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Speciation Generates Mosaic Genomes in Kangaroos

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What this work says

Outgoing claims: the papers this work cites, builds on, or argues with.

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Differing impact of a major biogeographic barrier on genetic structure in two large kangaroos from the monsoon tropics of Northern Australia
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Undermethylation associated with retroelement activation and chromosome remodelling in an interspecific mammalian hybrid
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Erratum: corrigendum: Undermethylation associated with retroelement activation and chromosome remodelling in an interspecific mammalian hybrid
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The sequence and de novo assembly of the giant panda genome
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Gibbon genome and the fast karyotype evolution of small apes
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Morphological and molecular convergences in mammalian phylogenetics
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Resolving kangaroo phylogeny and overcoming retrotransposon ascertainment bias
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Intraspecific variation, sex-biased dispersal and phylogeography of the eastern grey kangaroo (Macropus giganteus)
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The evolutionary history of bears is characterized by gene flow across species
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Versatile primers for the amplification of the mitochondrial DNA control region in marsupials
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New potassium‐argon basalt date in relation to the Pliocene Bluff Downs Local Fauna, northern Australia
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Taxonomy of Australian Mammals
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A phylogeny and timescale for the living genera of kangaroos and kin (Macropodiformes : Marsupialia) based on nuclear DNA sequences
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Hybrids in Marsupial Research
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Speciation with gene flow in equids despite extensive chromosomal plasticity
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Fast and accurate short read alignment with Burrows–Wheeler transform
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Qualimap: evaluating next-generation sequencing alignment data
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RAxML version 8: a tool for phylogenetic analysis and post-analysis of large phylogenies
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Trimmomatic: a flexible trimmer for Illumina sequence data
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ASTRAL: genome-scale coalescent-based species tree estimation
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Cytogenetics Meets Phylogenetics: A Review of Karyotype Evolution in Diprotodontian Marsupials
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Haldane's Rule in Marsupials: What Happens When Both Sexes Are Functionally Hemizygous?
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Application of Phylogenetic Networks in Evolutionary Studies
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PAML 4: Phylogenetic Analysis by Maximum Likelihood
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Mammalian Evolution May not Be Strictly Bifurcating
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Testing for Ancient Admixture between Closely Related Populations
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MAFFT Multiple Sequence Alignment Software Version 7: Improvements in Performance and Usability
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Molecular Phylogeny, Biogeography, and Habitat Preference Evolution of Marsupials
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Fast Coalescent-Based Computation of Local Branch Support from Quartet Frequencies
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Reconstructing mitochondrial genomes directly from genomic next-generation sequencing reads—a baiting and iterative mapping approach
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Relationships between gene trees and species trees.
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Phylogenomic evidence for ancient hybridization in the genomes of living cats (Felidae)
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Isolation of High-Molecular-Weight DNA from Mammalian Blood Using Proteinase K and Phenol
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Isolation of High-molecular-weight DNA from Mammalian Cells Using Proteinase K and Phenol
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Resolution of portions of the kangaroo phylogeny (Marsupialia: Macropodidae) using DNA hybridization
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An osteology-based appraisal of the phylogeny and evolution of kangaroos and wallabies (Macropodidae: Marsupialia)
inferredcites →https://doi.org/10.1111/j.1365-294x.2012.05664.xopenalex-snapshot
The biogeography of mitochondrial and nuclear discordance in animals
inferredcites →https://doi.org/10.1111/zsc.12213openalex-snapshot
The phylogenomic forest of bird trees contains a hard polytomy at the root of Neoaves
inferredcites →https://doi.org/10.1126/science.1188021openalex-snapshot
A Draft Sequence of the Neandertal Genome
inferredcites →https://doi.org/10.1126/science.1216424openalex-snapshot
Nuclear Genomic Sequences Reveal that Polar Bears Are an Old and Distinct Bear Lineage
inferredcites →https://doi.org/10.1146/annurev-earth-040809-152402openalex-snapshot
Evolution of Grasses and Grassland Ecosystems
inferredcites →https://doi.org/10.1146/annurev.ecolsys.33.010802.150509openalex-snapshot
Troubleshooting Molecular Phylogenetic Analyses
inferredcites →https://doi.org/10.1186/1471-2105-12-124openalex-snapshot
Proteinortho: Detection of (Co-)orthologs in large-scale analysis
inferredcites →https://doi.org/10.1186/1471-2148-9-83openalex-snapshot
Mitochondrial phylogeography of baboons (Papiospp.) – Indication for introgressive hybridization?
inferredcites →https://doi.org/10.1186/1471-2164-15-786openalex-snapshot
A transcriptome resource for the koala (Phascolarctos cinereus): insights into koala retrovirus transcription and sequence diversity
inferredcites →https://doi.org/10.1186/1471-2164-15-s1-s2openalex-snapshot
Proposing a highly accurate protein structural class predictor using segmentation-based features
inferredcites →https://doi.org/10.1186/gb-2011-12-8-r81openalex-snapshot
Genome sequence of an Australian kangaroo, Macropus eugenii, provides insight into the evolution of mammalian reproduction and development
inferredcites →https://doi.org/10.1371/journal.pone.0057745openalex-snapshot
Inferring Kangaroo Phylogeny from Incongruent Nuclear and Mitochondrial Genes
inferredcites →https://doi.org/10.1371/journal.pone.0134738openalex-snapshot
Draft De Novo Transcriptome of the Rat Kangaroo Potorous tridactylus as a Tool for Cell Biology
inferredcites →https://doi.org/10.1371/journal.pone.0154665openalex-snapshot
Mitochondrial Genome and Nuclear Markers Provide New Insight into the Evolutionary History of Macaques
inferredcites →https://doi.org/10.1534/genetics.107.082313openalex-snapshot
Genomic Instability Within Centromeres of Interspecific Marsupial Hybrids
inferredcites →https://doi.org/10.18814/epiiugs/2004/v27i2/002openalex-snapshot
A new Geologic Time Scale, with special reference to Precambrian and Neogene
inferredcites →https://doi.org/10.5281/zenodo.16232432openalex-snapshot
The genus Macropus Shaw (Marsupialia: Macropodidae) in the Upper Cainozoic deposits of Queensland
inferredcites →https://doi.org/10.5962/p.263125openalex-snapshot
Continuity and contrast in middle and late Miocene vertebrate communities from the Northern Territory
inferredcites →https://doi.org/10.7312/nei-92038openalex-snapshot
Molecular Evolutionary Genetics

