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Rapid and spontaneous loss of phthiocerol dimycocerosate (PDIM) from Mycobacterium tuberculosis grown in vitro: implications for virulence studies

https://doi.org/10.1099/mic.0.029199-0
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What this work says

Outgoing claims: the papers this work cites, builds on, or argues with.

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Neutral-red reaction is related to virulence and cell wall methyl-branched lipids in Mycobacterium tuberculosis
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Dissecting the Mechanism and Assembly of a Complex Virulence Mycobacterial Lipid
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The dimycocerosate ester polyketide virulence factors of mycobacteria
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The Mycobacterium tuberculosis complex transcriptome of attenuation
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New use of BCG for recombinant vaccines
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Complex lipid determines tissue-specific replication of Mycobacterium tuberculosis in mice
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A glycolipid of hypervirulent tuberculosis strains that inhibits the innate immune response
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Identification of a virulence gene cluster of Mycobacterium tuberculosis by signature‐tagged transposon mutagenesis
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Disruption of msl3 abolishes the synthesis of mycolipanoic and mycolipenic acids required for polyacyltrehalose synthesis in Mycobacterium tuberculosis H37Rv and causes cell aggregation
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Genes required for mycobacterial growth defined by high density mutagenesis
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Production of phthiocerol dimycocerosates protects Mycobacterium tuberculosis from the cidal activity of reactive nitrogen intermediates produced by macrophages and modulates the early immune response to infection
inferredcites →https://doi.org/10.1073/pnas.0503272102openalex-snapshot
Genome-wide requirements for Mycobacterium tuberculosis adaptation and survival in macrophages
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Identification of a nitroimidazo-oxazine-specific protein involved in PA-824 resistance in Mycobacterium tuberculosis
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Regulation of the Mycobacterium tuberculosis hypoxic response gene encoding α-crystallin
inferredcites →https://doi.org/10.1073/pnas.2134250100openalex-snapshot
Genetic requirements for mycobacterial survival during infection
inferredcites →https://doi.org/10.1073/pnas.93.10.4787openalex-snapshot
Targeted replacement of the mycocerosic acid synthase gene in Mycobacterium bovis BCG produces a mutant that lacks mycosides.
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Restricted structural gene polymorphism in the Mycobacterium tuberculosis complex indicates evolutionarily recent global dissemination
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Efficient allelic exchange and transposon mutagenesis in Mycobacterium tuberculosis
inferredcites →https://doi.org/10.1074/jbc.272.27.16741openalex-snapshot
Gene Knockout Reveals a Novel Gene Cluster for the Synthesis of a Class of Cell Wall Lipids Unique to Pathogenic Mycobacteria
inferredcites →https://doi.org/10.1074/jbc.m100662200openalex-snapshot
Analysis of the Phthiocerol Dimycocerosate Locus ofMycobacterium tuberculosis
inferredcites →https://doi.org/10.1074/jbc.m306714200openalex-snapshot
A New Family of Type III Polyketide Synthases in Mycobacterium tuberculosis
inferredcites →https://doi.org/10.1074/jbc.m400324200openalex-snapshot
The Role of MmpL8 in Sulfatide Biogenesis and Virulence of Mycobacterium tuberculosis
inferredcites →https://doi.org/10.1084/jem.20041429openalex-snapshot
Mycobacterium tuberculosis pks12 Produces a Novel Polyketide Presented by CD1c to T Cells
inferredcites →https://doi.org/10.1084/jem.57.2.239openalex-snapshot
BIOLOGICAL STUDIES OF THE TUBERCLE BACILLUS
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BIOLOGICAL STUDIES OF THE TUBERCLE BACILLUS
inferredcites →https://doi.org/10.1093/nar/30.1.207openalex-snapshot
Gene Expression Omnibus: NCBI gene expression and hybridization array data repository
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The cell envelope structure and properties of Mycobacterium smegmatis mc2155: is there a clue for the unique transformability of the strain?
