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Digging into the Genomic Past of Swiss Honey Bees by Whole-Genome Sequencing Museum Specimens
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Outgoing claims: the papers this work cites, builds on, or argues with.
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Introduction to Conservation Genetics
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inferredcites →https://doi.org/10.1051/apido:19990210openalex-snapshot
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Effects of Intracolonial Genetic Diversity on Honey Bee (Hymenoptera: Apidae) Colony Performance
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Fast and accurate short read alignment with Burrows–Wheeler transform
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The Sequence Alignment/Map format and SAMtools
inferredcites →https://doi.org/10.1093/bioinformatics/btr330openalex-snapshot
The variant call format and VCFtools
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Autosomal and Mitochondrial Adaptation Following Admixture: A Case Study on the Honeybees of Reunion Island
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Genome Sequencing of Museum Specimens Reveals Rapid Changes in the Genetic Composition of Honey Bees in California
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selscan: An Efficient Multithreaded Program to Perform EHH-Based Scans for Positive Selection
inferredcites →https://doi.org/10.1093/nar/gkm415openalex-snapshot
DAVID Bioinformatics Resources: expanded annotation database and novel algorithms to better extract biology from large gene lists
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Bioinformatics enrichment tools: paths toward the comprehensive functional analysis of large gene lists
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Removal of deaminated cytosines and detection of in vivo methylation in ancient DNA
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Median-joining networks for inferring intraspecific phylogenies
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Mutation of linotte causes behavioral defects independently of pigeon in Drosophila
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The Genome Analysis Toolkit: A MapReduce framework for analyzing next-generation DNA sequencing data
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High rates of phasing errors in highly polymorphic species with low levels of linkage disequilibrium
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inferredcites →https://doi.org/10.1111/1755-0998.12660openalex-snapshot
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inferredcites →https://doi.org/10.1111/2041-210x.12410openalex-snapshot
popart : full‐feature software for haplotype network construction
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Genome‐wide scans between two honeybee populations reveal putative signatures of human‐mediated selection
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Valuing museum specimens: high-throughput DNA sequencing on historical collections of New Guinea crowned pigeons (Goura)
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Developing reduced SNP assays from whole‐genome sequence data to estimate introgression in an organism with complex genetic patterns, the Iberian honeybee (Apis mellifera iberiensis)
inferredcites →https://doi.org/10.1111/j.1365-294x.2010.04569.xopenalex-snapshot
Six quantitative trait loci influence task thresholds for hygienic behaviour in honeybees (Apis mellifera)
inferredcites →https://doi.org/10.1111/j.1365-294x.2012.05614.xopenalex-snapshot
Management increases genetic diversity of honey bees via admixture
inferredcites →https://doi.org/10.1111/j.1365-294x.2012.05664.xopenalex-snapshot
The biogeography of mitochondrial and nuclear discordance in animals
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ESTIMATING F -STATISTICS FOR THE ANALYSIS OF POPULATION STRUCTURE
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Strikingly high levels of heterozygosity despite 20 years of inbreeding in a clonal honey bee
inferredcites →https://doi.org/10.1111/mec.12332openalex-snapshot
Admixture increases diversity in managed honey bees: Reply to De la Rúa et al. (2013)
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Conserving genetic diversity in the honeybee: Comments on Harpur et al. (2012)
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Recent progress and challenges in population genetics of polyploid organisms: an overview of current state‐of‐the‐art molecular and statistical tools
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The genomic basis of adaptation to high‐altitude habitats in the eastern honey bee ( Apis cerana )
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Extensive Diversity of Ig-Superfamily Proteins in the Immune System of Insects
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Genetic Diversity in Honey Bee Colonies Enhances Productivity and Fitness
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Bee declines driven by combined stress from parasites, pesticides, and lack of flowers
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The Chromosomes in Relation to the Determination of Sex in Insects
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Dead or Alive: Deformed Wing Virus and Varroa destructor Reduce the Life Span of Winter Honeybees
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Honey Bee Toxicology
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Detecting Natural Selection in Genomic Data
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The Sublethal Effects of Pesticides on Beneficial Arthropods
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inferredcites →https://doi.org/10.1371/journal.pone.0219293openalex-snapshot
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Cutadapt removes adapter sequences from high-throughput sequencing reads
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inferredcites →https://doi.org/10.4161/fly.19695openalex-snapshot
A program for annotating and predicting the effects of single nucleotide polymorphisms, SnpEff
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What points at this work
Incoming claims: where this work appears in other papers’ reference lists and arguments.
