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Extensive cryptic diversity of giant clams (Cardiidae: Tridacninae) revealed by DNA-sequence-based species delimitation approaches with new data from Hainan Island, South China Sea

https://doi.org/10.1093/mollus/eyz033
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What this work says

Outgoing claims: the papers this work cites, builds on, or argues with.

inferredcites →https://doi.org/10.1002/aqc.888openalex-snapshot
Can giant clam (Tridacna squamosa) populations be restored on Singapore's heavily impacted coral reefs?
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Phylogeny of Giant Clams (Cardiidae: Tridacninae) Based on Partial Mitochondrial 16S rDNA Gene Sequences
inferredcites →https://doi.org/10.1007/bf00347276openalex-snapshot
Genetic structure of giant clam (Tridacna derasa) populations from reefs in the Indo-Pacific
inferredcites →https://doi.org/10.1007/s00338-009-0483-yopenalex-snapshot
Highly restricted gene flow and deep evolutionary lineages in the giant clam Tridacna maxima
inferredcites →https://doi.org/10.1007/s00338-018-1679-9openalex-snapshot
Accurate population genetic measurements require cryptic species identification in corals
inferredcites →https://doi.org/10.1007/s12526-014-0265-9openalex-snapshot
Distribution of Noah’s giant clam, Tridacna noae
inferredcites →https://doi.org/10.1007/s12526-017-0678-3openalex-snapshot
First observations of Tridacna noae (Röding, 1798) (Bivalvia: Heterodonta: Cardiidae) in Christmas Island (Indian Ocean)
inferredcites →https://doi.org/10.1007/s12526-017-0794-0openalex-snapshot
Phylogeography of Noah’s giant clam
inferredcites →https://doi.org/10.1016/j.biocon.2014.11.004openalex-snapshot
The ecological significance of giant clams in coral reef ecosystems
inferredcites →https://doi.org/10.1016/j.cub.2008.07.060openalex-snapshot
Collapse of a New Living Species of Giant Clam in the Red Sea
inferredcites →https://doi.org/10.1016/j.cub.2012.09.036openalex-snapshot
The Magnitude of Global Marine Species Diversity
inferredcites →https://doi.org/10.1016/j.fishres.2006.03.017openalex-snapshot
Achievements and lessons learned in restocking giant clams in the Philippines
inferredcites →https://doi.org/10.1016/j.tree.2006.11.004openalex-snapshot
Cryptic species as a window on diversity and conservation
inferredcites →https://doi.org/10.1016/j.tree.2008.09.011openalex-snapshot
DNA barcoding for ecologists
inferredcites →https://doi.org/10.1016/j.tree.2017.11.007openalex-snapshot
Finding Evolutionary Processes Hidden in Cryptic Species
inferredcites →https://doi.org/10.1016/j.ympev.2014.10.002openalex-snapshot
Scorched mussels (BIVALVIA: MYTILIDAE: BRACHIDONTINAE) from the temperate coasts of South America: Phylogenetic relationships, trans-Pacific connections and the footprints of Quaternary glaciations
inferredcites →https://doi.org/10.1038/nmeth.2109openalex-snapshot
jModelTest 2: more models, new heuristics and parallel computing
inferredcites →https://doi.org/10.1080/10635150600852011openalex-snapshot
Sequence-Based Species Delimitation for the DNA Taxonomy of Undescribed Insects
inferredcites →https://doi.org/10.1080/13235818.2014.940662openalex-snapshot
Significance of new records ofTridacna squamosaLamarck, 1819, in the Tuamotu and Gambier Archipelagos (French Polynesia)
inferredcites →https://doi.org/10.1093/bioinformatics/btt499openalex-snapshot
A general species delimitation method with applications to phylogenetic placements
inferredcites →https://doi.org/10.1093/molbev/mst197openalex-snapshot
MEGA6: Molecular Evolutionary Genetics Analysis Version 6.0
inferredcites →https://doi.org/10.1093/mollus/eyw001openalex-snapshot
Comparative genetic population structure of three endangered giant clams (Cardiidae: Tridacna species) throughout the Indo-West Pacific: implications for divergence, connectivity and conservation
inferredcites →https://doi.org/10.1093/nar/gkh340openalex-snapshot
MUSCLE: multiple sequence alignment with high accuracy and high throughput
inferredcites →https://doi.org/10.1093/sysbio/sys029openalex-snapshot
MrBayes 3.2: Efficient Bayesian Phylogenetic Inference and Model Choice Across a Large Model Space
inferredcites →https://doi.org/10.1093/sysbio/syt033openalex-snapshot
Delimiting Species Using Single-Locus Data and the Generalized Mixed Yule Coalescent Approach: A Revised Method and Evaluation on Simulated Data Sets
inferredcites →https://doi.org/10.1093/sysbio/syv088openalex-snapshot
Cryptic Species or Inadequate Taxonomy? Implementation of 2D Geometric Morphometrics Based on Integumental Organs as Landmarks for Delimitation and Description of Copepod Taxa
inferredcites →https://doi.org/10.1111/1755-0998.12046openalex-snapshot
