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Historical Biogeography Using Species Geographical Ranges

https://doi.org/10.1093/sysbio/syv057
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What this work says

Outgoing claims: the papers this work cites, builds on, or argues with.

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Modern Phylogenetic Comparative Methods and Their Application in Evolutionary Biology
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The Late Miocene paleogeography of the Amazon Basin and the evolution of the Amazon River system
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Drainage reversal of the Amazon River due to the coupling of surface and lithospheric processes
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A phylogenetic comparative method for studying multivariate adaptation
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The Pan-Amazonian Ucayali Peneplain, late Neogene sedimentation in Amazonia, and the birth of the modern Amazon River system
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Historical biogeography, ecology and species richness
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Estimating diversification rates from phylogenetic information
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Approximate Bayesian Computation (ABC) in practice
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Three roads diverged? Routes to phylogeographic inference
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Paraphyly of Cinclodes fuscus (Aves: Passeriformes: Furnariidae): Implications for taxonomy and biogeography
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Universal species–area and endemics–area relationships at continental scales
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The global diversity of birds in space and time
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The drivers of tropical speciation
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The incomplete natural history of mitochondria
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Between Two Extremes: Mitochondrial DNA is neither the Panacea nor the Nemesis of Phylogenetic and Taxonomic Inference
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A Likelihood Framework for Estimating Phylogeographic History on a Continuous Landscape
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Phylogenies and the Comparative Method
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Phylogenetic Comparative Analysis: A Modeling Approach for Adaptive Evolution
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Niche Conservatism Drives Elevational Diversity Patterns in Appalachian Salamanders
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APE: Analyses of Phylogenetics and Evolution in R language
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SPREAD: spatial phylogenetic reconstruction of evolutionary dynamics
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Procedures for the Analysis of Comparative Data Using Phylogenetically Independent Contrasts
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Phylogenetic Inference of Reciprocal Effects between Geographic Range Evolution and Diversification
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Bayesian Analysis of Biogeography when the Number of Areas is Large
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On the Biogeography of Centipeda: A Species-Tree Diffusion Approach
inferredcites →https://doi.org/10.1093/sysbio/syu056openalex-snapshot
Model Selection in Historical Biogeography Reveals that Founder-Event Speciation Is a Crucial Process in Island Clades
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Climatic zonation drives latitudinal variation in speciation mechanisms
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A palaeobiogeographic model for biotic diversification within Amazonia over the past three million years
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The reconstructed evolutionary process
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Rates of projected climate change dramatically exceed past rates of climatic niche evolution among vertebrate species
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Explaining Andean megadiversity: the evolutionary and ecological causes of glassfrog elevational richness patterns
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Phylogenetic approaches for studying diversification
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INTEGRATING PHYLOGENETICS AND ENVIRONMENTAL NICHE MODELS TO EXPLORE SPECIATION MECHANISMS IN DENDROBATID FROGS