What points at this work

Incoming claims: where this work appears in other papers’ reference lists and arguments.

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Identification of a novel hybrid zone within the black-footed rock-wallaby (Petrogale lateralis) in Western Australia
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Reconstructing the Evolution of Giant Extinct Kangaroos: Comparing the Utility of DNA, Morphology, and Total Evidence
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A molecular and morphometric assessment of the systematics of the Macropus complex clarifies the tempo and mode of kangaroo evolution
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Incorporating uncertainty is essential to macroecological inferences: Grass, grit, and the evolution of kangaroos
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pgHMA: Application of the heteroduplex mobility assay analysis in phylogenetics and population genetics
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Marsupial genome analysis suggests that satellite DNA formation from walb endogenous retrovirus is an event specific to the red‐necked wallaby
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Evolution of diet in extant marsupials: emergent patterns from a broad phylogenetic perspective
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Genomic divergence and introgression between cryptic species of a widespread North American songbird
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Rapid Pliocene adaptive radiation of modern kangaroos
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Marsupial satellite DNA as faithful reflections of long-terminal repeat retroelement structure
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The genome of the pygmy right whale illuminates the evolution of rorquals
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Multiplex PCRs for the specific identification of marsupial and deer species from faecal samples as a basis for non-invasive epidemiological studies of parasites
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The application of baleen whale genomes in conservation and evolutionary research
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Diversification of kangaroos and broader turnover among marsupial terrestrial herbivores coincided with emerging aridification then incipient grasslands
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A 16S Next Generation Sequencing Based Molecular and Bioinformatics Pipeline to Identify Processed Meat Products Contamination and Mislabelling
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Gene Flow and Diversification in Himalopsyche martynovi Species Complex (Trichoptera: Rhyacophilidae) in the Hengduan Mountains
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Identifying Complex DNA Contamination in Pig-Footed Bandicoots Helps to Clarify an Anomalous Ecological Transition
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