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Reconciling Gene and Genome Duplication Events: Using Multiple Nuclear Gene Families to Infer the Phylogeny of the Aquatic Plant Family Pontederiaceae
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What this work says
Outgoing claims: the papers this work cites, builds on, or argues with.
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Chloroplast DNA Systematics: A Review of Methods and Data Analysis
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Towards a phylogenetic nomenclature of Tracheophyta
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From Gene to Organismal Phylogeny: Reconciled Trees and the Gene Tree/Species Tree Problem
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Inferring Species Trees from Gene Trees: A Phylogenetic Analysis of the Elapidae (Serpentes) Based on the Amino Acid Sequences of Venom Proteins
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Ebb and flow of the chloroplast inverted repeat
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Phylogenetic utility of 141 low-copy nuclear regions in taxa at different taxonomic levels in two distantly related families of rosids
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Characterization of the adenosine deaminase-related growth factor (ADGF) gene family in Drosophila
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Arthropod relationships revealed by phylogenomic analysis of nuclear protein-coding sequences
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Phylogenetic Congruence and Discordance Among One Morphological and Three Molecular Data Sets from Pontederiaceae
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Microstructural Changes in Noncoding Chloroplast DNA: Interpretation, Evolution, and Utility of Indels and Inversions in Basal Angiosperm Phylogenetic Inference
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GeneTree: comparing gene and species phylogenies using reconciled trees.
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Blast2GO: a universal tool for annotation, visualization and analysis in functional genomics research
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DupTree: a program for large-scale phylogenetic analyses using gene tree parsimony
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Deep Genomic-Scale Analyses of the Metazoa Reject Coelomata: Evidence from Single- and Multigene Families Analyzed Under a Supertree and Supermatrix Paradigm
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MUSCLE: multiple sequence alignment with high accuracy and high throughput
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High-throughput functional annotation and data mining with the Blast2GO suite
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Rooting Phylogenetic Trees with Distant Outgroups: A Case Study from the Commelinoid Monocots
inferredcites →https://doi.org/10.1093/sysbio/28.2.132openalex-snapshot
Fitting the Gene Lineage into its Species Lineage, a Parsimony Strategy Illustrated by Cladograms Constructed from Globin Sequences
inferredcites →https://doi.org/10.1093/sysbio/syp030openalex-snapshot
Hybrid Origins and Homoploid Reticulate Evolution within Heliosperma (Sileneae, Caryophyllaceae)—A Multigene Phylogenetic Approach with Relative Dating
inferredcites →https://doi.org/10.1093/sysbio/syp083openalex-snapshot
Probabilistic Models of Chromosome Number Evolution and the Inference of Polyploidy
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Going nuclear: gene family evolution and vertebrate phylogeny reconciled
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An update of the Angiosperm Phylogeny Group classification for the orders and families of flowering plants: APG IV
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An update of the Angiosperm Phylogeny Group classification for the orders and families of flowering plants: APG III
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RECONSTRUCTION OF THE EVOLUTION OF REPRODUCTIVE CHARACTERS IN PONTEDERIACEAE USING PHYLOGENETIC EVIDENCE FROM CHLOROPLAST DNA RESTRICTION‐SITE VARIATION
inferredcites →https://doi.org/10.1126/science.286.5441.947openalex-snapshot
The Root of Angiosperm Phylogeny Inferred from Duplicate Phytochrome Genes
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Phylogenetic relationships in the monocot order Commelinales, with a focus on PhilydraceaeThis paper is one of a selection of papers published in the Special Issue on Systematics Research.
inferredcites →https://doi.org/10.1186/1471-2148-10-216openalex-snapshot
Ontogenetic convergence and evolution of foot morphology in European cave salamanders (Family: Plethodontidae)
inferredcites →https://doi.org/10.1186/1471-2148-10-61openalex-snapshot
Identification of shared single copy nuclear genes in Arabidopsis, Populus, Vitis and Oryzaand their phylogenetic utility across various taxonomic levels
inferredcites →https://doi.org/10.1186/1471-2148-7-s1-s3openalex-snapshot
Inferring angiosperm phylogeny from EST data with widespread gene duplication
inferredcites →https://doi.org/10.1534/genetics.109.110130openalex-snapshot
Mating-System Variation, Demographic History and Patterns of Nucleotide Diversity in the Tristylous Plant Eichhornia paniculata
inferredcites →https://doi.org/10.1663/0013-0001(2005)059[0398:dfabre]2.0.co;2openalex-snapshot
Flowering Plants of the Neotropics
inferredcites →https://doi.org/10.21135/893275471.027openalex-snapshot
Pontederiaceae, the Waterhyacinth Family
inferredcites →https://doi.org/10.2307/2399363openalex-snapshot
Evolution of Breeding Systems in Eichhornia (Pontederiaceae): A Review
inferredcites →https://doi.org/10.2307/2409372openalex-snapshot
OXFORD SURVEYS IN EVOLUTIONARY BIOLOGY
inferredcites →https://doi.org/10.2307/2410883openalex-snapshot
Reconstruction of the Evolution of Reproductive Characters in Pontederiaceae Using Phylogenetic Evidence from Chloroplast DNA Restriction-Site Variation
inferredcites →https://doi.org/10.2307/2412519openalex-snapshot
Fitting the Gene Lineage into its Species Lineage, a Parsimony Strategy Illustrated by Cladograms Constructed from Globin Sequences
inferredcites →https://doi.org/10.2307/2419070openalex-snapshot
Gene Trees and Species Trees: Molecular Systematics as One-Character Taxonomy
inferredcites →https://doi.org/10.2307/2419074openalex-snapshot
Phylogenetic Systematics of Pontederiaceae
inferredcites →https://doi.org/10.2307/2419593openalex-snapshot
Molecular Evolution and Adaptive Radiation.
inferredcites →https://doi.org/10.2307/25065865openalex-snapshot
In defence of a conifer taxonomy which recognises evolution
inferredcites →https://doi.org/10.2307/2656749openalex-snapshot
Utility of 17 chloroplast genes for inferring the phylogeny of the basal angiosperms
inferredcites →https://doi.org/10.2307/2807789openalex-snapshot
Monocotyledons: Systematics and Evolution.