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Isolation and characterization of efficient plasmid transformation mutants of Mycobacterium smegmatis
inferredcites →https://doi.org/10.1111/j.1365-2958.2007.06078.xopenalex-snapshot
The resuscitation‐promoting factors of Mycobacterium tuberculosis are required for virulence and resuscitation from dormancy but are collectively dispensable for growth in vitro
inferredcites →https://doi.org/10.1111/j.1472-765x.2005.01659.xopenalex-snapshot
Inactivation of polyketide synthase and related genes results in the loss of complex lipids in Mycobacterium tuberculosis H37Rv
inferredcites →https://doi.org/10.1128/iai.71.7.3794-3801.2003openalex-snapshot
The Largest Open Reading Frame ( pks12 ) in the Mycobacterium tuberculosis Genome Is Involved in Pathogenesis and Dimycocerosyl Phthiocerol Synthesis
inferredcites →https://doi.org/10.1128/iai.73.6.3492-3501.2005openalex-snapshot
Contribution of theMycobacterium tuberculosisMmpL Protein Family to Virulence and Drug Resistance
inferredcites →https://doi.org/10.1128/iai.9.1.150-158.1974openalex-snapshot
Lipids of Putative Relevance to Virulence in Mycobacterium tuberculosis : Phthiocerol Dimycocerosate and the Attenuation Indicator Lipid
inferredcites →https://doi.org/10.1164/art.1950.62.1-2.22openalex-snapshot
Dissociation of the tubercle bacillus; a review.
inferredcites →https://doi.org/10.1186/1471-2334-7-84openalex-snapshot
Identification of gene targets against dormant phase Mycobacterium tuberculosis infections
inferredcites →https://doi.org/10.1371/journal.ppat.1000289openalex-snapshot
Phthiocerol Dimycocerosates of M. tuberculosis Participate in Macrophage Invasion by Inducing Changes in the Organization of Plasma Membrane Lipids
inferredcites →https://doi.org/10.1385/1-59259-147-7:229openalex-snapshot
Analysis of the Lipids of Mycobacterium tuberculosis
inferredcites →https://doi.org/10.4049/jimmunol.162.11.6740openalex-snapshot
Mycobacterium tuberculosis CDC1551 Induces a More Vigorous Host Response In Vivo and In Vitro, But Is Not More Virulent Than Other Clinical Isolates

What points at this work

Incoming claims: where this work appears in other papers’ reference lists and arguments.

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Loss of Lipid Virulence Factors Reduces the Efficacy of the BCG Vaccine
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The thick waxy coat of mycobacteria, a protective layer against antibiotics and the host's immune system
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Gluconeogenic carbon flow of tricarboxylic acid cycle intermediates is critical for Mycobacterium tuberculosis to establish and maintain infection
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Virulence hierarchies within the Mycobacterium tuberculosis complex
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Effect of serial subculturing on the genetic composition and cytotoxicactivity of Mycobacterium tuberculosis
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Roles for phthiocerol dimycocerosate lipids in Mycobacterium tuberculosis pathogenesis
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Disruption of the serine/threonine protein kinase H affects phthiocerol dimycocerosates synthesis in Mycobacterium tuberculosis
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Diversity of Mycobacterium tuberculosis across evolutionary scales
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PE/PPE proteins mediate nutrient transport across the outer membrane of Mycobacterium tuberculosis
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Pathophysiology and Immunology
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Mycobacterium tuberculosis Lacking All Mycolic Acid Cyclopropanation Is Viable but Highly Attenuated and Hyperinflammatory in Mice