The seven deadly sins of DNA barcoding
inferredcites →https://doi.org/10.1111/1755-0998.12557openalex-snapshot
Algorithmic single‐locus species delimitation: effects of sampling effort, variation and nonmonophyly in four methods and 1870 species of beetles
inferredcites →https://doi.org/10.1111/j.1365-294x.2008.03803.xopenalex-snapshot
Strong genetic population structure in the boring giant clam, Tridacna crocea, across the Indo‐Malay Archipelago: implications related to evolutionary processes and connectivity
inferredcites →https://doi.org/10.1111/j.1365-294x.2011.05239.xopenalex-snapshot
ABGD, Automatic Barcode Gap Discovery for primary species delimitation
inferredcites →https://doi.org/10.1111/j.1365-294x.2011.05275.xopenalex-snapshot
Cryptic diversity in the pen shell Atrina pectinata (Bivalvia: Pinnidae): high divergence and hybridization revealed by molecular and morphological data
inferredcites →https://doi.org/10.1111/j.1523-1739.2008.00983.xopenalex-snapshot
Phylogeography and Limited Genetic Connectivity in the Endangered Boring Giant Clam across the Coral Triangle
inferredcites →https://doi.org/10.1111/j.1558-5646.1997.tb03660.xopenalex-snapshot
GENETIC STRUCTURE OF GIANT CLAM (TRIDACNA MAXIMA) POPULATIONS IN THE WEST PACIFIC IS NOT CONSISTENT WITH DISPERSAL BY PRESENT-DAY OCEAN CURRENTS
inferredcites →https://doi.org/10.1111/jbi.13163openalex-snapshot
Historical divergences associated with intermittent land bridges overshadow isolation by larval dispersal in co‐distributed species of Tridacna giant clams
inferredcites →https://doi.org/10.1111/maec.12389openalex-snapshot
Concordance of microsatellite and mitochondrial DNA markers in detecting genetic population structure in the boring giant clam Tridacna crocea across the Indo‐Malay Archipelago
inferredcites →https://doi.org/10.1111/mec.13604openalex-snapshot
Species discovery and validation in a cryptic radiation of endangered primates: coalescent‐based species delimitation in M adagascar's mouse lemurs
inferredcites →https://doi.org/10.1126/science.351.6271.323openalex-snapshot
Shell trade pushes giant clams to the brink
inferredcites →https://doi.org/10.1146/annurev.es.24.110193.001201openalex-snapshot
Sibling Species in the Sea
inferredcites →https://doi.org/10.1186/1471-2148-7-214openalex-snapshot
BEAST: Bayesian evolutionary analysis by sampling trees
inferredcites →https://doi.org/10.1201/9781482267273openalex-snapshot
Oceanography and Marine Biology, An Annual Review
inferredcites →https://doi.org/10.1201/b21944-5openalex-snapshot
Giant Clams (Bivalvia: Cardiidae: Tridacninae): A Comprehensive Update of Species and their Distribution, Current Threats and Conservation Status
inferredcites →https://doi.org/10.1371/journal.pbio.0020312openalex-snapshot
Identification of Birds through DNA Barcodes
inferredcites →https://doi.org/10.1371/journal.pone.0080858openalex-snapshot
A Novel Widespread Cryptic Species and Phylogeographic Patterns within Several Giant Clam Species (Cardiidae: Tridacna) from the Indo-Pacific Ocean
inferredcites →https://doi.org/10.22004/ag.econ.118042openalex-snapshot
Giant Clams in Asia and the Pacific
inferredcites →https://doi.org/10.2307/2411153openalex-snapshot
Genetic Structure of Giant Clam (Tridacna maxima) Populations in the West Pacific is Not Consistent with Dispersal by Present-Day Ocean Currents
inferredcites →https://doi.org/10.3853/j.0067-1975.33.1981.196openalex-snapshot
Functional morphology and evolution in the Tridacnidae (Mollusca: Bivalvia: Cardiacea)
inferredcites →https://doi.org/10.4308/hjb.14.4.162openalex-snapshot
Molecular Phylogeny of Giant Clams Based on Mitochondrial DNA Cytochrome C Oxidase I Gene
inferredcites →https://doi.org/10.5281/zenodo.15145663openalex-snapshot
Table 1 in A new Gammarus species from Xinjiang Uygur Autonomous Region (China) with a key to Xinjiang freshwater gammarids (Crustacea, Amphipoda, Gammaridae)
inferredcites →https://doi.org/10.5281/zenodo.5342459openalex-snapshot
The Distribution And Status Of Giant Clams (Family Tridacnidae) - A Short Review
inferredcites →https://doi.org/10.5281/zenodo.5353461openalex-snapshot
Tridacna noae (Röding, 1798) - a valid giant clam species separated from T. maxima (Röding, 1798) by morphological and genetic data
inferredcites →https://doi.org/10.5343/bms.2013.1002openalex-snapshot
Concordant phylogenetic patterns inferred from mitochondrial and microsatellite DNA in the giant clam Tridacna crocea
inferredcites →https://doi.org/10.5343/bms.2013.1003openalex-snapshot
Concordance between phylogeographic and biogeographic boundaries in the Coral Triangle: conservation implications based on comparative analyses of multiple giant clam species