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A LIKELIHOOD FRAMEWORK FOR INFERRING THE EVOLUTION OF GEOGRAPHIC RANGE ON PHYLOGENETIC TREES
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Dispersal to or from an African biodiversity hotspot?
inferredcites →https://doi.org/10.1111/j.1365-294x.2009.04515.xopenalex-snapshot
In defence of model-based inference in phylogeography
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Multiple Pleistocene refugia and Holocene range expansion of an abundant southwestern American desert plant species (Melampodium leucanthum, Asteraceae)
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Extensive range persistence in peripheral and interior refugia characterizes Pleistocene range dynamics in a widespread Alpine plant species (Senecio carniolicus, Asteraceae)
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SPECIATION AND ITS CONSEQUENCES
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ESTIMATION OF SINGLE GENERATION MIGRATION DISTANCES FROM GEOGRAPHIC VARIATION IN ANIMAL MITOCHONDRIAL DNA
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LIKELIHOOD OF ANCESTOR STATES IN ADAPTIVE RADIATION
inferredcites →https://doi.org/10.1111/j.1558-5646.2011.01374.xopenalex-snapshot
LINEAGE DIVERSIFICATION AND MORPHOLOGICAL EVOLUTION IN A LARGE-SCALE CONTINENTAL RADIATION: THE NEOTROPICAL OVENBIRDS AND WOODCREEPERS (AVES: FURNARIIDAE)
inferredcites →https://doi.org/10.1111/j.2041-210x.2010.00044.xopenalex-snapshot
Phylogenetic signal and linear regression on species data
inferredcites →https://doi.org/10.1111/jbi.12346openalex-snapshot
Into and out of the tropics: the generation of the latitudinal gradient among New World passerine birds
inferredcites →https://doi.org/10.1111/mec.12369openalex-snapshot
Quaternary range and demographic expansion of L iolaemus darwinii ( S quamata: L iolaemidae) in the M onte D esert of C entral A rgentina using B ayesian phylogeography and ecological niche modelling
inferredcites →https://doi.org/10.1126/science.1072779openalex-snapshot
Geographic Range Size and Determinants of Avian Species Richness
inferredcites →https://doi.org/10.1126/science.1130880openalex-snapshot
Out of the Tropics: Evolutionary Dynamics of the Latitudinal Diversity Gradient
inferredcites →https://doi.org/10.1126/science.1194585openalex-snapshot
Amazonia Through Time: Andean Uplift, Climate Change, Landscape Evolution, and Biodiversity
inferredcites →https://doi.org/10.1126/science.1219669openalex-snapshot
Mapping the Origins and Expansion of the Indo-European Language Family
inferredcites →https://doi.org/10.1130/g25567a.1openalex-snapshot
Late Miocene onset of the Amazon River and the Amazon deep-sea fan: Evidence from the Foz do Amazonas Basin
inferredcites →https://doi.org/10.1130/spe190openalex-snapshot
Geological Implications of Impacts of Large Asteroids and Comets on the Earth
inferredcites →https://doi.org/10.1146/annurev-ecolsys-102209-144710openalex-snapshot
Phylogenetic Methods in Biogeography
inferredcites →https://doi.org/10.1146/annurev.ecolsys.37.091305.110035openalex-snapshot
Birth-Death Models in Macroevolution
inferredcites →https://doi.org/10.1146/annurev.es.18.110187.002421openalex-snapshot
INTRASPECIFIC PHYLOGEOGRAPHY: The Mitochondrial DNA Bridge Between Population Genetics and Systematics
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BEAST: Bayesian evolutionary analysis by sampling trees
inferredcites →https://doi.org/10.1214/14-aoas743openalex-snapshot
Power-law models for infectious disease spread
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SYSTEMATICS, EVOLUTION, AND BIOGEOGRAPHY OF THE SOUTH AMERICAN OVENBIRD GENUS CINCLODES
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Handbook of Mathematical Functions with Formulas, Graphs, and Mathematical Tables
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Estimation of Single Generation Migration Distances from Geographic Variation in Animal Mitochondrial DNA
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Power-law models for infectious disease spread
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Modern phylogenetic comparative methods and their application in evolutionary biology: concepts and practice
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The distribution of bird-life in Colombia; a contribution to a biological survey of South America
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Phylogeography by diffusion on a sphere: whole world phylogeography