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Spontaneous Phthiocerol Dimycocerosate-Deficient Variants of Mycobacterium tuberculosis Are Susceptible to Gamma Interferon-Mediated Immunity
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Protein kinase F regulates the virulence of Mycobacterium tuberculosis
inferred← citeshttps://doi.org/10.1128/iai.01340-13openalex-snapshot
Mycobacterium tuberculosis Strains Lacking Surface Lipid Phthiocerol Dimycocerosate Are Susceptible to Killing by an Early Innate Host Response
inferred← citeshttps://doi.org/10.1128/iai.01791-14openalex-snapshot
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inferred← citeshttps://doi.org/10.1128/iai.06370-11openalex-snapshot
Both Phthiocerol Dimycocerosates and Phenolic Glycolipids Are Required for Virulence of Mycobacterium marinum
inferred← citeshttps://doi.org/10.1128/jb.00166-10openalex-snapshot
Variation among Genome Sequences of H37Rv Strains of Mycobacterium tuberculosis from Multiple Laboratories
inferred← citeshttps://doi.org/10.1128/jb.00536-10openalex-snapshot
Massive Gene Duplication Event among Clinical Isolates of the Mycobacterium tuberculosis W/Beijing Family
inferred← citeshttps://doi.org/10.1128/jb.00696-16openalex-snapshot
Unique Regulation of the DosR Regulon in the Beijing Lineage of Mycobacterium tuberculosis
inferred← citeshttps://doi.org/10.1128/jb.00922-15openalex-snapshot
Iron Acquisition in Mycobacterium avium subsp. paratuberculosis
inferred← citeshttps://doi.org/10.1128/jb.01013-12openalex-snapshot
Upregulation of the Phthiocerol Dimycocerosate Biosynthetic Pathway by Rifampin-Resistant,rpoBMutant Mycobacterium tuberculosis
inferred← citeshttps://doi.org/10.1128/jb.01241-10openalex-snapshot
SigG Does Not Control Gene Expression in Response to DNA Damage in Mycobacterium tuberculosis H37Rv
inferred← citeshttps://doi.org/10.1128/jb.01597-09openalex-snapshot
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PPE64 is a mycomembrane channel protein that functions in heme iron uptake and moonlights in biofilm formation in Mycobacterium tuberculosis
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The lipid language of tuberculosis: Mycobacterium tuberculosis surface molecules in host interaction and drug resistance
inferred← citeshttps://doi.org/10.1128/mmbr.00062-18openalex-snapshot
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Diversification of gene content in the Mycobacterium tuberculosis complex is determined by phylogenetic and ecological signatures
inferred← citeshttps://doi.org/10.1128/spectrum.03224-24openalex-snapshot
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Letting SleepingdosLie: Does Dormancy Play a Role in Tuberculosis?
inferred← citeshttps://doi.org/10.1155/2024/6458900openalex-snapshot
Three-Dimensional Culture Modelling Reveals Divergent Mycobacterium tuberculosis Virulence and Antimicrobial Treatment Response
inferred← citeshttps://doi.org/10.1177/2472555217717639openalex-snapshot
Proteomics of Culture Filtrate of Prevalent Mycobacterium tuberculosis Strains: 2D-PAGE Map and MALDI-TOF/MS Analysis
inferred← citeshttps://doi.org/10.1186/1471-2105-14-303openalex-snapshot
A Hidden Markov Model for identifying essential and growth-defect regions in bacterial genomes from transposon insertion sequencing data
inferred← citeshttps://doi.org/10.1186/s12864-015-1889-2openalex-snapshot
Comparative genomics between human and animal associated subspecies of the Mycobacterium avium complex: a basis for pathogenicity
inferred← citeshttps://doi.org/10.1186/s12864-019-5482-yopenalex-snapshot
Genome analysis identifies a spontaneous nonsense mutation in ppsD leading to attenuation of virulence in laboratory-manipulated Mycobacterium tuberculosis
inferred← citeshttps://doi.org/10.1186/s12864-019-5791-1openalex-snapshot
