On the public citation graph
The spread of LAGLIDADG homing endonuclease genes in rDNA
0 signed · 81 inferred · view as graph
Inferred edges come from two machine sources: sweeps of open repository metadata (mostly SSRN and Zenodo), and a bulk OpenAlex citation snapshot. Every row below is labelled with the one it came from. Neither is a complete citation index — absence here is not evidence of absence.
Is this your work? Sign in with ORCID and put your name on the
claims that are yours.
Reference health. See whether every reference in this work resolves to a
known work and none has been retracted — and get a dated CiteStamped
badge you can embed.
What this work says
Outgoing claims: the papers this work cites, builds on, or argues with.
inferredcites →https://doi.org/10.1006/jmbi.1998.2519openalex-snapshot
Crystal structure of the thermostable archaeal intron-encoded endonuclease I- Dmo I 1 1Edited by I. A. Wilson
inferredcites →https://doi.org/10.1006/mpev.1999.0711openalex-snapshot
The Distribution of Group I Introns in Lichen Algae Suggests That Lichenization Facilitates Intron Lateral Transfer
inferredcites →https://doi.org/10.1007/s000180050372openalex-snapshot
Homing endonucleases: structure, function and evolution
inferredcites →https://doi.org/10.1016/0092-8674(89)90971-9openalex-snapshot
Reverse self-splicing of the tetrahymena group I intron: Implication for the directionality of splicing and for intron transposition
inferredcites →https://doi.org/10.1016/j.jmb.2003.09.068openalex-snapshot
The Crystal Structure of the Gene Targeting Homing Endonuclease I-SceI Reveals the Origins of its Target Site Specificity
inferredcites →https://doi.org/10.1016/s0022-2836(02)00895-1openalex-snapshot
Distribution of rRNA Introns in the Three-dimensional Structure of the Ribosome
inferredcites →https://doi.org/10.1016/s0022-2836(03)00447-9openalex-snapshot
Flexible DNA Target Site Recognition by Divergent Homing Endonuclease Isoschizomers I-CreI and I-MsoI
inferredcites →https://doi.org/10.1016/s1434-4610(98)70015-xopenalex-snapshot
The Origin and Evolution of Protist Group I Introns
inferredcites →https://doi.org/10.1038/27952openalex-snapshot
DNA binding and cleavage by the nuclear intron-encoded homing endonuclease I-PpoI
inferredcites →https://doi.org/10.1073/pnas.1434268100openalex-snapshot
Active self-splicing group I introns in 23S rRNA genes of hyperthermophilic bacteria, derived from introns in eukaryotic organelles
inferredcites →https://doi.org/10.1073/pnas.91.25.11983openalex-snapshot
Evolution of mobile group I introns: recognition of intron sequences by an intron-encoded endonuclease.
inferredcites →https://doi.org/10.1073/pnas.95.5.2134openalex-snapshot
Integration of the Tetrahymena group I intron into bacterial rRNA by reverse splicing in vivo
inferredcites →https://doi.org/10.1073/pnas.96.24.13880openalex-snapshot
Recurrent invasion and extinction of a selfish gene
inferredcites →https://doi.org/10.1074/jbc.270.51.30237openalex-snapshot
Mechanisms of Intron Mobility
inferredcites →https://doi.org/10.1078/143446103764928495openalex-snapshot
Discovery of a Group I Intron in the SSU rDNA of Ploeotia costata (Euglenozoa)
inferredcites →https://doi.org/10.1093/bioinformatics/12.4.357openalex-snapshot
Tree View: An application to display phylogenetic trees on personal computers
