-based diversity studies

inferredcites →https://doi.org/10.1099/00207713-43-2-278openalex-snapshot

Assignment of Fatty Acid- -Oxidizing Syntrophic Bacteria to Syntrophomonadaceae fam. nov. on the Basis of 16S rRNA Sequence Analyses

inferredcites →https://doi.org/10.1099/00207713-46-4-1131openalex-snapshot

Thermosyntropha lipolytica gen. nov., sp. nov., a Lipolytic, Anaerobic, Alkalitolerant, Thermophilic Bacterium Utilizing Short- and Long-Chain Fatty Acids in Syntrophic Coculture with a Methanogenic Archaeum

inferredcites →https://doi.org/10.1099/00207713-50-2-771openalex-snapshot

Syntrophothermus lipocalidus gen. nov., sp. nov., a novel thermophilic, syntrophic, fatty-acid-oxidizing anaerobe which utilizes isobutyrate.

inferredcites →https://doi.org/10.1099/ijs.0.033456-0openalex-snapshot

Thermosyntropha tengcongensis sp. nov., a thermophilic bacterium that degrades long-chain fatty acids syntrophically

inferredcites →https://doi.org/10.1099/ijs.0.64734-0openalex-snapshot

Syntrophomonas zehnderi sp. nov., an anaerobe that degrades long-chain fatty acids in co-culture with Methanobacterium formicicum

inferredcites →https://doi.org/10.1099/ijs.0.64981-0openalex-snapshot

Syntrophomonas palmitatica sp. nov., an anaerobic, syntrophic, long-chain fatty-acid-oxidizing bacterium isolated from methanogenic sludge

inferredcites →https://doi.org/10.1111/1574-6941.12148openalex-snapshot

454 pyrosequencing analyses of bacterial and archaeal richness in 21 full-scale biogas digesters

inferredcites →https://doi.org/10.1111/j.1462-2920.2011.02570.xopenalex-snapshot

The quantitative significance of Syntrophaceae and syntrophic partnerships in methanogenic degradation of crude oil alkanes

inferredcites →https://doi.org/10.1111/j.1574-6941.2007.00291.xopenalex-snapshot

Molecular assessment of complex microbial communities degrading long chain fatty acids in methanogenic bioreactors

inferredcites →https://doi.org/10.1111/j.1574-6941.2009.00680.xopenalex-snapshot

Ecophysiology of syntrophic communities that degrade saturated and unsaturated long-chain fatty acids

inferredcites →https://doi.org/10.1111/j.1758-2229.2011.00249.xopenalex-snapshot

Quantification of syntrophic acetate‐oxidizing microbial communities in biogas processes

inferredcites →https://doi.org/10.1128/aem.00035-13openalex-snapshot

Activity and Viability of Methanogens in Anaerobic Digestion of Unsaturated and Saturated Long-Chain Fatty Acids

inferredcites →https://doi.org/10.1128/aem.00062-07openalex-snapshot

Naive Bayesian Classifier for Rapid Assignment of rRNA Sequences into the New Bacterial Taxonomy

inferredcites →https://doi.org/10.1128/aem.00362-07openalex-snapshot

Diversity of Anaerobic Microorganisms Involved in Long-Chain Fatty Acid Degradation in Methanogenic Sludges as Revealed by RNA-Based Stable Isotope Probing

inferredcites →https://doi.org/10.1128/aem.02692-09openalex-snapshot

High Abundance of Ammonia-OxidizingArchaeain Coastal Waters, Determined Using a Modified DNA Extraction Method

inferredcites →https://doi.org/10.1128/aem.03006-05openalex-snapshot

Greengenes, a Chimera-Checked 16S rRNA Gene Database and Workbench Compatible with ARB

inferredcites →https://doi.org/10.1128/aem.53.2.403-409.1987openalex-snapshot

Inhibition of Methanogenesis from Acetate in Granular Sludge by Long-Chain Fatty Acids

