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Deferribacter abyssi sp. nov., an anaerobic thermophile from deep-sea hydrothermal vents of the Mid-Atlantic Ridge

https://doi.org/10.1099/ijs.0.02673-0
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What this work says

Outgoing claims: the papers this work cites, builds on, or argues with.

inferredcites →https://doi.org/10.1007/978-0-387-21609-6_26openalex-snapshot
Phylum BIX. Deferribacteres phy. nov.
inferredcites →https://doi.org/10.1007/978-1-4757-2191-1_22openalex-snapshot
The Genus Desulfuromonas and Other Gram-Negative Sulfur-Reducing Eubacteria
inferredcites →https://doi.org/10.1007/bf00247813openalex-snapshot
Desulfurella acetivorans gen. nov. and sp. nov. ?a new thermophilic sulfur-reducing eubacterium
inferredcites →https://doi.org/10.1007/bf00248898openalex-snapshot
Desulfurella multipotens sp. nov., a new sulfur-respiring thermophilic eubacterium from Raoul Island (Kermadec archipelago, New Zealand)
inferredcites →https://doi.org/10.1007/bf02046728openalex-snapshot
Sulphur metabolism in Thiorhodaceae I. Quantitative measurements on growing cells ofChromatium okenii
inferredcites →https://doi.org/10.1007/bf02293884openalex-snapshot
A Least Squares Algorithm for Fitting Additive Trees to Proximity Data
inferredcites →https://doi.org/10.1016/b978-1-4832-3211-9.50009-7openalex-snapshot
Evolution of Protein Molecules
inferredcites →https://doi.org/10.1016/s0021-9258(18)67912-8openalex-snapshot
Formation of Methane by Bacterial Extracts
inferredcites →https://doi.org/10.1093/nar/25.1.109openalex-snapshot
The RDP (Ribosomal Database Project)
inferredcites →https://doi.org/10.1093/nar/28.1.173openalex-snapshot
The RDP (Ribosomal Database Project) continues
inferredcites →https://doi.org/10.1093/nar/29.1.173openalex-snapshot
The RDP-II (Ribosomal Database Project)
inferredcites →https://doi.org/10.1099/00207713-45-4-649openalex-snapshot
Phylogenetic Analysis of the Genera Cellulomonas, Promicromonospora, and Jonesia and Proposal To Exclude the Genus Jonesia from the Family Cellulomonadaceae
inferredcites →https://doi.org/10.1099/00207713-47-2-505openalex-snapshot
Deferribacter thermophilus gen. nov., sp. nov., a Novel Thermophilic Manganese- and Iron-Reducing Bacterium Isolated from a Petroleum Reservoir
inferredcites →https://doi.org/10.1099/00207713-49-4-1471openalex-snapshot
Thermoanaerobacter siderophilus sp. nov., a novel dissimilatory Fe(III)-reducing, anaerobic, thermophilic bacterium
inferredcites →https://doi.org/10.1099/00207713-52-3-719openalex-snapshot
Geoglobus ahangari gen. nov., sp. nov., a novel hyperthermophilic archaeon capable of oxidizing organic acids and growing autotrophically on hydrogen with Fe(III) serving as the sole electron acceptor.
inferredcites →https://doi.org/10.1099/00207713-52-4-1317openalex-snapshot
Caminibacter hydrogeniphilus gen. nov., sp. nov., a novel thermophilic, hydrogen-oxidizing bacterium isolated from an East Pacific Rise hydrothermal vent.
inferredcites →https://doi.org/10.1099/00207713-52-4-1349openalex-snapshot
Persephonella marina gen. nov., sp. nov. and Persephonella guaymasensis sp. nov., two novel, thermophilic, hydrogen-oxidizing microaerophiles from deep-sea hydrothermal vents.
inferredcites →https://doi.org/10.1099/00207713-52-5-1859openalex-snapshot
Thermovibrio ruber gen. nov., sp. nov., an extremely thermophilic, chemolithoautotrophic, nitrate-reducing bacterium that forms a deep branch within the phylum Aquificae.
