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What this work says
Outgoing claims: the papers this work cites, builds on, or argues with.
inferredcites →https://doi.org/10.1016/s0076-6879(96)66012-1openalex-snapshot
[10] Entrez: Molecular biology database and retrieval system
inferredcites →https://doi.org/10.1080/17460441.2016.1216967openalex-snapshot
Getting the most out of PubChem for virtual screening
inferredcites →https://doi.org/10.1093/bioinformatics/btz856openalex-snapshot
SPDI: data model for variants and applications at NCBI
inferredcites →https://doi.org/10.1093/nar/22.22.4673openalex-snapshot
CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice
inferredcites →https://doi.org/10.1093/nar/28.1.352openalex-snapshot
dbSNP: a database of single nucleotide polymorphisms
inferredcites →https://doi.org/10.1093/nar/gkf436openalex-snapshot
MAFFT: a novel method for rapid multiple sequence alignment based on fast Fourier transform
inferredcites →https://doi.org/10.1093/nar/gkh073openalex-snapshot
Database resources of the National Center for Biotechnology Information: update
inferredcites →https://doi.org/10.1093/nar/gkr1006openalex-snapshot
The International Nucleotide Sequence Database Collaboration
inferredcites →https://doi.org/10.1093/nar/gkt382openalex-snapshot
IgBLAST: an immunoglobulin variable domain sequence analysis tool
inferredcites →https://doi.org/10.1093/nar/gkv1189openalex-snapshot
Reference sequence (RefSeq) database at NCBI: current status, taxonomic expansion, and functional annotation
inferredcites →https://doi.org/10.1093/nar/gkv1226openalex-snapshot
Assembly: a resource for assembled genomes at NCBI
inferredcites →https://doi.org/10.1093/nar/gkv951openalex-snapshot
PubChem Substance and Compound databases
inferredcites →https://doi.org/10.1093/nar/gkw1065openalex-snapshot
Virus Variation Resource – improved response to emergent viral outbreaks
inferredcites →https://doi.org/10.1093/nar/gkw569openalex-snapshot
NCBI prokaryotic genome annotation pipeline
inferredcites →https://doi.org/10.1093/nar/gkx1068openalex-snapshot
RefSeq: an update on prokaryotic genome annotation and curation
inferredcites →https://doi.org/10.1093/nar/gkx1097openalex-snapshot
The international nucleotide sequence database collaboration
inferredcites →https://doi.org/10.1093/nar/gky1002openalex-snapshot
DDBJ update: the Genomic Expression Archive (GEA) for functional genomics data
inferredcites →https://doi.org/10.1093/nar/gky1033openalex-snapshot
PubChem 2019 update: improved access to chemical data
inferredcites →https://doi.org/10.1093/nar/gky1069openalex-snapshot
Database resources of the National Center for Biotechnology Information
inferredcites →https://doi.org/10.1093/nar/gky1078openalex-snapshot
The European Nucleotide Archive in 2018
inferredcites →https://doi.org/10.1186/1471-2105-10-421openalex-snapshot
BLAST+: architecture and applications
inferredcites →https://doi.org/10.1186/1471-2105-13-134openalex-snapshot
Primer-BLAST: A tool to design target-specific primers for polymerase chain reaction
inferredcites →https://doi.org/10.1186/1471-2105-6-298openalex-snapshot
Kalign – an accurate and fast multiple sequence alignment algorithm
inferredcites →https://doi.org/10.1186/s13321-019-0375-2openalex-snapshot
PUG-View: programmatic access to chemical annotations integrated in PubChem
inferredcites →https://doi.org/10.1371/journal.pbio.2005343openalex-snapshot
Best Match: New relevance search for PubMed
What points at this work
Incoming claims: where this work appears in other papers’ reference lists and arguments.