inferredcites →https://doi.org/10.1093/bioinformatics/17.12.1244openalex-snapshot
MEGA2: molecular evolutionary genetics analysis software
inferredcites →https://doi.org/10.1093/bioinformatics/18.3.502openalex-snapshot
TREE-PUZZLE: maximum likelihood phylogenetic analysis using quartets and parallel computing
inferredcites →https://doi.org/10.1093/bioinformatics/btg180openalex-snapshot
MrBayes 3: Bayesian phylogenetic inference under mixed models
inferredcites →https://doi.org/10.1093/molbev/msh005openalex-snapshot
The Evolution of Homing Endonuclease Genes and Group I Introns in Nuclear rDNA
inferredcites →https://doi.org/10.1093/nar/22.22.4673openalex-snapshot
CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice
inferredcites →https://doi.org/10.1093/nar/24.20.3982openalex-snapshot
Protein footprinting approach to mapping DNA binding sites of two archaeal homing enzymes: evidence for a two-domain protein structure
inferredcites →https://doi.org/10.1093/nar/25.13.2610openalex-snapshot
Evolutionarily conserved and functionally important residues in the I- CeuI homing endonuclease
inferredcites →https://doi.org/10.1093/nar/25.17.3379openalex-snapshot
Homing endonucleases: keeping the house in order
inferredcites →https://doi.org/10.1093/nar/25.22.4626openalex-snapshot
Statistical modeling and analysis of the LAGLIDADG family of site- specific endonucleases and identification of an intein that encodes a site-specific endonuclease of the HNH family
inferredcites →https://doi.org/10.1093/nar/29.18.3757openalex-snapshot
Homing endonucleases: structural and functional insight into the catalysts of intron/intein mobility
inferredcites →https://doi.org/10.1093/nar/29.4.960openalex-snapshot
Rapid evolution of the DNA-binding site in LAGLIDADG homing endonucleases
inferredcites →https://doi.org/10.1093/oxfordjournals.molbev.a003851openalex-snapshot
A General Empirical Model of Protein Evolution Derived from Multiple Protein Families Using a Maximum-Likelihood Approach
inferredcites →https://doi.org/10.1093/oxfordjournals.molbev.a003952openalex-snapshot
Evolutionary Dynamics of Multiple Group I Introns in Nuclear Ribosomal RNA Genes of Endoparasitic Fungi of the Genus Cordyceps
inferredcites →https://doi.org/10.1093/oxfordjournals.molbev.a003954openalex-snapshot
A Structural and Phylogenetic Analysis of the Group IC1 Introns in the Order Bangiales (Rhodophyta)
inferredcites →https://doi.org/10.1093/oxfordjournals.molbev.a025658openalex-snapshot
Phylogenetic evidence for horizontal transmission of group I introns in the nuclear ribosomal DNA of mushroom-forming fungi
inferredcites →https://doi.org/10.1093/oxfordjournals.molbev.a026237openalex-snapshot
A Diverse Population of Introns in the Nuclear Ribosomal Genes of Ericoid Mycorrhizal Fungi Includes Elements with Sequence Similarity to Endonuclease-Coding Genes
inferredcites →https://doi.org/10.1093/oxfordjournals.molbev.a040234openalex-snapshot
Evolutionary transfer of ORF-containing group I introns between different subcellular compartments (chloroplast and mitochondrion).
inferredcites →https://doi.org/10.1186/1471-2148-3-7openalex-snapshot
The exon context and distribution of Euascomycetes rRNA spliceosomal introns
What points at this work
Incoming claims: where this work appears in other papers’ reference lists and arguments.