What points at this work

Incoming claims: where this work appears in other papers’ reference lists and arguments.

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Systematics and biogeography of the genus Scaria Bolívar, 1887 (Orthoptera: Tetrigidae: Batrachideinae)
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Diversity, Endemism, and Evolutionary History of Montane Biotas Outside the Andean Region
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Mountain radiations are not only rapid and recent: Ancient diversification of South American frog and lizard families related to Paleogene Andean orogeny and Cenozoic climate variations
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Next-generation cophylogeny: unravelling eco-evolutionary processes
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Modelling the tempo and mode of lineage dispersal
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Dinosaurs reveal the geographical signature of an evolutionary radiation
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Global patterns and drivers of tree diversity integrated across a continuum of spatial grains
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inferred← citeshttps://doi.org/10.1093/evolut/qpaf173openalex-snapshot
SBEARS—a site-based method to estimate ancestral ranges of species
inferred← citeshttps://doi.org/10.1093/molbev/msae250openalex-snapshot
Saltational Episodes of Reticulate Evolution in the Drosophila saltans Species Group
inferred← citeshttps://doi.org/10.1093/sysbio/syaa031openalex-snapshot
Complex Ecological Phenotypes on Phylogenetic Trees: A Markov Process Model for Comparative Analysis of Multivariate Count Data
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Phylogenomics of Monitor Lizards and the Role of Competition in Dictating Body Size Disparity
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A Comprehensive Approach to Detect Hybridization Sheds Light on the Evolution of Earth’s Largest Lizards
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Understanding Species Boundaries that Arise from Complex Histories: Gene Flow Across the Speciation Continuum in the Spotted Whiptail Lizards
inferred← citeshttps://doi.org/10.1093/sysbio/syae051openalex-snapshot
Phylogenetic Biogeography Inference Using Dynamic Paleogeography Models and Explicit Geographic Ranges
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An Evolving View of Phylogenetic Biogeography
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A unifying comparative phylogenetic framework including traits coevolving across interacting lineages
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Early Arrival and Climatically-Linked Geographic Expansion of New World Monkeys from Tiny African Ancestors
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Interdependent Phenotypic and Biogeographic Evolution Driven by Biotic Interactions
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New insights into the phylogenetic position and palaeobiogeography of Konkasaurus mahalana (Squamata: Scincoidea) from the Late Cretaceous of Madagascar
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Miocene biome turnover drove conservative body size evolution across Australian vertebrates
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Complex ecological phenotypes on phylogenetic trees: a hidden Markov model for comparative analysis of multivariate count data
inferred← citeshttps://doi.org/10.1111/cla.70040openalex-snapshot
Reconstructing the global radiation of Turdidae (Aves: Passeriformes) using explicit geographic ranges under two different palaeogeographic scenarios
inferred← citeshttps://doi.org/10.1111/ecog.04102openalex-snapshot
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inferred← citeshttps://doi.org/10.1111/evo.14183openalex-snapshot
Male‐biased sexual selection, but not sexual dichromatism, predicts speciation in birds
inferred← citeshttps://doi.org/10.1111/evo.14561openalex-snapshot
Bridging macroecology and macroevolution in the radiation of sigmodontine rodents
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From the Namib around the world: biogeography of the Inuleae–Plucheinae (Asteraceae)
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An event model for phylogenetic biogeography using explicitly geographical ranges
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Phylogeography, population genetics and distribution modelling reveal vulnerability of Scirpus longii (Cyperaceae) and the Atlantic Coastal Plain Flora to climate change
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polyCub: An R package for Integration over Polygons
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Biogeography Meets Niche Modeling: Inferring the Role of Deep Time Climate Change When Data Is Limited
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EMPIRE: The Ellipse Model for Phylogenetic Inference of Range Evolution
inferred← citeshttps://doi.org/10.7287/peerj.12533v0.1/reviews/1openalex-snapshot
Peer Review #1 of "Biogeographic evidence supports the Old Amazon hypothesis for the formation of the Amazon fluvial system (v0.1)"
inferred← citeshttps://doi.org/10.7287/peerj.12533v0.1/reviews/2openalex-snapshot
Peer Review #2 of "Biogeographic evidence supports the Old Amazon hypothesis for the formation of the Amazon fluvial system (v0.1)"
inferred← citeshttps://doi.org/10.7287/peerj.12533v0.2/reviews/1openalex-snapshot
Peer Review #1 of "Biogeographic evidence supports the Old Amazon hypothesis for the formation of the Amazon fluvial system (v0.2)"
inferred← citeshttps://doi.org/10.7287/peerj.12533v0.2/reviews/2openalex-snapshot
Peer Review #2 of "Biogeographic evidence supports the Old Amazon hypothesis for the formation of the Amazon fluvial system (v0.2)"
inferred← citeshttps://doi.org/10.7287/peerj.6399v0.1/reviews/1openalex-snapshot
Peer Review #1 of "Embracing heterogeneity: coalescing the Tree of Life and the future of phylogenomics (v0.1)"
inferred← citeshttps://doi.org/10.7287/peerj.6399v0.1/reviews/2openalex-snapshot
Peer Review #2 of "Embracing heterogeneity: coalescing the Tree of Life and the future of phylogenomics (v0.1)"
inferred← citeshttps://doi.org/10.7287/peerj.6399v0.1/reviews/3openalex-snapshot
Peer Review #3 of "Embracing heterogeneity: coalescing the Tree of Life and the future of phylogenomics (v0.1)"
inferred← citeshttps://doi.org/10.7287/peerj.6399v0.2/reviews/1openalex-snapshot
Peer Review #1 of "Embracing heterogeneity: coalescing the Tree of Life and the future of phylogenomics (v0.2)"
inferred← citeshttps://doi.org/10.7287/peerj.6399v0.2/reviews/3openalex-snapshot
Peer Review #3 of "Embracing heterogeneity: coalescing the Tree of Life and the future of phylogenomics (v0.2)"
inferred← citeshttps://doi.org/10.7717/peerj.12533openalex-snapshot
Biogeographic evidence supports the Old Amazon hypothesis for the formation of the Amazon fluvial system
inferred← citeshttps://doi.org/10.7717/peerj.14319openalex-snapshot
Systematics and diversification of the Ichthyomyini (Cricetidae, Sigmodontinae) revisited: evidence from molecular, morphological, and combined approaches
inferred← citeshttps://doi.org/10.7717/peerj.18903openalex-snapshot
Potential transoceanic dispersal of Geodia cf. papyracea and six new tetractinellid sponge species descriptions within the Hawaiian reef cryptofauna
inferred← citeshttps://doi.org/10.7717/peerj.5644openalex-snapshot
Conceptual and empirical advances in Neotropical biodiversity research
inferred← citeshttps://doi.org/10.7717/peerj.6399openalex-snapshot
Embracing heterogeneity: coalescing the Tree of Life and the future of phylogenomics
Editorial review for independent work. ICSAC — the Institute for Complexity Science and Advanced Computing — runs a structured editorial panel for researchers publishing outside journals, and publishes on CiteStamp rails. Submission is free and goes through ORCID: icsacinstitute.org/submit.