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MEGA Evolutionary Software Re-Engineered to Handle Today’s Big Data Demands

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Outgoing claims: the papers this work cites, builds on, or argues with.

inferredcites →https://doi.org/10.1093/molbev/msw050openalex-snapshot
Evolutionary Metabolomics Reveals Domestication-Associated Changes in Tetraploid Wheat Kernels
inferredcites →https://doi.org/10.1093/molbev/msw054openalex-snapshot
MEGA7: Molecular Evolutionary Genetics Analysis Version 7.0 for Bigger Datasets

What points at this work

Incoming claims: where this work appears in other papers’ reference lists and arguments.

inferred← citeshttps://doi.org/10.3897/imafungus.16.140572zenodo-depositor-declared
The six whole mitochondrial genomes for the Diaporthe species: features, evolution and phylogeny
inferred← citeshttps://doi.org/10.3897/imafungus.17.203360zenodo-depositor-declared
Mitochondrial genomic variation, evolutionary dynamics, and phylogeny of forest-associated Phytophthora species in the Qinling Mountains of China
inferred← citeshttps://doi.org/10.1002/ece3.70901openalex-snapshot
Phylogenetic Relationships of Three Ramaria Species Based on Mitochondrial Genome Analysis
inferred← citeshttps://doi.org/10.1002/ece3.8818openalex-snapshot
Comparative analysis of the complete mitochondrial genomes of four cordyceps fungi
inferred← citeshttps://doi.org/10.1007/s10658-022-02588-6openalex-snapshot
The draft genome sequence and characterization of Exserohilum rostratum, a new causal agent of maize leaf spot disease in Chinese Mainland
inferred← citeshttps://doi.org/10.1007/s13595-016-0600-3openalex-snapshot
Budburst phenology and host use by Operophtera brumata (Linnaeus, 1758) (Lepidoptera: Geometridae) in three Mediterranean oak species
inferred← citeshttps://doi.org/10.1007/s40203-017-0025-1openalex-snapshot
Molecular characterization, modeling, in silico analysis of equine pituitary gonadotropin alpha subunit and docking interaction studies with ganirelix
inferred← citeshttps://doi.org/10.1016/j.csbj.2020.12.041openalex-snapshot
The mitogenomes of two saprophytic Boletales species ( Coniophora ) reveals intron dynamics and accumulation of plasmid-derived and non-conserved genes
inferred← citeshttps://doi.org/10.1016/j.csbj.2022.03.016openalex-snapshot
Comparative mitochondrial genome analyses reveal conserved gene arrangement but massive expansion/contraction in two closely related Exserohilum pathogens
inferred← citeshttps://doi.org/10.1016/j.ijbiomac.2018.06.129openalex-snapshot
Characterization of the mitochondrial genomes of three species in the ectomycorrhizal genus Cantharellus and phylogeny of Agaricomycetes
inferred← citeshttps://doi.org/10.1016/j.ijbiomac.2018.10.037openalex-snapshot
Characterization and comparison of the mitochondrial genomes from two Lyophyllum fungal species and insights into phylogeny of Agaricomycetes
inferred← citeshttps://doi.org/10.1016/j.ijbiomac.2019.08.003openalex-snapshot
The complete mitochondrial genomes of five important medicinal Ganoderma species: Features, evolution, and phylogeny
inferred← citeshttps://doi.org/10.1016/j.ijbiomac.2019.09.188openalex-snapshot
The complete mitochondrial genomes of two model ectomycorrhizal fungi (Laccaria): features, intron dynamics and phylogenetic implications
inferred← citeshttps://doi.org/10.1016/j.ijbiomac.2020.06.142openalex-snapshot
The 206 kbp mitochondrial genome of Phanerochaete carnosa reveals dynamics of introns, accumulation of repeat sequences and plasmid-derived genes
inferred← citeshttps://doi.org/10.1016/j.ijbiomac.2021.01.087openalex-snapshot
The first eleven mitochondrial genomes from the ectomycorrhizal fungal genus (Boletus) reveal intron loss and gene rearrangement
inferred← citeshttps://doi.org/10.1016/j.jbiosc.2022.07.003openalex-snapshot
Intraspecific comparison of mitochondrial genomes reveals the evolution in medicinal fungus Ganoderma lingzhi
inferred← citeshttps://doi.org/10.1016/j.scienta.2026.114733openalex-snapshot
Development of KASP markers, SNP fingerprinting and population genetic analysis of Auricularia cornea
