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Phosphorylation of Tet3 by cdk5 is critical for robust activation of BRN2 during neuronal differentiation

https://doi.org/10.1093/nar/gkz1144
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What this work says

Outgoing claims: the papers this work cites, builds on, or argues with.

inferredcites →https://doi.org/10.1007/978-1-62703-706-8_20openalex-snapshot
Hydroxymethylated DNA Immunoprecipitation (hmeDIP)
inferredcites →https://doi.org/10.1007/s12035-014-8734-5openalex-snapshot
Critical Role of Tet3 in Neural Progenitor Cell Maintenance and Terminal Differentiation
inferredcites →https://doi.org/10.1016/j.cell.2012.04.027openalex-snapshot
Base-Resolution Analysis of 5-Hydroxymethylcytosine in the Mammalian Genome
inferredcites →https://doi.org/10.1016/j.cell.2012.11.022openalex-snapshot
MeCP2 Binds to 5hmC Enriched within Active Genes and Accessible Chromatin in the Nervous System
inferredcites →https://doi.org/10.1016/j.cell.2013.02.004openalex-snapshot
Dynamic Readers for 5-(Hydroxy)Methylcytosine and Its Oxidized Derivatives
inferredcites →https://doi.org/10.1016/j.cell.2013.04.002openalex-snapshot
Genome-wide Analysis Reveals TET- and TDG-Dependent 5-Methylcytosine Oxidation Dynamics
inferredcites →https://doi.org/10.1016/j.cell.2013.08.052openalex-snapshot
Poly(ADP-ribosyl)ation Regulates Insulator Function and Intrachromosomal Interactions in Drosophila
inferredcites →https://doi.org/10.1016/j.celrep.2013.01.001openalex-snapshot
High-Resolution Enzymatic Mapping of Genomic 5-Hydroxymethylcytosine in Mouse Embryonic Stem Cells
inferredcites →https://doi.org/10.1016/j.celrep.2015.03.020openalex-snapshot
TET3 Is Recruited by REST for Context-Specific Hydroxymethylation and Induction of Gene Expression
inferredcites →https://doi.org/10.1016/j.celrep.2015.12.044openalex-snapshot
Tet3 Reads 5-Carboxylcytosine through Its CXXC Domain and Is a Potential Guardian against Neurodegeneration
inferredcites →https://doi.org/10.1016/j.celrep.2016.10.081openalex-snapshot
Tet3-Mediated DNA Demethylation Contributes to the Direct Conversion of Fibroblast to Functional Neuron
inferredcites →https://doi.org/10.1016/j.molcel.2011.04.005openalex-snapshot
Genome-wide Regulation of 5hmC, 5mC, and Gene Expression by Tet1 Hydroxylase in Mouse Embryonic Stem Cells
inferredcites →https://doi.org/10.1016/j.neuron.2015.11.030openalex-snapshot
Role of Tet1/3 Genes and Chromatin Remodeling Genes in Cerebellar Circuit Formation
inferredcites →https://doi.org/10.1016/j.stem.2014.01.001openalex-snapshot
Tet and TDG Mediate DNA Demethylation Essential for Mesenchymal-to-Epithelial Transition in Somatic Cell Reprogramming
inferredcites →https://doi.org/10.1038/celldisc.2015.17openalex-snapshot
AF9 promotes hESC neural differentiation through recruiting TET2 to neurodevelopmental gene loci for methylcytosine hydroxylation
inferredcites →https://doi.org/10.1038/nature10008openalex-snapshot
Dynamic regulation of 5-hydroxymethylcytosine in mouse ES cells and during differentiation
inferredcites →https://doi.org/10.1038/nature10102openalex-snapshot
Genome-wide mapping of 5-hydroxymethylcytosine in embryonic stem cells
inferredcites →https://doi.org/10.1038/nbt.1732openalex-snapshot
Selective chemical labeling reveals the genome-wide distribution of 5-hydroxymethylcytosine
inferredcites →https://doi.org/10.1038/ncomms10637openalex-snapshot
Downregulation of TLX induces TET3 expression and inhibits glioblastoma stem cell self-renewal and tumorigenesis
inferredcites →https://doi.org/10.1038/ncomms12418openalex-snapshot
DNA hydroxymethylation controls cardiomyocyte gene expression in development and hypertrophy
inferredcites →https://doi.org/10.1038/ncomms2995openalex-snapshot
Dynamics of 5-hydroxymethylcytosine during mouse spermatogenesis
inferredcites →https://doi.org/10.1038/nn.2959openalex-snapshot
5-hmC–mediated epigenetic dynamics during postnatal neurodevelopment and aging
inferredcites →https://doi.org/10.1038/nn.4008openalex-snapshot
Tet3 regulates synaptic transmission and homeostatic plasticity via DNA oxidation and repair
inferredcites →https://doi.org/10.1038/nprot.2007.147openalex-snapshot
Generation of a defined and uniform population of CNS progenitors and neurons from mouse embryonic stem cells
inferredcites →https://doi.org/10.1038/nprot.2012.016openalex-snapshot
Differential gene and transcript expression analysis of RNA-seq experiments with TopHat and Cufflinks
inferredcites →https://doi.org/10.1038/nrg.2017.33openalex-snapshot
TET-mediated active DNA demethylation: mechanism, function and beyond
inferredcites →https://doi.org/10.1038/nrg3354openalex-snapshot
DNA methylation: roles in mammalian development
inferredcites →https://doi.org/10.1038/nrg3663openalex-snapshot
CTCF: an architectural protein bridging genome topology and function
inferredcites →https://doi.org/10.1038/s41586-018-0350-5openalex-snapshot
Glucose-regulated phosphorylation of TET2 by AMPK reveals a pathway linking diabetes to cancer