inferredcites →https://doi.org/10.1128/aem.65.11.4767-4774.1999openalex-snapshot

Quantification of Syntrophic Fatty Acid-β-Oxidizing Bacteria in a Mesophilic Biogas Reactor by Oligonucleotide Probe Hybridization

inferredcites →https://doi.org/10.1128/aem.71.12.8228-8235.2005openalex-snapshot

UniFrac: a New Phylogenetic Method for Comparing Microbial Communities

inferredcites →https://doi.org/10.1128/aem.72.2.1623-1630.2006openalex-snapshot

Dynamic Transition of a Methanogenic Population in Response to the Concentration of Volatile Fatty Acids in a Thermophilic Anaerobic Digester

inferredcites →https://doi.org/10.1128/mmbr.61.2.262-280.1997openalex-snapshot

Energetics of syntrophic cooperation in methanogenic degradation

inferredcites →https://doi.org/10.1264/jsme2.me09151sopenalex-snapshot

Cultivation of Uncultured Chloroflexi Subphyla: Significance and Ecophysiology of Formerly Uncultured Chloroflexi 'Subphylum I' with Natural and Biotechnological Relevance

inferredcites →https://doi.org/10.1373/clinchem.2008.112797openalex-snapshot

The MIQE Guidelines: Minimum Information for Publication of Quantitative Real-Time PCR Experiments

inferredcites →https://doi.org/10.2144/000114043openalex-snapshot

Continuous Fluorescence Monitoring of Rapid Cycle DNA Amplification

inferredcites →https://doi.org/10.2144/97221bi01openalex-snapshot

Continuous Fluorescence Monitoring of Rapid Cycle DNA Amplification

inferredcites →https://doi.org/10.2166/wst.2002.0019openalex-snapshot

Microbiological quality of a waste stabilization pond effluent used for restricted irrigation in Valle Del Cauca, Colombia

inferredcites →https://doi.org/10.2166/wst.2002.0311openalex-snapshot

Anaerobic degradation of oleic acid by suspended and granular sludge: identification of palmitic acid as a key intermediate

inferredcites →https://doi.org/10.2166/wst.2003.0352openalex-snapshot

Accumulation of long chain fatty acids onto anaerobic sludge under steady state and shock loading conditions: effect on acetogenic and methanogenic activity

inferredcites →https://doi.org/10.2166/wst.2006.483openalex-snapshot

Detection of fatty acid beta-oxidizing syntrophic bacteria by fluorescence in situ hybridization

inferredcites →https://doi.org/10.2166/wst.2006.613openalex-snapshot

From point to areal rainfall: linking the different approaches for the frequency characterisation of rainfalls in urban areas

inferredcites →https://doi.org/10.2174/1875036201307010001openalex-snapshot

Comparison of Sequencing Utility Programs

inferredcites →https://doi.org/10.2175/wer.66.1.7openalex-snapshot

Bactericidal effect of long chain fatty acids in anaerobic digestion

What points at this work

Incoming claims: where this work appears in other papers’ reference lists and arguments.

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Effects of ammonia on propionate degradation and microbial community in digesters using propionate as a sole carbon source

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Biogas Production: Microbiology and Technology

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Bioaugmentation

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Metabolic Engineering: A Tool to Increase the Methane Yield and Efficiency of Anaerobic Digestion Process

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Performance and Microbial Community Analysis in an Anaerobic Hybrid Baffled Reactor Treating Dairy Wastewater

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Feasibility of OFMSW co-digestion with sewage sludge for increasing biogas production at wastewater treatment plants

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Effect of feed-to-inoculum ratio on anaerobic digestibility of high-fat content animal rendering wastewater

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Enhancing anaerobic digestion performance of crude lipid in food waste by enzymatic pretreatment

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Depth-resolved microbial community analyses in the anaerobic co-digester of dewatered sewage sludge with food waste

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Microbial community response to temperature reduction during anaerobic treatment of long chain fatty acids-containing wastewater

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Performance and microbial community dynamics in full-scale anaerobic co-digesters fed with fats, oils and grease

