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Identification and characterization of an ancient class of small RNAs enriched in serum associating with active infection

https://doi.org/10.1093/jmcb/mjt052
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What this work says

Outgoing claims: the papers this work cites, builds on, or argues with.

inferredcites →https://doi.org/10.1016/j.cell.2009.07.001openalex-snapshot
Stressing Out over tRNA Cleavage
inferredcites →https://doi.org/10.1016/j.molcel.2011.06.022openalex-snapshot
Angiogenin-Induced tRNA Fragments Inhibit Translation Initiation
inferredcites →https://doi.org/10.1016/j.tcb.2011.12.001openalex-snapshot
Secreted microRNAs: a new form of intercellular communication
inferredcites →https://doi.org/10.1038/cr.2012.141openalex-snapshot
A novel class of tRNA-derived small RNAs extremely enriched in mature mouse sperm
inferredcites →https://doi.org/10.1038/mt.2012.237openalex-snapshot
Identification and Functional Characterization of tRNA-derived RNA Fragments (tRFs) in Respiratory Syncytial Virus Infection
inferredcites →https://doi.org/10.1038/nrclinonc.2011.76openalex-snapshot
MicroRNAs in body fluids—the mix of hormones and biomarkers
inferredcites →https://doi.org/10.1038/nsmb.2357openalex-snapshot
RNA cytosine methylation by Dnmt2 and NSun2 promotes tRNA stability and protein synthesis
inferredcites →https://doi.org/10.1073/pnas.1019055108openalex-snapshot
Argonaute2 complexes carry a population of circulating microRNAs independent of vesicles in human plasma
inferredcites →https://doi.org/10.1093/nar/gks658openalex-snapshot
Deep sequencing of RNA from immune cell-derived vesicles uncovers the selective incorporation of small non-coding RNA biotypes with potential regulatory functions
inferredcites →https://doi.org/10.1186/1471-2164-14-298openalex-snapshot
5′ tRNA halves are present as abundant complexes in serum, concentrated in blood cells, and modulated by aging and calorie restriction

What points at this work

Incoming claims: where this work appears in other papers’ reference lists and arguments.

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Post‐ harvest consideration factors for microRNA research in cellular, tissue, serum and plasma samples
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Serum tsRNA as a novel molecular diagnostic biomarker for lupus nephritis
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Relationship between tRNA ‐derived fragments and human cancers
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Extracellular RNA in viral–host interactions: Thinking outside the cell
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Non-coding RNA Networks in Infection
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Small Noncoding RNAs in Senescence and Aging
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tRNA-derived fragments (tRFs): establishing their turf in post-transcriptional gene regulation
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tRNA-Derived Small RNAs: Novel Insights into the Pathogenesis and Treatment of Cardiovascular Diseases
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Non-coding RNA Networks in Infection
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Small non-coding RNAs as epigenetic regulators
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Exosomal RNA in renal diseases
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TRMT1L-catalyzed m22G27 on tyrosine tRNA is required for efficient mRNA translation and cell survival under oxidative stress
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Serum exosome smallRNA array analysis identifies 5’tiRNA-PheGAA and tRF-1-IleAAT as potential biomarkers for diagnosis of rheumatoid arthritis
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Landscape of extracellular small RNA and identification of biomarkers in multiple human cancers
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OM-sqPCR enables one-step multiplex quantification of circulating small-RNA subclasses for colorectal cancer classification
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tsRNA modifications: An emerging layer of biological regulation in disease
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Elucidation of physico-chemical principles of high-density lipoprotein–small RNA binding interactions
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tRNA renovatio: Rebirth through fragmentation