inferred← citeshttps://doi.org/10.1038/s41598-017-03323-6openalex-snapshot
Conformational plasticity and evolutionary analysis of the myotilin tandem Ig domains
inferred← citeshttps://doi.org/10.1038/s41598-020-73461-xopenalex-snapshot
The complete mitochondrial genome of medicinal fungus Taiwanofungus camphoratus reveals gene rearrangements and intron dynamics of Polyporales
inferred← citeshttps://doi.org/10.1038/s41598-021-82040-7openalex-snapshot
Comparative mitochondrial genome analysis reveals intron dynamics and gene rearrangements in two Trametes species
inferred← citeshttps://doi.org/10.1080/23802359.2024.2324938openalex-snapshot
The second complete mitochondrial genome of Capillidium rhysosporum within the family Capillidiaceae, Entomophthorales
inferred← citeshttps://doi.org/10.1093/jac/dkad386openalex-snapshot
A detailed characterization of drug resistance during darunavir/ritonavir monotherapy highlights a high barrier to the emergence of resistance mutations in protease but identifies alternative pathways of resistance
inferred← citeshttps://doi.org/10.1093/ve/vew031openalex-snapshot
Impacts and shortcomings of genetic clustering methods for infectious disease outbreaks
inferred← citeshttps://doi.org/10.1101/2023.10.15.562382openalex-snapshot
A detailed characterisation of drug resistance during darunavir/ritonavir (DRV/r) monotherapy highlights a high barrier to the emergence of resistance mutations in protease but identifies alternative pathways of resistance
inferred← citeshttps://doi.org/10.1128/mbio.02545-18openalex-snapshot
Trophic Specialization Results in Genomic Reduction in Free-Living Marine Idiomarina Bacteria
inferred← citeshttps://doi.org/10.1186/s12864-025-11911-4openalex-snapshot
Comparative analysis of mitochondrial genomes in lycoperdaceae fungi reveals intron dynamics and phylogenetic relationships
inferred← citeshttps://doi.org/10.1186/s12870-023-04063-8openalex-snapshot
Genome-wide identification and characterisation of bHLH transcription factors in Artemisia annua
inferred← citeshttps://doi.org/10.1186/s43008-020-00038-8openalex-snapshot
Comparative mitogenome analysis of two ectomycorrhizal fungi (Paxillus) reveals gene rearrangement, intron dynamics, and phylogeny of basidiomycetes
inferred← citeshttps://doi.org/10.1186/s43008-020-00047-7openalex-snapshot
The 256 kb mitochondrial genome of Clavaria fumosa is the largest among phylum Basidiomycota and is rich in introns and intronic ORFs
inferred← citeshttps://doi.org/10.1186/s43008-022-00094-2openalex-snapshot
First two mitochondrial genomes for the order Filobasidiales reveal novel gene rearrangements and intron dynamics of Tremellomycetes
inferred← citeshttps://doi.org/10.1186/s43008-022-00100-7openalex-snapshot
The first two mitochondrial genomes for the genus Ramaria reveal mitochondrial genome evolution of Ramaria and phylogeny of Basidiomycota
inferred← citeshttps://doi.org/10.1186/s43008-023-00112-xopenalex-snapshot
The first two mitochondrial genomes from Apiotrichum reveal mitochondrial evolution and different taxonomic assignment of Trichosporonales
inferred← citeshttps://doi.org/10.1186/s43008-024-00149-6openalex-snapshot
The complete mitochondrial genomes of five critical phytopathogenic Bipolaris species: features, evolution, and phylogeny
inferred← citeshttps://doi.org/10.1371/journal.pone.0208789openalex-snapshot
Polymorphism analysis of the apxIA gene of Actinobacillus pleuropneumoniae serovar 5 isolated in swine herds from Brazil
inferred← citeshttps://doi.org/10.3168/jds.2017-13658openalex-snapshot
Short communication: Extended-spectrum AmpC–producing Escherichia coli from milk and feces in dairy farms in Brazil
inferred← citeshttps://doi.org/10.3389/fgene.2021.534871openalex-snapshot
Comparative Mitogenomic Analysis Reveals Dynamics of Intron Within and Between Tricholoma Species and Phylogeny of Basidiomycota
inferred← citeshttps://doi.org/10.3389/fmicb.2020.01382openalex-snapshot
Comparative Mitogenome Analysis Reveals Mitochondrial Genome Differentiation in Ectomycorrhizal and Asymbiotic Amanita Species