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Performance of anaerobic co-digestion with honey processing wastewater as co-substrate for treating synthetic wastewater containing commercial anthraquinone dye Remazol blue RSP: Effect of C:N ratio and HRT

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Palmitic acid accumulation limits methane production in anaerobic co-digestion of fats, oils and grease with municipal wastewater sludge

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Electrocoagulation-electroflotation for primary treatment of animal rendering wastewater to enable recovery of fats

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Evaluation of electrical current production in microbial electrolysis cells fed with animal rendering wastewater

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Importance of sulfide interaction with iron as regulator of the microbial community in biogas reactors and its effect on methanogenesis, volatile fatty acids turnover, and syntrophic long-chain fatty acids degradation

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Changes in the microbial community during the acclimation process of anaerobic digestion for treatment of synthetic lipid-rich wastewater

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Anti-fouling and adaptation of an AnMBR with in-situ electro-cleaning using intermittent high-voltage

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Anaerobic co-digestion of municipal waste sludge with grease trap waste mixture: Point of process failure determination

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Fractional factorial experimental design for optimizing volatile fatty acids from anaerobic fermentation of municipal sludge: Microbial community and activity investigation

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Zero-valent iron mediated alleviation of methanogenesis inhibition induced by organoarsenic roxarsone

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Microbial community adaptation influences long-chain fatty acid conversion during anaerobic codigestion of fats, oils, and grease with municipal sludge

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Long-chain fatty acid feeding frequency in anaerobic codigestion impacts syntrophic community structure and biokinetics

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Elucidating microbial community adaptation to anaerobic co-digestion of fats, oils, and grease and food waste

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Novel insights into the anaerobic digestion of propionate via Syntrophobacter fumaroxidans and Geobacter sulfurreducens: Process and mechanism

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Principles, Advances, and Perspectives of Anaerobic Digestion of Lipids

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Taxonomic and Functional Variations Induced by an Overloading Event in Anaerobic Codigestion of Municipal Wastewater Sludge with Fats, Oils, and Grease

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Microbial Community Organization during Anaerobic Pulp and Paper Mill Wastewater Treatment

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Discovery of a Microbial Carrier with High Adsorption Affinity for Syntrophic Long-Chain Fatty Acid-Degrading Microorganisms

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DNA-SIP based genome-centric metagenomics identifies key long-chain fatty acid-degrading populations in anaerobic digesters with different feeding frequencies

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Diverse electron carriers drive syntrophic interactions in an enriched anaerobic acetate-oxidizing consortium

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Dynamic functional characterization and phylogenetic changes due to Long Chain Fatty Acids pulses in biogas reactors

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Microbial Community Structures in Family Anaerobic Digesters Reveal Potentially Differing Waste Conversion Pathways

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Microbial rRNA gene expression and co‐occurrence profiles associate with biokinetics and elemental composition in full‐scale anaerobic digesters

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Elucidating Syntrophic Butyrate-Degrading Populations in Anaerobic Digesters Using Stable-Isotope-Informed Genome-Resolved Metagenomics

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Acetotrophic Activity Facilitates Methanogenesis from LCFA at Low Temperatures: Screening from Mesophilic Inocula

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Sulfide level in municipal sludge digesters affects microbial community response to long-chain fatty acid loads

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Effluent solids recirculation to municipal sludge digesters enhances long-chain fatty acids degradation capacity

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Species-specific Primer and Probe Sets for Detection of Syntrophic Long-chain Fatty Acid-degrading Bacteria in Anaerobic Digestion Using Quantitative PCR

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Enhanced Methanization of Long-Chain Fatty Acid Wastewater at 20°C in the Novel Dynamic Sludge Chamber–Fixed Film Bioreactor

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Performance of Anaerobic Digestion of Acidified Palm Oil Mill Effluent under Various Organic Loading Rates and Temperatures

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Additional file 1 of Effluent solids recirculation to municipal sludge digesters enhances long-chain fatty acids degradation capacity

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