Transposon libraries identify novel Mycobacterium bovis BCG genes involved in the dynamic interactions required for BCG to persist during in vivo passage in cattle
inferred← citeshttps://doi.org/10.1186/s12915-017-0471-6openalex-snapshot
Phthiocerol dimycocerosates promote access to the cytosol and intracellular burden of Mycobacterium tuberculosis in lymphatic endothelial cells
inferred← citeshttps://doi.org/10.1246/cl.160152openalex-snapshot
Total Synthesis of PDIM A
inferred← citeshttps://doi.org/10.1371/journal.pbio.3001906openalex-snapshot
The Mycobacterium tuberculosis PE15/PPE20 complex transports calcium across the outer membrane
inferred← citeshttps://doi.org/10.1371/journal.pgen.1005190openalex-snapshot
Essential Role of the ESX-5 Secretion System in Outer Membrane Permeability of Pathogenic Mycobacteria
inferred← citeshttps://doi.org/10.1371/journal.pone.0010289openalex-snapshot
The Impact of Mouse Passaging of Mycobacterium tuberculosis Strains prior to Virulence Testing in the Mouse and Guinea Pig Aerosol Models
inferred← citeshttps://doi.org/10.1371/journal.pone.0021126openalex-snapshot
Relevant Assay to Study the Adhesion of Plasmodium falciparum-Infected Erythrocytes to the Placental Epithelium
inferred← citeshttps://doi.org/10.1371/journal.pone.0023870openalex-snapshot
Mycobacterium tuberculosis Lineage Influences Innate Immune Response and Virulence and Is Associated with Distinct Cell Envelope Lipid Profiles
inferred← citeshttps://doi.org/10.1371/journal.pone.0041923openalex-snapshot
Mycobacterium tuberculosis Complex Lipid Virulence Factors Preserved in the 17,000-Year-Old Skeleton of an Extinct Bison, Bison antiquus
inferred← citeshttps://doi.org/10.1371/journal.pone.0062966openalex-snapshot
Drug Resistant Clinical Isolates of Mycobacterium tuberculosis from Different Genotypes Exhibit Differential Host Responses in THP-1 Cells
inferred← citeshttps://doi.org/10.1371/journal.pone.0133420openalex-snapshot
Chlamydia trachomatis In Vivo to In Vitro Transition Reveals Mechanisms of Phase Variation and Down-Regulation of Virulence Factors
inferred← citeshttps://doi.org/10.1371/journal.pone.0155127openalex-snapshot
High Persister Mutants in Mycobacterium tuberculosis
inferred← citeshttps://doi.org/10.1371/journal.pone.0179996openalex-snapshot
Whole transcriptomic and proteomic analyses of an isogenic M. tuberculosis clinical strain with a naturally occurring 15 Kb genomic deletion
inferred← citeshttps://doi.org/10.1371/journal.pone.0201146openalex-snapshot
Whole genome SNP analysis suggests unique virulence factor differences of the Beijing and Manila families of Mycobacterium tuberculosis found in Hawaii
inferred← citeshttps://doi.org/10.1371/journal.pone.0280294openalex-snapshot
The effect of in vitro consecutive passages and culture medium on the genetic variations in BCG Pasteur 1173P2 vaccine
inferred← citeshttps://doi.org/10.1371/journal.pone.0304876openalex-snapshot
Rv0100: An essential acyl carrier protein from M. tuberculosis important in dormancy
inferred← citeshttps://doi.org/10.1371/journal.ppat.1005010openalex-snapshot
Phosphorylation of the Peptidoglycan Synthase PonA1 Governs the Rate of Polar Elongation in Mycobacteria
inferred← citeshttps://doi.org/10.1371/journal.ppat.1005257openalex-snapshot
Diversity of Mycobacterium tuberculosis across Evolutionary Scales
inferred← citeshttps://doi.org/10.1371/journal.ppat.1014237openalex-snapshot
Encoded metabolic remodeling amplifies drug resistance in Mycobacterium tuberculosis
inferred← citeshttps://doi.org/10.21203/rs.3.rs-3911791/v1openalex-snapshot
M. orygis hypervirulence provides new insights into tuberculosis pathogenesis
inferred← citeshttps://doi.org/10.3109/10409238.2014.896859openalex-snapshot
Biosynthesis of mycobacterial lipids by polyketide synthases and beyond
inferred← citeshttps://doi.org/10.3389/fcimb.2020.00219openalex-snapshot