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Small RNA Modifications: Integral to Function and Disease
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5′-tiRNA-Cys-GCA regulates VSMC proliferation and phenotypic transition by targeting STAT4 in aortic dissection
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Comprehensive landscape of tRNA-derived fragments in lung cancer
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The function and therapeutic potential of transfer RNA-derived small RNAs in cardiovascular diseases: A review
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In Situ imaging of cell surface RNAs during inflammation in zebrafish models using near-infrared fluorescent DNA probe
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Small RNA and Toll-like receptor interactions: origins and disease mechanisms
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Transfer RNA-Derived Small RNAs: Another Layer of Gene Regulation and Novel Targets for Disease Therapeutics
inferred← citeshttps://doi.org/10.1038/cr.2017.109openalex-snapshot
tsRNAs: new players in mammalian retrotransposon control
inferred← citeshttps://doi.org/10.1038/nrg.2016.106openalex-snapshot
Epigenetic inheritance of acquired traits through sperm RNAs and sperm RNA modifications
inferred← citeshttps://doi.org/10.1038/nrg3861openalex-snapshot
Emerging roles of tRNA in adaptive translation, signalling dynamics and disease
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The emerging complexity of the tRNA world: mammalian tRNAs beyond protein synthesis
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Transgenerational epigenetic influences of paternal environmental exposures on brain function and predisposition to psychiatric disorders
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Angiogenin-mediated tsRNAs control inflammation and metabolic disorder by regulating NLRP3 inflammasome
inferred← citeshttps://doi.org/10.1038/s41467-021-26909-1openalex-snapshot
Angiogenin mediates paternal inflammation-induced metabolic disorders in offspring through sperm tsRNAs
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Maternal diet-induced alterations in uterine fluid sncRNAs compromise preimplantation embryo development and offspring metabolic health
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Exploring the expanding universe of small RNAs
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Roles and regulation of tRNA-derived small RNAs in animals
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Optimized identification and characterization of small RNAs with PANDORA-seq
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Altered levels of angiogenin and tRNA-derived fragments associate with severe asthma
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Sperm RNA-mediated epigenetic inheritance in mammals: challenges and opportunities
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Differential expression of human tRNA genes drives the abundance of tRNA-derived fragments
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Nicked tRNAs are stable reservoirs of tRNA halves in cells and biofluids
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The tRNA Val half: A strong endogenous Toll-like receptor 7 ligand with a 5′-terminal universal sequence signature
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The diagnostic and prognostic value of tsRNAs in gastric cancers: a systematic review and meta-analysis
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tRNA-derived fragments and microRNAs in the maternal-fetal interface of a mouse maternal-immune-activation autism model
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Extracellular tRNAs and tRNA-derived fragments
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Novel insights into the roles of tRNA-derived small RNAs
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A sequence of 28S rRNA-derived small RNAs is enriched in mature sperm and various somatic tissues and possibly associates with inflammation
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Processing by RNase 1 forms tRNA halves and distinct Y RNA fragments in the extracellular environment
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Fragmentation of extracellular ribosomes and tRNAs shapes the extracellular RNAome