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A queen’s tale: Assessing the hidden potential of beeswax specimens in Natural History Museum collections
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Genetic variants associated with hantavirus infection in a reservoir host are related to regulation of inflammation and immune surveillance
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AmelHap: Leveraging drone whole-genome sequence data to create a honey bee HapMap
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Biogeography from a food matrix: a temporal distribution map of Apis mellifera mitochondrial DNA lineages across Italy, obtained from honey samples
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Whole-genome sequencing data confirms the uniqueness of Ireland’s native honey bee
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Highlight: Museum Specimens Reveal the Secret Diversity of Bees
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inferred← citeshttps://doi.org/10.1093/molbev/msae249openalex-snapshot
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inferred← citeshttps://doi.org/10.1101/2023.04.24.538033openalex-snapshot
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inferred← citeshttps://doi.org/10.1111/1755-0998.13505openalex-snapshot
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inferred← citeshttps://doi.org/10.1111/1755-0998.13665openalex-snapshot
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inferred← citeshttps://doi.org/10.1111/age.13070openalex-snapshot
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inferred← citeshttps://doi.org/10.1111/csp2.13095openalex-snapshot
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inferred← citeshttps://doi.org/10.1186/s12864-025-12435-7openalex-snapshot
Whole-genome sequencing of Apis mellifera lamarckii: first comprehensive genomic atlas of Egyptian honeybees reveals pathogen resistance mechanisms and local adaptation signatures
inferred← citeshttps://doi.org/10.1186/s12896-026-01199-xopenalex-snapshot
First breed-pool whole genome sequencing of egyptian sheep: a comprehensive genomic atlas revealing diversity and candidate genes for production and adaptation
inferred← citeshttps://doi.org/10.1186/s13059-024-03459-5openalex-snapshot
GenomeDelta: detecting recent transposable element invasions without repeat library
inferred← citeshttps://doi.org/10.1371/journal.pbio.3002333openalex-snapshot
Genomes from historical Drosophila melanogaster specimens illuminate adaptive and demographic changes across more than 200 years of evolution
inferred← citeshttps://doi.org/10.14411/eje.2026.008openalex-snapshot
Optimization of DNA extraction for insect museomics substantially increases DNA yield
inferred← citeshttps://doi.org/10.3389/fgene.2022.1010456openalex-snapshot
Evolutionary genomics: Insights from the invasive European starlings
inferred← citeshttps://doi.org/10.3389/fgene.2025.1740301openalex-snapshot
Omics in mini-livestock: a genomic perspective on the future of sustainable food systems
inferred← citeshttps://doi.org/10.3390/ani11051311openalex-snapshot
Whole-Genome Sequence Analysis of Italian Honeybees (Apis mellifera)
inferred← citeshttps://doi.org/10.3390/ani14111629openalex-snapshot
Tracing the Dynamical Genetic Diversity Changes of Russian Livni Pigs during the Last 50 Years with the Museum, Old, and Modern Samples
inferred← citeshttps://doi.org/10.3390/ani15213103openalex-snapshot
Conservation of Native Livestock Breeds in Russia: Current State and Promising Prospects
inferred← citeshttps://doi.org/10.3390/genes13020182openalex-snapshot
Population Structure and Diversity in European Honey Bees (Apis mellifera L.)—An Empirical Comparison of Pool and Individual Whole-Genome Sequencing
inferred← citeshttps://doi.org/10.3390/insects12060542openalex-snapshot
Historical Changes in Honey Bee Wing Venation in Romania
inferred← citeshttps://doi.org/10.3390/insects12090767openalex-snapshot
MtDNA Analysis Indicates Human-Induced Temporal Changes of Serbian Honey Bees Diversity
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