inferredcites →https://doi.org/10.1099/ijs.0.01953-0openalex-snapshot
Geoglobus ahangari gen. nov., sp. nov., a novel hyperthermophilic archaeon capable of oxidizing organic acids and growing autotrophically on hydrogen with Fe(III) serving as the sole electron acceptor
inferredcites →https://doi.org/10.1099/ijs.0.02195-0openalex-snapshot
Caminibacter hydrogeniphilus gen. nov., sp. nov., a novel thermophilic, hydrogen-oxidizing bacterium isolated from an East Pacific Rise hydrothermal vent
inferredcites →https://doi.org/10.1099/ijs.0.02367-0openalex-snapshot
Oceanithermus profundus gen. nov., sp. nov., a thermophilic, microaerophilic, facultatively chemolithoheterotrophic bacterium from a deep-sea hydrothermal vent
inferredcites →https://doi.org/10.1099/ijs.0.02390-0openalex-snapshot
Caldithrix abyssi gen. nov., sp. nov., a nitrate-reducing, thermophilic, anaerobic bacterium isolated from a Mid-Atlantic Ridge hydrothermal vent, represents a novel bacterial lineage
inferredcites →https://doi.org/10.1099/ijs.0.02479-0openalex-snapshot
Deferribacter desulfuricans sp. nov., a novel sulfur-, nitrate- and arsenate-reducing thermophile isolated from a deep-sea hydrothermal vent
inferredcites →https://doi.org/10.1099/ijs.0.02579-0openalex-snapshot
Vulcanithermus mediatlanticus gen. nov., sp. nov., a novel member of the family Thermaceae from a deep-sea hot vent
inferredcites →https://doi.org/10.1111/j.1574-6941.2001.tb00844.xopenalex-snapshot
Evidence for the presence of thermophilic Fe(III)-reducing microorganisms in deep-sea hydrothermal vents at 13°N (East Pacific Rise)
inferredcites →https://doi.org/10.1128/aem.66.9.3798-3806.2000openalex-snapshot
Novel Bacterial and Archaeal Lineages from an In Situ Growth Chamber Deployed at a Mid-Atlantic Ridge Hydrothermal Vent
inferredcites →https://doi.org/10.1128/mr.43.2.260-296.1979openalex-snapshot
Methanogens: reevaluation of a unique biological group
inferredcites →https://doi.org/10.7326/0003-4819-111-5-448_7openalex-snapshot
Bergey's Manual of Systematic Bacteriology

What points at this work

Incoming claims: where this work appears in other papers’ reference lists and arguments.

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13 Microbiology of Deep-Sea Hydrothermal Vents: Lessons for Mars Exploration
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The Phylum Deferribacteres and the Genus Caldithrix
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Recent developments in the thermophilic microbiology of deep-sea hydrothermal vents
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Thermincola ferriacetica sp. nov., a new anaerobic, thermophilic, facultatively chemolithoautotrophic bacterium capable of dissimilatory Fe(III) reduction
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Continuous enrichment cultures: insights into prokaryotic diversity and metabolic interactions in deep-sea vent chimneys
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Effect of variation of environmental conditions on the microbial communities of deep-sea vent chimneys, cultured in a bioreactor
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Desulfovulcanus ferrireducens gen. nov., sp. nov., a thermophilic autotrophic iron and sulfate-reducing bacterium from subseafloor basalt that grows on akaganéite and lepidocrocite minerals
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Challenges and distortions in microbial community analysis of oil reservoirs: a case study with heavy crude oil from the Romashkino field
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Identity and hydrocarbon degradation activity of enriched microorganisms from natural oil and asphalt seeps in the Kurdistan Region of Iraq (KRI)
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Thermophilic Microbial Metal Reduction
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Metal-tolerant thermophiles: metals as electron donors and acceptors, toxicity, tolerance and industrial applications
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Characterization of Fe(III)-Reducing Enrichment Cultures and Isolation of Enterobacter sp. Nan-1 from the Deep-Sea Sediment, South China Sea
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Microorganisms from deep-sea hydrothermal vents
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Dynamic variations of oil components and microbial communities during indigenous microbial stimulation pilot study in low-permeability reservoirs
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Effects of mercury addition on microbial community composition and nitrate removal inside permeable reactive barriers
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Goat milk fermented with combined lactic acid bacterium alter microbial community structures and levels of the targeted short-chain fatty acids in the large intestine of mice
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Thermodynamic constraints on hydrogen generation during serpentinization of ultramafic rocks
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Effect of iron redox transformations on arsenic solid-phase associations in an arsenic-rich, ferruginous hydrothermal sediment
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Microbiota and their affiliation with physiochemical characteristics of different subsurface petroleum reservoirs
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Seaward alteration of arsenic mobilization mechanisms based on fine-scale measurements in Pearl River estuarine sediments
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Bacterial communities and biogeochemical transformations of iron and sulfur in a high saltmarsh soil profile
inferred← citeshttps://doi.org/10.1016/j.syapm.2012.01.003openalex-snapshot