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Experimental paradigms revisited: oxidative stress-induced tRNA fragmentation does not correlate with stress granule formation but is associated with delayed cell death
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Identification of two novel functional tRNA-derived fragments induced in response to respiratory syncytial virus infection
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Circulating micro RNA signature of genotype‐by‐age interactions in the long‐lived A mes dwarf mouse
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Epididymal small non‐coding RNA studies: progress over the past decade
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tiRNA‐Gly‐GCC‐001 in major depressive disorder: Promising diagnostic and therapeutic biomarker
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Plasma tsRNA Signatures Serve as a Novel Biomarker for Bladder Cancer
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Plasma‐Derived Exosomal i‐tRF‐LeuCAA as Biomarker for Glioma Diagnosis and Promoter of Epithelial‐Mesenchymal Transition via TPM4 Regulation
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tsRNAs: Novel small molecules from cell function and regulatory mechanism to therapeutic targets
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Expression profiles and potential roles of transfer RNA‐derived small RNAs in atherosclerosis
inferred← citeshttps://doi.org/10.1126/science.aad7977openalex-snapshot
Sperm tsRNAs contribute to intergenerational inheritance of an acquired metabolic disorder
inferred← citeshttps://doi.org/10.1146/annurev-genom-101722-101224openalex-snapshot
RNA Crossing Membranes: Systems and Mechanisms Contextualizing Extracellular RNA and Cell Surface GlycoRNAs
inferred← citeshttps://doi.org/10.1155/2021/6696894openalex-snapshot
Exosome-Derived Noncoding RNAs as a Promising Treatment of Bone Regeneration
inferred← citeshttps://doi.org/10.1155/2022/8799319openalex-snapshot
Study of tRNA-Derived Fragment tRF-20-S998LO9D in Pan-Cancer
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tRNA-Derived Small RNAs: A Novel Regulatory Small Noncoding RNA in Renal Diseases
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Data Mining of Small RNA-Seq Suggests an Association Between Prostate Cancer and Altered Abundance of 5′ Transfer RNA Halves in Seminal Fluid and Prostatic Tissues
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Association of Circulating Transfer RNA fragments with antibody response to Mycoplasma bovis in beef cattle
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A novel class of tsRNA signatures as biomarkers for diagnosis and prognosis of pancreatic cancer
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tRNA methylation: functional insights and epitranscriptomic regulation
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Small and long RNA transcriptome of whole human cerebrospinal fluid and serum as compared to their extracellular vesicle fractions reveal profound differences in expression patterns and impacts on biological processes
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Sperm-borne small non-coding RNAs: potential functions and mechanisms as epigenetic carriers
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Human small non-coding tRNA-derived fragments as key hallmarks of host-virus interaction in viral infections
inferred← citeshttps://doi.org/10.1186/s41544-019-0036-7openalex-snapshot
Emerging role of a novel small non-coding regulatory RNA: tRNA-derived small RNA
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The Therapeutic Potential of tRNA-derived Small RNAs in Neurodegenerative Disorders
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Transfer RNA-derived small RNAs: potential applications as novel biomarkers for disease diagnosis and prognosis
inferred← citeshttps://doi.org/10.21037/tlcr-21-829openalex-snapshot
tsRNA-5001a promotes proliferation of lung adenocarcinoma cells and is associated with postoperative recurrence in lung adenocarcinoma patients
inferred← citeshttps://doi.org/10.2147/dmso.s379473openalex-snapshot
Identification of a tsRNA Contributor to Impaired Diabetic Wound Healing via High Glucose-Induced Endothelial Dysfunction
inferred← citeshttps://doi.org/10.3389/fbioe.2023.1169424openalex-snapshot
CRISPR-Cas and catalytic hairpin assembly technology for target-initiated amplification detection of pancreatic cancer specific tsRNAs
inferred← citeshttps://doi.org/10.3389/fcell.2025.1698265openalex-snapshot