inferredcites →https://doi.org/10.1038/s41592-018-0038-7openalex-snapshot
A reassessment of DNA-immunoprecipitation-based genomic profiling
inferredcites →https://doi.org/10.1073/pnas.1318906111openalex-snapshot
Neocortical Tet3-mediated accumulation of 5-hydroxymethylcytosine promotes rapid behavioral adaptation
inferredcites →https://doi.org/10.1073/pnas.1412327111openalex-snapshot
Dissecting the dynamic changes of 5-hydroxymethylcytosine in T-cell development and differentiation
inferredcites →https://doi.org/10.1073/pnas.1617802113openalex-snapshot
Tet proteins influence the balance between neuroectodermal and mesodermal fate choice by inhibiting Wnt signaling
inferredcites →https://doi.org/10.1074/jbc.m113.524140openalex-snapshot
Differential Regulation of the Ten-Eleven Translocation (TET) Family of Dioxygenases by O-Linked β-N-Acetylglucosamine Transferase (OGT)
inferredcites →https://doi.org/10.1074/jbc.m114.605881openalex-snapshot
Phosphorylation of TET Proteins Is Regulated via O-GlcNAcylation by the O-Linked N-Acetylglucosamine Transferase (OGT)
inferredcites →https://doi.org/10.1093/bioinformatics/btr189openalex-snapshot
MEME-ChIP: motif analysis of large DNA datasets
inferredcites →https://doi.org/10.1093/bioinformatics/btt650openalex-snapshot
MEDIPS: genome-wide differential coverage analysis of sequencing data derived from DNA enrichment experiments
inferredcites →https://doi.org/10.1093/nar/gkt091openalex-snapshot
Genome-wide comparison of DNA hydroxymethylation in mouse embryonic stem cells and neural progenitor cells by a new comparative hMeDIP-seq method
inferredcites →https://doi.org/10.1093/nar/gkt1261openalex-snapshot
PGC7 suppresses TET3 for protecting DNA methylation
inferredcites →https://doi.org/10.1093/nar/gkx1295openalex-snapshot
Brain-specific deletion of histone variant H2A.z results in cortical neurogenesis defects and neurodevelopmental disorder
inferredcites →https://doi.org/10.1093/nar/gkx314openalex-snapshot
RSAT matrix-clustering: dynamic exploration and redundancy reduction of transcription factor binding motif collections
inferredcites →https://doi.org/10.1101/gad.2036011openalex-snapshot
Genome-wide analysis of 5-hydroxymethylcytosine distribution reveals its dual function in transcriptional regulation in mouse embryonic stem cells
inferredcites →https://doi.org/10.1111/gtc.12107openalex-snapshot
TET 3– OGT interaction increases the stability and the presence of OGT in chromatin
inferredcites →https://doi.org/10.1126/science.1169786openalex-snapshot
The Nuclear DNA Base 5-Hydroxymethylcytosine Is Present in Purkinje Neurons and the Brain
inferredcites →https://doi.org/10.1126/science.1170116openalex-snapshot
Conversion of 5-Methylcytosine to 5-Hydroxymethylcytosine in Mammalian DNA by MLL Partner TET1
inferredcites →https://doi.org/10.1126/science.1210944openalex-snapshot
Tet-Mediated Formation of 5-Carboxylcytosine and Its Excision by TDG in Mammalian DNA
inferredcites →https://doi.org/10.1126/science.1229277openalex-snapshot
Germline DNA Demethylation Dynamics and Imprint Erasure Through 5-Hydroxymethylcytosine
inferredcites →https://doi.org/10.1146/annurev-cellbio-092910-154023openalex-snapshot
Cyclin-Dependent Kinases in Brain Development and Disease
inferredcites →https://doi.org/10.1186/1756-8935-6-s1-p52openalex-snapshot
MeCP2 binds to 5hmc enriched within active genes and accessible chromatin in the nervous system
inferredcites →https://doi.org/10.1186/gb-2011-12-6-r54openalex-snapshot
5-Hydroxymethylcytosine is associated with enhancers and gene bodies in human embryonic stem cells
inferredcites →https://doi.org/10.1186/gb-2013-14-8-r83openalex-snapshot
Ontogeny, distribution and potential roles of 5-hydroxymethylcytosine in human liver function
inferredcites →https://doi.org/10.1186/gb-2014-15-3-r49openalex-snapshot
Whole-genome analysis of 5-hydroxymethylcytosine and 5-methylcytosine at base resolution in the human brain
inferredcites →https://doi.org/10.1242/jcs.147553openalex-snapshot
Cdk5 activity in the brain – multiple paths of regulation
inferredcites →https://doi.org/10.1242/jcs.168849openalex-snapshot
A Brn2–Zic1 axis specifies the neuronal fate of retinoic-acid-treated embryonic stem cells
inferredcites →https://doi.org/10.12703/p7-01openalex-snapshot
H2A.Z: a molecular rheostat for transcriptional control
inferredcites →https://doi.org/10.15252/embr.201438923openalex-snapshot
MicroRNA‐15b promotes neurogenesis and inhibits neural progenitor proliferation by directly repressing TET3 during early neocortical development
inferredcites →https://doi.org/10.15252/embr.201643179openalex-snapshot
TET3‐mediated DNA oxidation promotes ATR‐dependent DNA damage response
inferredcites →https://doi.org/10.18632/oncotarget.14538openalex-snapshot
Biological functions of CDK5 and potential CDK5 targeted clinical treatments
inferredcites →https://doi.org/10.3978/j.issn.2305-5839.2015.03.61openalex-snapshot
Roscovitine in cancer and other diseases.