Succession of Deferribacteres and Epsilonproteobacteria through a nitrate-treated high-temperature oil production facility
inferred← citeshttps://doi.org/10.1016/s0065-2911(04)49005-5openalex-snapshot
Dissimilatory Fe(III) and Mn(IV) Reduction
inferred← citeshttps://doi.org/10.1016/s0580-9517(08)70006-0openalex-snapshot
3 The Isolation of Thermophiles from Deep-sea Hydrothermal Environments
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A Thermophilic Gram-Negative Nitrate-Reducing Bacterium, Calditerrivibrio nitroreducens, Exhibiting Electricity Generation Capability
inferred← citeshttps://doi.org/10.1023/b:mici.0000016360.21607.83openalex-snapshot
Thermophilic Microbial Communities of Deep-Sea Hydrothermal Vents
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Studies of Thermophilic Microorganisms at the Institute of Microbiology, Russian Academy of Sciences
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Iron’s irony: speciation, complexation & microbial processing of Fe in hydrothermal plumes
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Motile curved bacteria are Pareto-optimal
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Dissimilatory Iron [Fe(III)] Reduction by a Novel Fermentative, Piezophilic BacteriumAnoxybacter fermentansDY22613TIsolated from East Pacific Rise Hydrothermal Sulfides
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Microbial Community Composition in Crude Oils and Asphalts from the Kurdistan Region of Iraq
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Geochemical Constraints on Sources of Metabolic Energy for Chemolithoautotrophy in Ultramafic-Hosted Deep-Sea Hydrothermal Systems
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Bacterial Lifestyle in a Deep-sea Hydrothermal Vent Chimney Revealed by the Genome Sequence of the Thermophilic Bacterium Deferribacter desulfuricans SSM1
inferred← citeshttps://doi.org/10.1093/femsec/fiv101openalex-snapshot
Biogeographical distribution ofRimicaris exoculataresident gut epibiont communities along the Mid-Atlantic Ridge hydrothermal vent sites
inferred← citeshttps://doi.org/10.1093/femsle/fnw194openalex-snapshot
Cultivation of an immobilized (hyper)thermophilic marine microbial community in a bioreactor
inferred← citeshttps://doi.org/10.1093/femsre/fuac033openalex-snapshot
Limitations of microbial iron reduction under extreme conditions
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Caloranaerobacter ferrireducens sp. nov., an anaerobic, thermophilic, iron (III)-reducing bacterium isolated from deep-sea hydrothermal sulfide deposits
inferred← citeshttps://doi.org/10.1099/ijs.0.006767-0openalex-snapshot
Deferribacter autotrophicus sp. nov., an iron(III)-reducing bacterium from a deep-sea hydrothermal vent
inferred← citeshttps://doi.org/10.1099/ijs.0.011080-0openalex-snapshot
Geoglobus acetivorans sp. nov., an iron(III)-reducing archaeon from a deep-sea hydrothermal vent
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Deferrisoma camini gen. nov., sp. nov., a moderately thermophilic, dissimilatory iron(III)-reducing bacterium from a deep-sea hydrothermal vent that forms a distinct phylogenetic branch in the Deltaproteobacteria
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Seleniivibrio woodruffii gen. nov., sp. nov., a selenate- and arsenate-respiring bacterium in the Deferribacteraceae
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Calditerrivibrio nitroreducens gen. nov., sp. nov., a thermophilic, nitrate-reducing bacterium isolated from a terrestrial hot spring in Japan
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Deferrisoma palaeochoriense sp. nov., a thermophilic, iron(III)-reducing bacterium from a shallow-water hydrothermal vent in the Mediterranean Sea
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Petrothermobacter organivorans gen. nov., sp. nov., a thermophilic, strictly anaerobic bacterium of the phylum Deferribacteres isolated from a deep subsurface oil reservoir
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Phylogenomic and metabolic insights into iron reduction metabolism in the genus Deferribacter belonging to the order Deferribacterales
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Nitrate-driven dark oxygen production by diverse deep-sea microorganisms
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New insights into the energy metabolism and taxonomy of Deferribacteres revealed by the characterization of a new isolate from a hypersaline microbial mat
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An experimental and theoretical approach to determining linkages between geochemical variability and microbial biodiversity in seafloor hydrothermal chimneys
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Metatranscriptomic Evidence for Direct Interspecies Electron Transfer between Geobacter and Methanothrix Species in Methanogenic Rice Paddy Soils
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Prokaryotic Community Structure and Sulfate Reducer Activity in Water from High-Temperature Oil Reservoirs with and without Nitrate Treatment
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Culture-Dependent and -Independent Characterization of Microbial Communities Associated with a Shallow Submarine Hydrothermal System Occurring within a Coral Reef off Taketomi Island, Japan
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Microbial Ecology of the Dark Ocean above, at, and below the Seafloor
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Phylogenetic systematics of microorganisms inhabiting thermal environments
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A vida microbiana em um vulcão antártico: diversidade e adaptação procariótica na Ilha Deception.