What points at this work

Incoming claims: where this work appears in other papers’ reference lists and arguments.

inferred← citeshttps://doi.org/10.1007/s13127-022-00541-3zenodo-depositor-declared
Crossing the polar front—Antarctic species discovery in the nudibranch genus Tritoniella (Gastropoda)
inferred← citeshttps://doi.org/10.1002/aff2.70230openalex-snapshot
The Evolution of Giant Clam Science: From Foundational Studies to Emerging Frontiers
inferred← citeshttps://doi.org/10.1002/aqc.3807openalex-snapshot
Population status and genetic diversity of two endangered giant clams (Tridacna squamosa and Tridacna maxima ) on the fringing reefs of Perhentian Islands, Malaysia
inferred← citeshttps://doi.org/10.1002/ece3.70050openalex-snapshot
DNA barcoding is currently unreliable for species identification in most crayfishes
inferred← citeshttps://doi.org/10.1002/ece3.70474openalex-snapshot
Of Clams and Clades: Genetic Diversity and Connectivity of Small Giant Clams (Tridacna maxima) in the Southern Pacific Ocean
inferred← citeshttps://doi.org/10.1007/s00338-020-02039-wopenalex-snapshot
Genome skimming resolves the giant clam (Bivalvia: Cardiidae: Tridacninae) tree of life
inferred← citeshttps://doi.org/10.1007/s00338-022-02217-yopenalex-snapshot
DNA barcoding validates new sightings of Tridacna elongatissima in Tanzania and Mozambique (Western Indian Ocean)
inferred← citeshttps://doi.org/10.1007/s11802-026-6527-xopenalex-snapshot
DNA Barcoding Analysis of Mollusks in the Coral Reef-Sandy Substrate Mosaic of Wuzhizhou Island, Hainan
inferred← citeshttps://doi.org/10.1007/s13131-023-2265-8openalex-snapshot
Impacts of Early Pleistocene glacial vicariance among refugial lineages and Mid-Late Pleistocene interglacial dispersal and expansion on forging population genetic structure of the giant clam Tridacna squamosa (Bivalvia: Cardiidae: Tridacninae) across the Red Sea and Indo-West Pacific oceans
inferred← citeshttps://doi.org/10.1016/j.aquaculture.2024.740563openalex-snapshot
The role of aquaculture in the international trade of giant clams (Tridacninae) for the aquarium industry (2001–2019)
inferred← citeshttps://doi.org/10.1016/j.rsma.2024.103546openalex-snapshot
Vanishing giants: An assessment on the population status of giant clams across Malaysia
inferred← citeshttps://doi.org/10.1111/ivb.12348openalex-snapshot
Barcoding of South African forest‐dwelling snails (Mollusca: Gastropoda) reveals widespread cryptic diversity
inferred← citeshttps://doi.org/10.14710/jkt.v26i3.18421openalex-snapshot
Catatan Pertama Distribusi Tridacna noae (Röding, 1798) dari Perairan Kepulauan Kei, Maluku
inferred← citeshttps://doi.org/10.15408/kauniyah.v15i1.17631openalex-snapshot
Identifikasi dan Analisis Filogentik Kerang Kima (Genus Tridacna) dari Pulau Kur Menggunakan DNA Barcoding
inferred← citeshttps://doi.org/10.2983/035.041.0308openalex-snapshot
Comparative Mitogenomic Analysis Indicates Possible Cryptic Species in Lambis lambis (Gastropoda: Strombidae)
inferred← citeshttps://doi.org/10.3389/fmars.2021.753553openalex-snapshot
Phylogeography and Taxonomic Revision of the Pen Shell Atrina pectinata Species Complex in the South China Sea
inferred← citeshttps://doi.org/10.3389/fmars.2021.774925openalex-snapshot
Diversity of Three Small Type’s Giant Clams and Their Associated Endosymbiotic Symbiodiniaceae at Hainan and Xisha Islands, South China Sea
inferred← citeshttps://doi.org/10.65658/j.hndk.2025042401openalex-snapshot
Research progresses on the species diversity and systematic taxonomy of marine mollusca in Hainan Province
inferred← citeshttps://doi.org/10.7717/peerj.20290openalex-snapshot
Status and trends of giant clam populations demonstrate the effectiveness of village-based protection in American Sāmoa
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