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Strategic Computational Design of siRNA Molecules Targeting Structural Genes of SARS-CoV-2
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Gene and Protein Informatics
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The Neglected Role of Heterotrophic Protists in Engineered Water Systems
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Discovery and Biosynthesis of Pepticinnamins G–M Featuring Three Enzymes-Catalyzed Nonproteinogenic Amino Acid Formation
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Evolutionary and structural analysis of SARS-CoV-2 specific evasion of host immunity
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Lipo-chitooligosaccharides as regulatory signals of fungal growth and development
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Analysis of metagenome-assembled viral genomes from the human gut reveals diverse putative CrAss-like phages with unique genomic features
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A cytochrome P450 CYP87A4 imparts sterol side-chain cleavage in digoxin biosynthesis
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Empathi: embedding-based phage protein annotation tool by hierarchical assignment
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Arms races between selfish genetic elements and their host defence in termites
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K-MARVEL: K-Mer-based antimicrobial resistance virtual exploration lab
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Representation and participation across 20 years of plant genome sequencing
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Clinical variant interpretation and biologically relevant reference transcripts
inferred← citeshttps://doi.org/10.1038/s41564-021-00888-xopenalex-snapshot
Fungal taxonomy and sequence-based nomenclature
inferred← citeshttps://doi.org/10.1038/s41587-020-00774-7openalex-snapshot
CheckV assesses the quality and completeness of metagenome-assembled viral genomes
inferred← citeshttps://doi.org/10.1038/s41596-020-00444-7openalex-snapshot
High-throughput cultivation and identification of bacteria from the plant root microbiota
inferred← citeshttps://doi.org/10.1038/s41597-022-01886-2openalex-snapshot
Brain Data Standards - A method for building data-driven cell-type ontologies
inferred← citeshttps://doi.org/10.1038/s41597-026-07281-5openalex-snapshot
A complete catalogue of human-infective RNA viruses
inferred← citeshttps://doi.org/10.1038/s41598-020-60060-zopenalex-snapshot
Antifreeze protein complements cryoprotective dehydration in the freeze-avoiding springtail Megaphorura arctica
inferred← citeshttps://doi.org/10.1038/s41598-021-04505-zopenalex-snapshot
Automated prediction of the clinical impact of structural copy number variations
inferred← citeshttps://doi.org/10.1038/s41598-021-83737-5openalex-snapshot
Prioritizing antiviral drugs against SARS-CoV-2 by integrating viral complete genome sequences and drug chemical structures
inferred← citeshttps://doi.org/10.1038/s41598-021-85837-8openalex-snapshot
A 37-amino acid loop in the Yarrowia lipolytica hexokinase impacts its activity and affinity and modulates gene expression
inferred← citeshttps://doi.org/10.1038/s41598-021-95321-yopenalex-snapshot
“Guilt by association” is not competitive with genetic association for identifying autism risk genes
inferred← citeshttps://doi.org/10.1038/s41598-022-12446-4openalex-snapshot
Origin of an antifreeze protein gene in response to Cenozoic climate change
inferred← citeshttps://doi.org/10.1038/s41598-023-29134-6openalex-snapshot
Co-cultivation of Mortierellaceae with Pseudomonas helmanticensis affects both their growth and volatilome
inferred← citeshttps://doi.org/10.1038/s41598-023-40914-yopenalex-snapshot
Transcriptome characterization of gonadal sex differentiation in Pacific bluefin tuna, Thunnus orientalis (Temminck et Schlegel)
inferred← citeshttps://doi.org/10.1038/s41598-023-50398-5openalex-snapshot
Genetic diversity and population differentiation in Earliella scabrosa, a pantropical species of Polyporales
inferred← citeshttps://doi.org/10.1038/s41598-024-60627-0openalex-snapshot
Enhancing effect of natural adjuvant, panduratin A, on antibacterial activity of colistin against multidrug-resistant Acinetobacter baumannii
inferred← citeshttps://doi.org/10.1038/s41598-024-74267-xopenalex-snapshot
Altered expression pattern of immune response-related genes and isoforms in hypersensitivity pneumonitis lung fibroblasts
inferred← citeshttps://doi.org/10.1038/s41598-026-39612-2openalex-snapshot
Uncovering genetic variation in humoral inborn errors of immunity in African populations: insights from the African genome variation database