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Gastrointestinal microbial community changes in Atlantic cod (Gadus morhua) exposed to crude oil
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Diversity of Thermophilic Anaerobes
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Investigation of Hydrogen Sulfide Production in a Polluted Estuary by Using a Vertical Column Simulator
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Investigation of bacterial communities within the digestive organs of the hydrothermal vent shrimp Rimicaris exoculata provide insights into holobiont geographic clustering
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Metabolic versatility and nitrate reduction pathways of a new thermophilic bacterium of the Deferrivibrionaceae: Deferrivibrio metallireducens sp. nov isolated from hot sediments of Vulcano Island, Italy
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Exemplar Abstract for Deferribacter abyssi Miroshnichenko et al. 2003.
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Nomenclature Abstract for Deferribacter abyssi Miroshnichenko et al. 2003.
inferred← citeshttps://doi.org/10.1601/tx.608openalex-snapshot
Taxonomic Abstract for the genera.
inferred← citeshttps://doi.org/10.1601/tx.610openalex-snapshot
Taxonomic Abstract for the species.
inferred← citeshttps://doi.org/10.21203/rs.3.rs-1584541/v1openalex-snapshot
A novel and dual digestive symbiosis scales up the nutrition and immune system of the holobiont Rimicaris exoculata
inferred← citeshttps://doi.org/10.2174/9789815080353122010015openalex-snapshot
Anaerobes
inferred← citeshttps://doi.org/10.22541/au.168253207.76189924/v1openalex-snapshot
Characterization of the microbiomes from Salton Sea Trough mud volcanoes, seeps, and enrichment cultures: predominance of H2-autotrophy, H2-producing organotrophy, acetate cycling, and sulfur reduction
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Microbiome Dynamics of a Polychlorobiphenyl (PCB) Historically Contaminated Marine Sediment under Conditions Promoting Reductive Dechlorination
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A Mosaic of Geothermal and Marine Features Shapes Microbial Community Structure on Deception Island Volcano, Antarctica
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Supplemental Plant Extracts From Flos lonicerae in Combination With Baikal skullcap Attenuate Intestinal Disruption and Modulate Gut Microbiota in Laying Hens Challenged by Salmonella pullorum
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Genomic evidence for the first symbiotic Deferribacterota, a novel gut symbiont from the deep-sea hydrothermal vent shrimp Rimicaris kairei
inferred← citeshttps://doi.org/10.3389/fmicb.2023.1272245openalex-snapshot
Fe(III) (oxyhydr)oxide reduction by the thermophilic iron-reducing bacterium Desulfovulcanus ferrireducens
inferred← citeshttps://doi.org/10.3390/genes10110849openalex-snapshot
Genomic Insights into the Carbon and Energy Metabolism of a Thermophilic Deep-Sea Bacterium Deferribacter autotrophicus Revealed New Metabolic Traits in the Phylum Deferribacteres
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Chemoautotrophy at Deep-Sea Vents: Past, Present, and Future
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Identification of appropriate sample and culture method for isolation of new thermophilic bacteria from hot spring
inferred← citeshttps://doi.org/10.70675/190dfcaez1a58z4592z8996zfe84822b493eopenalex-snapshot
Dynamique spatiale et temporelle des communautés mircrobiennes dans les édifices hydrothermaux actifs
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