On the public citation graph

Transcriptomic analysis of the role of Rim101/PacC in the adaptation of Ustilago maydis to an alkaline environment

https://doi.org/10.1099/mic.0.076216-0
0 signed · 83 inferred · view as graph

Inferred edges come from two machine sources: sweeps of open repository metadata (mostly SSRN and Zenodo), and a bulk OpenAlex citation snapshot. Every row below is labelled with the one it came from. Neither is a complete citation index — absence here is not evidence of absence.

Is this your work? Sign in with ORCID and put your name on the claims that are yours.
Claim with ORCID
Reference health. See whether every reference in this work resolves to a known work and none has been retracted — and get a dated CiteStamped badge you can embed.
See reference health

What this work says

Outgoing claims: the papers this work cites, builds on, or argues with.

inferredcites →https://doi.org/10.1002/j.1460-2075.1985.tb03949.xopenalex-snapshot
High level expression of introduced chimaeric genes in regenerated transformed plants
inferredcites →https://doi.org/10.1002/j.1460-2075.1995.tb07056.xopenalex-snapshot
The Aspergillus PacC zinc finger transcription factor mediates regulation of both acid‐ and alkaline‐expressed genes by ambient pH.
inferredcites →https://doi.org/10.1007/978-3-642-79856-6_10openalex-snapshot
Yarrowia lipolytica
inferredcites →https://doi.org/10.1007/bf00297286openalex-snapshot
Two new genes involved in signalling ambient pH in Aspergillus nidulans
inferredcites →https://doi.org/10.1007/bf00333978openalex-snapshot
Regulation of gene expression by pH of the growth medium in Aspergillus nidulans
inferredcites →https://doi.org/10.1007/bf00571164openalex-snapshot
pH and membrane-potential changes during glucose uptake inLemna gibba G1 and their response to light
inferredcites →https://doi.org/10.1016/0092-8674(81)90015-5openalex-snapshot
Feedback control of mitosis in budding yeast
inferredcites →https://doi.org/10.1016/j.carbpol.2011.06.077openalex-snapshot
A novel polysaccharide secreted by pal/rim mutants of the phytopathogen fungus Ustilago maydis
inferredcites →https://doi.org/10.1016/j.fgb.2010.02.004openalex-snapshot
Functional analysis of the pH responsive pathway Pal/Rim in the phytopathogenic basidiomycete Ustilago maydis
inferredcites →https://doi.org/10.1016/j.gene.2003.11.021openalex-snapshot
Rax1, a protein required for the establishment of the bipolar budding pattern in yeast
inferredcites →https://doi.org/10.1016/j.tim.2008.03.006openalex-snapshot
Ambient pH gene regulation in fungi: making connections
inferredcites →https://doi.org/10.1017/s0016672300000719openalex-snapshot
The genetics ofUstilago maydis
inferredcites →https://doi.org/10.1073/pnas.86.15.5878openalex-snapshot
Different a alleles of Ustilago maydis are necessary for maintenance of filamentous growth but not for meiosis
inferredcites →https://doi.org/10.1074/jbc.271.46.28825openalex-snapshot
Three Binding Sites for the Aspergillus nidulans PacC Zinc-finger Transcription Factor Are Necessary and Sufficient for Regulation by Ambient pH of the Isopenicillin N Synthase Gene Promoter
inferredcites →https://doi.org/10.1074/jbc.275.10.6777openalex-snapshot
pH and Calcium Regulate the Water Permeability of Aquaporin 0
inferredcites →https://doi.org/10.1074/jbc.a117.710470openalex-snapshot
Vacuolar and plasma membrane proton pumps collaborate to achieve cytosolic pH homeostasis in yeast.
inferredcites →https://doi.org/10.1074/jbc.m008381200openalex-snapshot
Alkaline Response Genes of Saccharomyces cerevisiaeand Their Relationship to the RIM101 Pathway
inferredcites →https://doi.org/10.1074/jbc.m110.197889openalex-snapshot
pH-dependent Cargo Sorting from the Golgi
inferredcites →https://doi.org/10.1074/jbc.m410041200openalex-snapshot
Four Na+/H+ Exchanger Isoforms Are Distributed to Golgi and Post-Golgi Compartments and Are Involved in Organelle pH Regulation
inferredcites →https://doi.org/10.1074/jbc.m710470200openalex-snapshot
Vacuolar and Plasma Membrane Proton Pumps Collaborate to Achieve Cytosolic pH Homeostasis in Yeast
inferredcites →https://doi.org/10.1074/jbc.m803865200openalex-snapshot
On the pH Regulation of Plant Aquaporins
inferredcites →https://doi.org/10.1074/jbc.m900095200openalex-snapshot
The Filament-specific Rep1-1 Repellent of the Phytopathogen Ustilago maydis Forms Functional Surface-active Amyloid-like Fibrils
inferredcites →https://doi.org/10.1083/jcb.200203094openalex-snapshot
The Saccharomyces cerevisiae Mob2p–Cbk1p kinase complex promotes polarized growth and acts with the mitotic exit network to facilitate daughter cell–specific localization of Ace2p transcription factor
inferredcites →https://doi.org/10.1091/mbc.6.8.1011openalex-snapshot
The rho-GAP encoded by BEM2 regulates cytoskeletal structure in budding yeast.
inferredcites →https://doi.org/10.1091/mbc.e11-04-0378openalex-snapshot
The spindle checkpoint protein Mad2 regulates APC/C activity during prometaphase and metaphase of meiosis I in Saccharomyces cerevisiae
inferredcites →https://doi.org/10.1093/database/bar068openalex-snapshot
Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation
inferredcites →https://doi.org/10.1093/genetics/133.1.67openalex-snapshot
Identification of functionally related genes that stimulate early meiotic gene expression in yeast.
inferredcites →https://doi.org/10.1093/genetics/142.2.359openalex-snapshot