inferred← citeshttps://doi.org/10.1038/s42003-021-02925-1openalex-snapshot
Co-option of an extracellular protease for transcriptional control of nutrient degradation in the fungus Aspergillus nidulans
inferred← citeshttps://doi.org/10.1038/s43705-022-00102-xopenalex-snapshot
Bifidobacterium castoris strains isolated from wild mice show evidence of frequent host switching and diverse carbohydrate metabolism potential
inferred← citeshttps://doi.org/10.1038/s44259-025-00083-6openalex-snapshot
Aspergillus fumigatus mitogenomes and their influence on azole-resistant and -susceptible populations
inferred← citeshttps://doi.org/10.1039/d0ra10322eopenalex-snapshot
MeFSAT: a curated natural product database specific to secondary metabolites of medicinal fungi
inferred← citeshttps://doi.org/10.1039/d2ew00524gopenalex-snapshot
Emerging investigator series: environment-specific auxiliary substrates tailored for effective cometabolic bioremediation of 1,4-dioxane
inferred← citeshttps://doi.org/10.1051/limn/2025009openalex-snapshot
Assigning taxonomy and traits to DNA sequences of river diatoms in a region with limited taxonomic knowledge using the updated and annotated reference library Diat.barcode
inferred← citeshttps://doi.org/10.1073/pnas.2005868117openalex-snapshot
A long noncoding RNA, LncMyoD , modulates chromatin accessibility to regulate muscle stem cell myogenic lineage progression
inferred← citeshttps://doi.org/10.1080/07391102.2020.1794973openalex-snapshot
The latitude hypothesis, vitamin D, and SARS-Co-V2
inferred← citeshttps://doi.org/10.1080/07391102.2021.1947895openalex-snapshot
Computational studies on phylogeny and drug designing using molecular simulations for COVID-19
inferred← citeshttps://doi.org/10.1080/07420528.2024.2348016openalex-snapshot
Variants in the circadian clock genes PER2 and PER3 associate with familial sleep phase disorders
inferred← citeshttps://doi.org/10.1080/19490976.2024.2333483openalex-snapshot
Transplant of microbiota from Crohn’s disease patients to germ-free mice results in colitis
inferred← citeshttps://doi.org/10.1084/jem.20201503openalex-snapshot
NK/ILC1 cells mediate neuroinflammation and brain pathology following congenital CMV infection
inferred← citeshttps://doi.org/10.1089/big.2020.0383openalex-snapshot
A Survey of Biological Data in a Big Data Perspective
inferred← citeshttps://doi.org/10.1093/bib/bbab024openalex-snapshot
Advances in bulk and single-cell multi-omics approaches for systems biology and precision medicine
inferred← citeshttps://doi.org/10.1093/bib/bbab253openalex-snapshot
Defining the functional divergence of orthologous genes between human and mouse in the context of miRNA regulation
inferred← citeshttps://doi.org/10.1093/bib/bbab313openalex-snapshot
A genomic data resource for predicting antimicrobial resistance from laboratory-derived antimicrobial susceptibility phenotypes
inferred← citeshttps://doi.org/10.1093/bib/bbac438openalex-snapshot
AgingBank: a manually curated knowledgebase and high-throughput analysis platform that provides experimentally supported multi-omics data relevant to aging in multiple species
inferred← citeshttps://doi.org/10.1093/bioinformatics/btaa1027openalex-snapshot
Collecting and managing taxonomic data with NCBI-taxonomist
inferred← citeshttps://doi.org/10.1093/bioinformatics/btaa659openalex-snapshot
Gene Teller: an extensible Alexa Skill for gene-relevant databases
inferred← citeshttps://doi.org/10.1093/bioinformatics/btaa837openalex-snapshot
BERTMeSH: deep contextual representation learning for large-scale high-performance MeSH indexing with full text
inferred← citeshttps://doi.org/10.1093/bioinformatics/btab070openalex-snapshot
Viral Host Range database, an online tool for recording, analyzing and disseminating virus–host interactions
inferred← citeshttps://doi.org/10.1093/bioinformatics/btab703openalex-snapshot
MCRL: using a reference library to compress a metagenome into a non-redundant list of sequences, considering viruses as a case study
inferred← citeshttps://doi.org/10.1093/database/baaa037openalex-snapshot
Automated generation of gene summaries at the Alliance of Genome Resources
inferred← citeshttps://doi.org/10.1093/database/baaa055openalex-snapshot
CNSA: a data repository for archiving omics data
inferred← citeshttps://doi.org/10.1093/database/baaa062openalex-snapshot
NCBI Taxonomy: a comprehensive update on curation, resources and tools
inferred← citeshttps://doi.org/10.1093/database/baaa063openalex-snapshot
SPDB: a specialized database and web-based analysis platform for swine pathogens
inferred← citeshttps://doi.org/10.1093/database/baaa070openalex-snapshot
A database resource and online analysis tools for coronaviruses on a historical and global scale
inferred← citeshttps://doi.org/10.1093/database/baaa092openalex-snapshot