Whole Genome and Transcriptome Sequencing of Two Multi-Drug Resistant Mycobacterium tuberculosis Strains to Facilitate Illustrating Their Virulence in vivo
inferred← citeshttps://doi.org/10.3389/fcimb.2020.582416openalex-snapshot
Biological Profiling Enables Rapid Mechanistic Classification of Phenotypic Screening Hits and Identification of KatG Activation-Dependent Pyridine Carboxamide Prodrugs With Activity Against Mycobacterium tuberculosis
inferred← citeshttps://doi.org/10.3389/fcimb.2022.997283openalex-snapshot
Unraveling the mechanisms of intrinsic drug resistance in Mycobacterium tuberculosis
inferred← citeshttps://doi.org/10.3389/fgene.2019.00477openalex-snapshot
Effects of Host, Sample, and in vitro Culture on Genomic Diversity of Pathogenic Mycobacteria
inferred← citeshttps://doi.org/10.3389/fimmu.2024.1427510openalex-snapshot
The chosen few: Mycobacterium tuberculosis isolates for IMPAc-TB
inferred← citeshttps://doi.org/10.3389/fmicb.2020.550760openalex-snapshot
Lineage-Specific Proteomic Signatures in the Mycobacterium tuberculosis Complex Reveal Differential Abundance of Proteins Involved in Virulence, DNA Repair, CRISPR-Cas, Bioenergetics and Lipid Metabolism
inferred← citeshttps://doi.org/10.3389/fmicb.2022.937970openalex-snapshot
HupB, a nucleoid-associated protein, is critical for survival of Mycobacterium tuberculosis under host-mediated stresses and for enhanced tolerance to key first-line antibiotics
inferred← citeshttps://doi.org/10.3389/fmicb.2022.956602openalex-snapshot
Iron deprivation enhances transcriptional responses to in vitro growth arrest of Mycobacterium tuberculosis
inferred← citeshttps://doi.org/10.3390/antibiotics10050500openalex-snapshot
Pan and Core Genome Analysis of 183 Mycobacterium tuberculosis Strains Revealed a High Inter-Species Diversity among the Human Adapted Strains
inferred← citeshttps://doi.org/10.3390/bios12010029openalex-snapshot
Tween 80 Improves the Acid-Fast Bacilli Quantification in the Magnetic Nanoparticle-Based Colorimetric Biosensing Assay (NCBA)
inferred← citeshttps://doi.org/10.3390/ijms21113985openalex-snapshot
Mycobacterial Virulence Factors: Surface-Exposed Lipids and Secreted Proteins
inferred← citeshttps://doi.org/10.3390/vaccines10010040openalex-snapshot
BCG Substrains Change Their Outermost Surface as a Function of Growth Media
inferred← citeshttps://doi.org/10.4155/fmc.10.216openalex-snapshot
The Mycobacterium Tuberculosis Cytochromes P450: Physiology, Biochemistry & Molecular Intervention
inferred← citeshttps://doi.org/10.4161/mge.23244openalex-snapshot
The low incidence of diversity-generating retroelements in sequenced genomes
inferred← citeshttps://doi.org/10.4161/viru.22329openalex-snapshot
Virulence factors of the Mycobacterium tuberculosis complex
inferred← citeshttps://doi.org/10.4161/viru.27193openalex-snapshot
Association between spoligotype-VNTR types and virulence ofMycobacterium bovisin cattle
inferred← citeshttps://doi.org/10.54014/11hv-av1ropenalex-snapshot
The phosphodiesterase, Rv0805, is an unheralded component of TB complex mycobacterial physiology in and beyond cAMP homeostasis
inferred← citeshttps://doi.org/10.64898/2026.07.01.735885openalex-snapshot
High Dimensional Immune Profiling Reveals CD39 as a Correlate of Tuberculosis Disease Severity
inferred← citeshttps://doi.org/10.64898/2026.08.08.743631openalex-snapshot
Mycobacteriophage D29-mediated lysis improves recovery of mycobacterial genomic DNA from low-biomass samples
inferred← citeshttps://doi.org/10.70675/bd3ec2aaz0458z4b4dza60dzc4ff74b05439openalex-snapshot
Comparative genomics and phylogenomics of Mycobacterium tuberculosis with a special emphasis on Mycobacterium africanum
inferred← citeshttps://doi.org/10.7554/elife.108644.2openalex-snapshot
Dynamic Architecture of Mycobacterial Outer Membranes Revealed by All-Atom Simulations
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