Genetic Analysis of the Saccharomyces cerevisiae RHO3 Gene, Encoding a Rho-Type Small GTPase, Provides Evidence for a Role in Bud Formation
inferredcites →https://doi.org/10.1093/genetics/148.1.123openalex-snapshot
The Neurospora aab-1 gene encodes a CCAAT Binding Protein Homologous to Yeast HAP5
inferredcites →https://doi.org/10.1093/nar/30.1.276openalex-snapshot
The Pfam Protein Families Database
inferredcites →https://doi.org/10.1093/nar/gkj003openalex-snapshot
MPact: the MIPS protein interaction resource on yeast
inferredcites →https://doi.org/10.1093/nar/gkj013openalex-snapshot
The YEASTRACT database: a tool for the analysis of transcription regulatory associations in Saccharomyces cerevisiae
inferredcites →https://doi.org/10.1093/nar/gkm976openalex-snapshot
YEASTRACT-DISCOVERER: new tools to improve the analysis of transcriptional regulatory associations in Saccharomyces cerevisiae
inferredcites →https://doi.org/10.1093/nar/gkq964openalex-snapshot
YEASTRACT: providing a programmatic access to curated transcriptional regulatory associations in Saccharomyces cerevisiae through a web services interface
inferredcites →https://doi.org/10.1093/nar/gkr1065openalex-snapshot
The Pfam protein families database
inferredcites →https://doi.org/10.1093/nar/gkr981openalex-snapshot
Reorganizing the protein space at the Universal Protein Resource (UniProt)
inferredcites →https://doi.org/10.1093/nar/gks060openalex-snapshot
A transposase strategy for creating libraries of circularly permuted proteins
inferredcites →https://doi.org/10.1093/nar/gkt1015openalex-snapshot
The YEASTRACT database: an upgraded information system for the analysis of gene and genomic transcription regulation inSaccharomyces cerevisiae
inferredcites →https://doi.org/10.1099/13500872-141-3-695openalex-snapshot
Yeast-mycelial dimorphism of haploid and diploid strains of Ustilago maydis
inferredcites →https://doi.org/10.1101/gad.203501openalex-snapshot
Whi3 binds the mRNA of the G1 cyclin CLN3 to modulate cell fate in budding yeast
inferredcites →https://doi.org/10.1111/j.1365-2958.1993.tb01175.xopenalex-snapshot
Specific binding sites in the alcR and alcA promoters of the ethanol regulon for the CREA repressor mediating carbon cataboiite repression in Aspergillus nidulans
inferredcites →https://doi.org/10.1111/j.1365-2958.2011.07778.xopenalex-snapshot
The MAP kinase MpkA controls cell wall integrity, oxidative stress response, gliotoxin production and iron adaptation in Aspergillus fumigatus
inferredcites →https://doi.org/10.1111/j.1462-5822.2008.01198.xopenalex-snapshot
Candida albicanstranscription factor Rim101 mediates pathogenic interactions through cell wall functions
inferredcites →https://doi.org/10.1111/j.1472-765x.1992.tb00715.xopenalex-snapshot
Effects of extracellular pH and phenolic monomers on glucose uptake by Fibrobacter succinogenes S85
inferredcites →https://doi.org/10.1111/j.1567-1364.2012.00805.xopenalex-snapshot
The regulation of different metabolic pathways through the Pal/Rim pathway in Ustilago maydis
inferredcites →https://doi.org/10.1111/j.1574-6968.2007.00951.xopenalex-snapshot
Phenotypic characterization of mutants of the citrus pathogenColletotrichum acutatumdefective in a PacC-mediated pH regulatory pathway
inferredcites →https://doi.org/10.1128/ec.00252-08openalex-snapshot
Growth at High pH and Sodium and Potassium Tolerance in Media above the Cytoplasmic pH Depend on ENA ATPases in Ustilago maydis
inferredcites →https://doi.org/10.1128/ec.00277-12openalex-snapshot
Control of Polarized Growth by the Rho Family GTPase Rho4 in Budding Yeast: Requirement of the N-Terminal Extension of Rho4 and Regulation by the Rho GTPase-Activating Protein Bem2
inferredcites →https://doi.org/10.1128/ec.3.2.561-563.2004openalex-snapshot
Biosynthesis and Uptake of Siderophores Is Controlled by the PacC-Mediated Ambient-pH Regulatory System in Aspergillus nidulans
inferredcites →https://doi.org/10.1128/ec.4.6.999-1008.2005openalex-snapshot
The RIM101/pacC Homologue from the Basidiomycete Ustilago maydis Is Functional in Multiple pH-Sensitive Phenomena
inferredcites →https://doi.org/10.1128/iai.68.10.5953-5959.2000openalex-snapshot
Candida albicans RIM101 pH Response Pathway Is Required for Host-Pathogen Interactions
inferredcites →https://doi.org/10.1128/jb.01668-09openalex-snapshot
Negative Regulation of Expression of the Nitrate AssimilationnirAOperon in the Heterocyst-Forming CyanobacteriumAnabaenasp. Strain PCC 7120
inferredcites →https://doi.org/10.1128/mbio.00055-11openalex-snapshot
The Fungal Pathogen Candida albicans Autoinduces Hyphal Morphogenesis by Raising Extracellular pH
inferredcites →https://doi.org/10.1128/mcb.01055-07openalex-snapshot
Regulation of Gluconeogenesis in Saccharomyces cerevisiae Is Mediated by Activator and Repressor Functions of Rds2
inferredcites →https://doi.org/10.1128/mcb.23.2.677-686.2003openalex-snapshot
The Transcription Factor Rim101p Governs Ion Tolerance and Cell Differentiation by Direct Repression of the Regulatory Genes NRG1 and SMP1 in Saccharomyces cerevisiae
inferredcites →https://doi.org/10.1251/bpo126openalex-snapshot
Microarray validation: factors influencing correlation between oligonucleotide microarrays and real-time PCR
inferredcites →https://doi.org/10.1371/journal.ppat.1000776openalex-snapshot
Interaction of Cryptococcus neoformans Rim101 and Protein Kinase A Regulates Capsule