What points at this work

Incoming claims: where this work appears in other papers’ reference lists and arguments.

inferred← citeshttps://doi.org/10.2139/ssrn.4018612openalex-extracted
inferred← citeshttps://doi.org/10.1002/dneu.70034openalex-snapshot
Roles of POU3F2 in Brain Development and Neuropsychiatric Disorders
inferred← citeshttps://doi.org/10.1007/s00018-022-04396-xopenalex-snapshot
Mechanisms that regulate the activities of TET proteins
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ApoE maintains neuronal integrity via microRNA and H3K27me3-mediated repression
inferred← citeshttps://doi.org/10.1016/j.pharmr.2025.100043openalex-snapshot
The pharmacology of vitamin C
inferred← citeshttps://doi.org/10.1016/j.phrs.2026.108095openalex-snapshot
The TET/5hmC mediated epigenetic landscape in glioma: From molecular mechanisms to therapeutic targeting and future perspectives
inferred← citeshttps://doi.org/10.1016/j.tcb.2020.09.003openalex-snapshot
Histone Variants and Histone Modifications in Neurogenesis
inferred← citeshttps://doi.org/10.1038/s41392-023-01537-xopenalex-snapshot
TET (Ten-eleven translocation) family proteins: structure, biological functions and applications
inferred← citeshttps://doi.org/10.1038/s41467-022-32915-8openalex-snapshot
Vitamin C epigenetically controls osteogenesis and bone mineralization
inferred← citeshttps://doi.org/10.1038/s43018-021-00223-7openalex-snapshot
Downregulation of the FTO m6A RNA demethylase promotes EMT-mediated progression of epithelial tumors and sensitivity to Wnt inhibitors
inferred← citeshttps://doi.org/10.1042/bst20240291openalex-snapshot
Understanding the role of ten-eleven translocation family proteins in kidney diseases
inferred← citeshttps://doi.org/10.1073/pnas.2204179119openalex-snapshot
Truncated Tau caused by intron retention is enriched in Alzheimer’s disease cortex and exhibits altered biochemical properties
inferred← citeshttps://doi.org/10.1080/15592294.2021.1917152openalex-snapshot
The chromatin remodelling protein LSH/HELLS regulates the amount and distribution of DNA hydroxymethylation in the genome
inferred← citeshttps://doi.org/10.1177/0271678x20912965openalex-snapshot
TET3 regulates DNA hydroxymethylation of neuroprotective genes following focal ischemia
inferred← citeshttps://doi.org/10.1186/s13578-022-00821-7openalex-snapshot
The phosphorylation to acetylation/methylation cascade in transcriptional regulation: how kinases regulate transcriptional activities of DNA/histone-modifying enzymes
inferred← citeshttps://doi.org/10.1210/endocr/bqag102openalex-snapshot
BRN2 in lineage plasticity: a prostate cancer-focused perspective
inferred← citeshttps://doi.org/10.1371/journal.pone.0338190openalex-snapshot
Housing environment bilaterally alters transcriptomic profile in the rat hippocampal CA1 region
inferred← citeshttps://doi.org/10.3389/fimmu.2021.696280openalex-snapshot
The Role of Host Cell DNA Methylation in the Immune Response to Bacterial Infection
inferred← citeshttps://doi.org/10.3389/fncel.2022.951202openalex-snapshot
The role of Cdk5 in neurological disorders
inferred← citeshttps://doi.org/10.3390/biom14080993openalex-snapshot
The Function of H2A Histone Variants and Their Roles in Diseases
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