Emerging roles and therapeutic potential of tRNA-Derived small RNAs in reproductive system diseases: a review
inferred← citeshttps://doi.org/10.3389/fcvm.2021.716716openalex-snapshot
Altered Expression of Transfer-RNA-Derived Small RNAs in Human With Rheumatic Heart Disease
inferred← citeshttps://doi.org/10.3389/fcvm.2023.1030635openalex-snapshot
Inhibition of tiRNA-Gly-GCC ameliorates neointimal formation via CBX3-mediated VSMCs phenotypic switching
inferred← citeshttps://doi.org/10.3389/fendo.2022.1049251openalex-snapshot
Differentially expressed tRNA-derived fragments and their roles in primary cardiomyocytes stimulated by high glucose
inferred← citeshttps://doi.org/10.3389/fgene.2015.00271openalex-snapshot
Characterization of circulating transfer RNA-derived RNA fragments in cattle
inferred← citeshttps://doi.org/10.3389/fimmu.2015.00074openalex-snapshot
5′ tRNA Halves: The Next Generation of Immune Signaling Molecules
inferred← citeshttps://doi.org/10.3389/fimmu.2021.735105openalex-snapshot
A Novel Serum tsRNA for Diagnosis and Prediction of Nephritis in SLE
inferred← citeshttps://doi.org/10.3389/fmolb.2021.662620openalex-snapshot
Toward an Understanding of Extracellular tRNA Biology
inferred← citeshttps://doi.org/10.3389/fnmol.2019.00326openalex-snapshot
Differential Expression Profiles and Functional Prediction of tRNA-Derived Small RNAs in Rats After Traumatic Spinal Cord Injury
inferred← citeshttps://doi.org/10.3389/fphar.2021.794986openalex-snapshot
Riddle of the Sphinx: Emerging Role of Transfer RNAs in Human Cancer
inferred← citeshttps://doi.org/10.3389/fvets.2024.1463431openalex-snapshot
Transfer RNA-derived fragment production in calves challenged with Mycoplasma bovis or co-infected with bovine viral diarrhea virus and Mycoplasma bovis in several tissues and blood
inferred← citeshttps://doi.org/10.3390/biom14101340openalex-snapshot
tRNA and tsRNA: From Heterogeneity to Multifaceted Regulators
inferred← citeshttps://doi.org/10.3390/biom15101393openalex-snapshot
The Life of MicroRNAs: Biogenesis, Function and Decay in Cancer
inferred← citeshttps://doi.org/10.3390/cancers12102773openalex-snapshot
tRNA-Derived Small RNAs: Novel Epigenetic Regulators
inferred← citeshttps://doi.org/10.3390/diagnostics13122065openalex-snapshot
Global Profile of tRNA-Derived Small RNAs in Pathological Cardiac Hypertrophy Plasma and Identification of tRF-21-NB8PLML3E as a New Hypertrophy Marker
inferred← citeshttps://doi.org/10.3390/genes9050246openalex-snapshot
tRNA-Derived Small RNA: A Novel Regulatory Small Non-Coding RNA
inferred← citeshttps://doi.org/10.3390/genes9120607openalex-snapshot
tRNA-Derived Small RNAs: Biogenesis, Modification, Function and Potential Impact on Human Disease Development
inferred← citeshttps://doi.org/10.3390/ijms19020518openalex-snapshot
Fine-Tuning of Gene Expression by tRNA-Derived Fragments during Abiotic Stress Signal Transduction
inferred← citeshttps://doi.org/10.3390/ijms27041949openalex-snapshot
High-Throughput Sequencing Decodes tsRNA Landscapes: Insights into Cancer Biomarkers and Therapeutic Targets
inferred← citeshttps://doi.org/10.3410/f.735517536.793560083openalex-snapshot
Faculty Opinions recommendation of Differential expression of human tRNA genes drives the abundance of tRNA-derived fragments.
inferred← citeshttps://doi.org/10.4103/1673-5374.265560openalex-snapshot
Pathological significance of tRNA-derived small RNAs in neurological disorders
inferred← citeshttps://doi.org/10.5483/bmbrep.2022-0199openalex-snapshot
The role of tRNA-derived small RNAs in aging
inferred← citeshttps://doi.org/10.5772/intechopen.72987openalex-snapshot
Viral Modulation of Host Translation and Implications for Vaccine Development
inferred← citeshttps://doi.org/10.6084/m9.figshare.21069612openalex-snapshot
Additional file 1 of Small and long RNA transcriptome of whole human cerebrospinal fluid and serum as compared to their extracellular vesicle fractions reveal profound differences in expression patterns and impacts on biological processes
inferred← citeshttps://doi.org/10.70675/c4e031efz0a8bz4cfaz93abza990eb954d53openalex-snapshot
Comprendre le rôle des complexes de modification de l’ARNt ADAT3/ADAT2 & WDR4/METTL1 pendant le développement du cortex cérébral
inferred← citeshttps://doi.org/10.7150/thno.80054openalex-snapshot
Human circulating small non-coding RNA signature as a non-invasive biomarker in clinical diagnosis of acute myeloid leukaemia
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