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The evolution of nuclear genome structure in seed plants
What points at this work
Incoming claims: where this work appears in other papers’ reference lists and arguments.
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Two new species of Pontederia L. (Pontederiaceae Kunth) to South America
inferred← citeshttps://doi.org/10.1002/ajb2.1698openalex-snapshot
A comprehensive phylogenomic study of the monocot order Commelinales, with a new classification of Commelinaceae
inferred← citeshttps://doi.org/10.1016/j.aquabot.2015.11.003openalex-snapshot
Morphological and anatomical patterns in Pontederiaceae (Commelinales) and their evolutionary implications
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Evolution of the merozoite surface protein 7 ( msp7 ) family in Plasmodium vivax and P . falciparum : A comparative approach
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Transcriptome and complete chloroplast genome of Glycyrrhiza inflata and comparative analyses with the other two licorice species
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Impact of gene family evolutionary histories on phylogenetic species tree inference by gene tree parsimony
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Evolutionary history of chloridoid grasses estimated from 122 nuclear loci
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Megamelus scutellaris(Hemiptera: Delphacidae), a biocontrol agent of water hyacinth, is not sufficiently specific for release in Australia
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Making next-generation sequencing work for you: approaches and practical considerations for marker development and phylogenetics
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Ab Initio Construction and Evolutionary Analysis of Protein-Coding Gene Families with Partially Homologous Relationships: Closely Related Drosophila Genomes as a Case Study
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The Evolution of Haploid Chromosome Numbers in the Sunflower Family
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The Genomic Basis of the Tristylous Floral Polymorphism: Evidence for a Role of Gene Duplications in a Region of Restricted Recombination
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Extensive and Continuous Duplication Facilitates Rapid Evolution and Diversification of Gene Families
inferred← citeshttps://doi.org/10.1093/sysbio/sys076openalex-snapshot
TreeFix: Statistically Informed Gene Tree Error Correction Using Species Trees
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When Outgroups Fail; Phylogenomics of Rooting the Emerging Pathogen, Coxiella burnetii
inferred← citeshttps://doi.org/10.1093/sysbio/syu128openalex-snapshot
Assessing Approaches for Inferring Species Trees from Multi-Copy Genes
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Algorithms for Genome-Scale Phylogenetics Using Gene Tree Parsimony
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Highly conserved low‐copy nuclear genes as effective markers for phylogenetic analyses in angiosperms
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Mitochondrial genes from 18 angiosperms fill sampling gaps for phylogenomic inferences of the early diversification of flowering plants
inferred← citeshttps://doi.org/10.1111/jse.12744openalex-snapshot
Plastid phylogenomics and biogeography of the genus Monochoria (Pontederiaceae)
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Genetic variation and clonal diversity in floating aquatic plants: Comparative genomic analysis of water hyacinth species in their native range
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Two new synonyms in Heteranthera (Pontederiaceae, Commelinales)
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Genomic consequences of transitions from cross- to self-fertilization on the efficacy of selection in three independently derived selfing plants
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Infrageneric Phylogeny and Temporal Divergence of Sorghum (Andropogoneae, Poaceae) Based on Low-Copy Nuclear and Plastid Sequences
inferred← citeshttps://doi.org/10.1590/2175-7860201566318openalex-snapshot
Notes on the Pontederiaceae names described in Vellozo'sFlora fluminensis
inferred← citeshttps://doi.org/10.1590/2175-7860201667548openalex-snapshot
Flora das cangas da Serra dos Carajás, Pará, Brasil: Pontederiaceae
inferred← citeshttps://doi.org/10.1590/2175-7860201869412openalex-snapshot
Flora do Ceará: Pontederiaceae
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The Evolution of Colchicaceae, with a Focus on Chromosome Numbers
inferred← citeshttps://doi.org/10.1600/036364418x697238openalex-snapshot
Heteranthera longirachilla (Pontederiaceae), a Misinterpreted New Species of the H. reniformis Complex
inferred← citeshttps://doi.org/10.2139/ssrn.6950559openalex-snapshot
Species delimitation and cryptic diversity in Monochoria (Pontederiaceae: Commelinales), with the description of a new species
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Algorithms for constructing more accurate and inclusive phylogenetic trees
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A Target Capture-Based Method to Estimate Ploidy From Herbarium Specimens
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Total evidence phylogeny of Pontederiaceae (Commelinales) sheds light on the necessity of its recircumscription and synopsis of Pontederia L.
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Two peculiar new species of Heteranthera Ruiz & Pavón (Pontederiaceae) from Brazil, with notes on inflorescence architecture in the family
inferred← citeshttps://doi.org/10.3897/phytokeys.89.20388openalex-snapshot
Morphological phylogeny of Tradescantia L. (Commelinaceae) sheds light on a new infrageneric classification for the genus and novelties on the systematics of subtribe Tradescantiinae
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