inferred← citeshttps://doi.org/10.3897/phytokeys.241.118903zenodo-depositor-declared
Description of Navicula vanseea sp. nov. (Naviculales, Naviculaceae), a new species of diatom from the highly alkaline Lake Van (Republic of Türkiye) with complete characterisation of its organellar genomes and multigene phylogeny
inferred← citeshttps://doi.org/10.1007/3-540-29474-0_2openalex-snapshot
Homing Endonucleases and the Yeast Mitochondrial ω Locus — A Historical Perspective
inferred← citeshttps://doi.org/10.1007/978-1-62703-968-0_3openalex-snapshot
PCR-Based Bioprospecting for Homing Endonucleases in Fungal Mitochondrial rRNA Genes
inferred← citeshttps://doi.org/10.1007/978-3-642-22380-8_13openalex-snapshot
Introns, Mobile Elements, and Plasmids
inferred← citeshttps://doi.org/10.1007/s00239-004-0152-2openalex-snapshot
Divergent Histories of rDNA Group I Introns in the Lichen Family Physciaceae
inferred← citeshttps://doi.org/10.1016/j.fgb.2009.07.005openalex-snapshot
The Cryphonectria parasitica mitochondrial rns gene: Plasmid-like elements, introns and homing endonucleases
inferred← citeshttps://doi.org/10.1016/j.fgb.2013.01.005openalex-snapshot
The mtDNA rns gene landscape in the Ophiostomatales and other fungal taxa: Twintrons, introns, and intron-encoded proteins
inferred← citeshttps://doi.org/10.1016/j.fgb.2014.01.004openalex-snapshot
A homing endonuclease with a switch: Characterization of a twintron encoded homing endonuclease
inferred← citeshttps://doi.org/10.1016/j.funbio.2011.07.007openalex-snapshot
The highly variable mitochondrial small-subunit ribosomal RNA gene of Ophiostoma minus
inferred← citeshttps://doi.org/10.1016/j.funbio.2013.10.002openalex-snapshot
Evolutionary dynamics of introns and their open reading frames in the U7 region of the mitochondrial rnl gene in species of Ceratocystis
inferred← citeshttps://doi.org/10.1016/j.funbio.2014.05.002openalex-snapshot
I-OmiI and I-OmiII: Two intron-encoded homing endonucleases within the Ophiostoma minus rns gene
inferred← citeshttps://doi.org/10.1016/j.genrep.2026.102506openalex-snapshot
The convergence of synthetic biology and metagenomics: Current advances and future perspectives
inferred← citeshttps://doi.org/10.1016/j.mycres.2007.11.017openalex-snapshot
The sporadic occurrence of a group I intron-like element in the mtDNA rnl gene of Ophiostoma novo-ulmi subsp. americana
inferred← citeshttps://doi.org/10.1016/j.tig.2004.12.007openalex-snapshot
The natural history of group I introns
inferred← citeshttps://doi.org/10.1016/j.ympev.2010.02.013openalex-snapshot
Evolutionary dynamics of introns and homing endonuclease ORFs in a region of the large subunit of the mitochondrial rRNA in Glomus species (arbuscular mycorrhizal fungi, Glomeromycota)
inferred← citeshttps://doi.org/10.1016/j.ympev.2011.09.027openalex-snapshot
Invasion of protein coding genes by green algal ribosomal group I introns
inferred← citeshttps://doi.org/10.1017/s095375620500376xopenalex-snapshot
Optional mitochondrial introns and evidence for a homing-endonuclease gene in the mtDNA rnl gene in Ophiostoma ulmi s. lat.
inferred← citeshttps://doi.org/10.1038/s41598-018-35926-yopenalex-snapshot
The mitochondrial genome of Endoconidiophora resinifera is intron rich
inferred← citeshttps://doi.org/10.1080/24701394.2019.1687691openalex-snapshot
The fungal mitochondrial Nad5 pan-genic intron landscape
inferred← citeshttps://doi.org/10.1093/gbe/evaa126openalex-snapshot
The Coevolution of Fungal Mitochondrial Introns and Their Homing Endonucleases (GIY-YIG and LAGLIDADG)
inferred← citeshttps://doi.org/10.1093/molbev/msp044openalex-snapshot
Phylogenetically Close Group I Introns with Different Positions among Paramecium bursaria Photobionts Imply a Primitive Stage of Intron Diversification
inferred← citeshttps://doi.org/10.1093/molbev/msp145openalex-snapshot
Genes within Genes: Multiple LAGLIDADG Homing Endonucleases Target the Ribosomal Protein S3 Gene Encoded within an rnl Group I Intron of Ophiostoma and Related Taxa
inferred← citeshttps://doi.org/10.1093/nar/gki564openalex-snapshot
The recent transfer of a homing endonuclease gene