VarStack: a web tool for data retrieval to interpret somatic variants in cancer
inferred← citeshttps://doi.org/10.1093/database/baab029openalex-snapshot
Application of beta and gamma carbonic anhydrase sequences as tools for identification of bacterial contamination in the whole genome sequence of inbred Wuzhishan minipig (Sus scrofa) annotated in databases
inferred← citeshttps://doi.org/10.1093/database/baac006openalex-snapshot
Rapid automated validation, annotation and publication of SARS-CoV-2 sequences to GenBank
inferred← citeshttps://doi.org/10.1093/database/baad035openalex-snapshot
sc BrainMap: a landscape for cell types and associated genetic markers in the brain
inferred← citeshttps://doi.org/10.1093/femsec/fiab127openalex-snapshot
Microbial characterisation and Cold-Adapted Predicted Protein (CAPP) database construction from the active layer of Greenland's permafrost
inferred← citeshttps://doi.org/10.1093/femsre/fuac031openalex-snapshot
Genomics and pathotypes of the many faces of Escherichia coli
inferred← citeshttps://doi.org/10.1093/femsyr/foag033openalex-snapshot
De novo genome assembly of a native Saccharomyces cerevisiae strain isolated from spontaneous fermentation of vineyard must in the Atacama Desert (Chile)
inferred← citeshttps://doi.org/10.1093/g3journal/jkab311openalex-snapshot
Genome and transcriptome analysis of the beet armyworm Spodoptera exigua reveals targets for pest control
inferred← citeshttps://doi.org/10.1093/gbe/evab003openalex-snapshot
Phage Origin of Mitochondrion-Localized Family A DNA Polymerases in Kinetoplastids and Diplonemids
inferred← citeshttps://doi.org/10.1093/gbe/evab043openalex-snapshot
Utilization of Cobalamin Is Ubiquitous in Early-Branching Fungal Phyla
inferred← citeshttps://doi.org/10.1093/gbe/evab256openalex-snapshot
Ubiquity and Origins of Structural Maintenance of Chromosomes (SMC) Proteins in Eukaryotes
inferred← citeshttps://doi.org/10.1093/gbe/evab283openalex-snapshot
Expanding the Menu: Are Polyphagy and Gene Family Expansions Linked across Lepidoptera?
inferred← citeshttps://doi.org/10.1093/genetics/iyad031openalex-snapshot
The Gene Ontology knowledgebase in 2023
inferred← citeshttps://doi.org/10.1093/gigascience/giaa163openalex-snapshot
Transcriptome annotation in the cloud: complexity, best practices, and cost
inferred← citeshttps://doi.org/10.1093/gpbjnl/qzaf033openalex-snapshot
TRAIT: A Comprehensive Database for T-cell Receptor–antigen Interactions
inferred← citeshttps://doi.org/10.1093/icesjms/fsaf017openalex-snapshot
Pathways for converting zooplankton traits to ecological insights are paved with findable, accessible, interoperable, and reusable (FAIR) data practices
inferred← citeshttps://doi.org/10.1093/molbev/msaa324openalex-snapshot
Repeated Evolution of Inactive Pseudonucleases in a Fungal Branch of the Dis3/RNase II Family of Nucleases
inferred← citeshttps://doi.org/10.1093/molbev/msab165openalex-snapshot
AniProtDB: A Collection of Consistently Generated Metazoan Proteomes for Comparative Genomics Studies
inferred← citeshttps://doi.org/10.1093/nar/gkaa1030openalex-snapshot
Building a tRNA thermometer to estimate microbial adaptation to temperature
inferred← citeshttps://doi.org/10.1093/nar/gkaa1076openalex-snapshot
EVLncRNAs 2.0: an updated database of manually curated functional long non-coding RNAs validated by low-throughput experiments
inferred← citeshttps://doi.org/10.1093/nar/gkaa1100openalex-snapshot
UniProt: the universal protein knowledgebase in 2021
inferred← citeshttps://doi.org/10.1093/nar/gkaa1102openalex-snapshot
Discovery and characterization of a fourth class of guanidine riboswitches
inferred← citeshttps://doi.org/10.1093/nar/gkaa755openalex-snapshot
INTEDE: interactome of drug-metabolizing enzymes
inferred← citeshttps://doi.org/10.1093/nar/gkaa778openalex-snapshot
Animal-APAdb: a comprehensive animal alternative polyadenylation database
inferred← citeshttps://doi.org/10.1093/nar/gkaa839openalex-snapshot
SilencerDB: a comprehensive database of silencers
inferred← citeshttps://doi.org/10.1093/nar/gkaa851openalex-snapshot
GIMICA: host genetic and immune factors shaping human microbiota
inferred← citeshttps://doi.org/10.1093/nar/gkaa892openalex-snapshot
Database resources of the National Center for Biotechnology Information
inferred← citeshttps://doi.org/10.1093/nar/gkaa899openalex-snapshot
BastionHub: a universal platform for integrating and analyzing substrates secreted by Gram-negative bacteria
inferred← citeshttps://doi.org/10.1093/nar/gkaa924openalex-snapshot
MASI: microbiota—active substance interactions database
inferred← citeshttps://doi.org/10.1093/nar/gkaa951openalex-snapshot
AcrHub: an integrative hub for investigating, predicting and mapping anti-CRISPR proteins
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