inferred← citeshttps://doi.org/10.3389/fmicb.2020.573064openalex-snapshot
Mitogenomes of Two Phallus Mushroom Species Reveal Gene Rearrangement, Intron Dynamics, and Basidiomycete Phylogeny
inferred← citeshttps://doi.org/10.3389/fmicb.2021.583129openalex-snapshot
Evolutionary Insights Into Two Widespread Ectomycorrhizal Fungi (Pisolithus) From Comparative Analysis of Mitochondrial Genomes
inferred← citeshttps://doi.org/10.3389/fmicb.2021.646567openalex-snapshot
Characterization of the Complete Mitochondrial Genome of Basidiomycete Yeast Hannaella oryzae: Intron Evolution, Gene Rearrangement, and Its Phylogeny
inferred← citeshttps://doi.org/10.3389/fmicb.2025.1605218openalex-snapshot
Mitochondrial genome characterization, evolution and intron dynamics of the entomopathogenic genus Cordyceps
inferred← citeshttps://doi.org/10.3389/fpls.2025.1532782openalex-snapshot
Characterization of Ganoderma pseudoferreum mitogenome revealed a remarkable evolution in genome size and composition of protein-coding genes
inferred← citeshttps://doi.org/10.3389/fpubh.2022.1028026openalex-snapshot
Genome-wide SNPs reveal novel patterns of spatial genetic structure in Aedes albopictus (Diptera Culicidae) population in China
inferred← citeshttps://doi.org/10.3390/genes13050854openalex-snapshot
Genetic Differentiation and Widespread Mitochondrial Heteroplasmy among Geographic Populations of the Gourmet Mushroom Thelephora ganbajun from Yunnan, China
inferred← citeshttps://doi.org/10.3390/ijms20205167openalex-snapshot
Comparative Mitochondrial Genome Analysis of Two Ectomycorrhizal Fungi (Rhizopogon) Reveals Dynamic Changes of Intron and Phylogenetic Relationships of the Subphylum Agaricomycotina
inferred← citeshttps://doi.org/10.3390/jof8080781openalex-snapshot
Comparative Mitogenomic Analysis Reveals Intraspecific, Interspecific Variations and Genetic Diversity of Medical Fungus Ganoderma
inferred← citeshttps://doi.org/10.3390/microorganisms12102053openalex-snapshot
Comparative Mitogenomics Analysis Revealed Evolutionary Divergence among Purpureocillium Species and Gene Arrangement and Intron Dynamics of Ophiocordycipitaceae
inferred← citeshttps://doi.org/10.3958/059.046.0417openalex-snapshot
First Record of Invasive Pest Blueberry Gall Midge, Dasineura oxycoccana (Johnson)1 in Mexico: Molecular and Morphological Confirmation
inferred← citeshttps://doi.org/10.47749/t/unicamp.2020.1266060openalex-snapshot
Bases moleculares da degradação e do metabolismo de N-glicanos pela bactéria probiótica "Bifidobacterium longum"
inferred← citeshttps://doi.org/10.5897/ajmr2019.9134openalex-snapshot
Detection of mutations in ampC promoter/attenuator gene in Escherichia coli from dairy cows in Rio de Janeiro and Mato Grosso, Brazil
inferred← citeshttps://doi.org/10.6084/m9.figshare.22616861openalex-snapshot
Additional file 1 of Genome-wide identification and characterisation of bHLH transcription factors in Artemisia annua
inferred← citeshttps://doi.org/10.6084/m9.figshare.22616864openalex-snapshot
Additional file 2 of Genome-wide identification and characterisation of bHLH transcription factors in Artemisia annua
inferred← citeshttps://doi.org/10.6084/m9.figshare.22616867openalex-snapshot
Additional file 3 of Genome-wide identification and characterisation of bHLH transcription factors in Artemisia annua
inferred← citeshttps://doi.org/10.6084/m9.figshare.22616870openalex-snapshot
Additional file 4 of Genome-wide identification and characterisation of bHLH transcription factors in Artemisia annua
inferred← citeshttps://doi.org/10.65390/fdiv.2026.136011openalex-snapshot
Integrating Mitochondrial Genomics into the Taxonomy of Hypoxylaceae
inferred← citeshttps://doi.org/10.70675/96df645fzd9e8z45d4z9735z7bfe13422443openalex-snapshot
Caractérisation et épidémiologie moléculaire du complexe Mycobacterium abscessus en France et au Vietnam
inferred← citeshttps://doi.org/10.7717/peerj.6634openalex-snapshot
Molecular evolution of the VacA p55 binding domain ofHelicobacter pyloriin mestizos from a high gastric cancer region of Colombia
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