inferred← citeshttps://doi.org/10.1093/nar/gkw864openalex-snapshot
Characterization of homing endonuclease binding and cleavage specificities using yeast surface display SELEX (YSD-SELEX)
inferred← citeshttps://doi.org/10.1111/1574-6968.12387openalex-snapshot
Mobile elements and mitochondrial genome expansion in the soil fungus and potato pathogenRhizoctonia solaniAG-3
inferred← citeshttps://doi.org/10.1111/jpy.12600openalex-snapshot
Origin and evolution of chloroplast group I introns in lichen algae
inferred← citeshttps://doi.org/10.1128/jb.00675-09openalex-snapshot
Group I Introns and Inteins: Disparate Origins but Convergent Parasitic Strategies
inferred← citeshttps://doi.org/10.1128/jb.00812-07openalex-snapshot
The Unusual 23S rRNA Gene of Coxiella burnetii : Two Self-Splicing Group I Introns Flank a 34-Base-Pair Exon, and One Element Lacks the Canonical ΩG
inferred← citeshttps://doi.org/10.1139/b06-117openalex-snapshot
Identification of conserved regions in the plastid genome: implications for DNA barcoding and biological function
inferred← citeshttps://doi.org/10.1139/cjm-2017-0067openalex-snapshot
Three new active members of the I-OnuI family of homing endonucleases
inferred← citeshttps://doi.org/10.1139/g2012-049openalex-snapshot
Homing endonucleases: DNA scissors on a mission
inferred← citeshttps://doi.org/10.1186/1471-2148-6-71openalex-snapshot
Putative cross-kingdom horizontal gene transfer in sponge (Porifera) mitochondria
inferred← citeshttps://doi.org/10.1186/1471-2148-7-159openalex-snapshot
Cyanobacterial ribosomal RNA genes with multiple, endonuclease-encoding group I introns
inferred← citeshttps://doi.org/10.1186/s12862-017-0928-9openalex-snapshot
Evolution of group I introns in Porifera: new evidence for intron mobility and implications for DNA barcoding
inferred← citeshttps://doi.org/10.1186/s13100-018-0129-0openalex-snapshot
Deletion of the sex-determining gene SXI1α enhances the spread of mitochondrial introns in Cryptococcus neoformans
inferred← citeshttps://doi.org/10.1186/s40064-016-3076-6openalex-snapshot
The diversity of mtDNA rns introns among strains of Ophiostoma piliferum, Ophiostoma pluriannulatum and related species
inferred← citeshttps://doi.org/10.1261/rna.5202704openalex-snapshot
Long-term evolution of the S788 fungal nuclear small subunit rRNA group I introns
inferred← citeshttps://doi.org/10.1371/journal.pone.0049551openalex-snapshot
The Mitochondrial LSU rRNA Group II Intron of Ustilago maydis Encodes an Active Homing Endonuclease Likely Involved in Intron Mobility
inferred← citeshttps://doi.org/10.1371/journal.pone.0084325openalex-snapshot
The Mitochondrial Genome of the Prasinophyte Prasinoderma coloniale Reveals Two Trans-Spliced Group I Introns in the Large Subunit rRNA Gene
inferred← citeshttps://doi.org/10.1371/journal.pone.0150097openalex-snapshot
Using Group II Introns for Attenuating the In Vitro and In Vivo Expression of a Homing Endonuclease
inferred← citeshttps://doi.org/10.1371/journal.pone.0173734openalex-snapshot
Evolutionary and biogeographical implications of degraded LAGLIDADG endonuclease functionality and group I intron occurrence in stony corals (Scleractinia) and mushroom corals (Corallimorpharia)
inferred← citeshttps://doi.org/10.1534/g3.113.009910openalex-snapshot
Horizontal Transfer and Gene Conversion as an Important Driving Force in Shaping the Landscape of Mitochondrial Introns
inferred← citeshttps://doi.org/10.1534/genetics.108.096859openalex-snapshot
Thea2Mating-Type Locus Geneslga2andrga2Direct Uniparental Mitochondrial DNA (mtDNA) Inheritance and Constrain mtDNA Recombination During Sexual Development ofUstilago maydis
inferred← citeshttps://doi.org/10.3389/fpls.2020.01296openalex-snapshot
Sequencing and Analysis of the Complete Organellar Genomes of Prototheca wickerhamii
Editorial review for independent work. ICSAC — the Institute for Complexity
Science and Advanced Computing — runs a structured editorial panel for researchers
publishing outside journals, and publishes on CiteStamp rails. Submission is free
and goes through ORCID: icsacinstitute.org/submit.