What points at this work

Incoming claims: where this work appears in other papers’ reference lists and arguments.

inferred← citeshttps://doi.org/10.2139/ssrn.4181212openalex-extracted
Pacc Mediates Ph and Osmotic Stress, Fruiting Body Development, And Polysaccharide Biosynthesis In Cordyceps Militaris
inferred← citeshttps://doi.org/10.1002/jobm.201600130openalex-snapshot
Adaptation of Ustilago maydis to extreme pH values: A transcriptomic analysis
inferred← citeshttps://doi.org/10.1007/s00203-015-1087-2openalex-snapshot
Regulation of the expression of the whole genome of Ustilago maydis by a MAPK pathway
inferred← citeshttps://doi.org/10.1007/s00203-020-01936-6openalex-snapshot
The UMAG_00031 gene from Ustilago maydis encodes a putative membrane protein involved in pH control and morphogenesis
inferred← citeshttps://doi.org/10.1007/s00294-017-0772-xopenalex-snapshot
Functional diversity in the pH signaling pathway: an overview of the pathway regulation in Neurospora crassa
inferred← citeshttps://doi.org/10.1007/s12275-015-5247-5openalex-snapshot
The cAMP/protein kinase A signaling pathway in pathogenic basidiomycete fungi: Connections with iron homeostasis
inferred← citeshttps://doi.org/10.1016/j.carres.2021.108335openalex-snapshot
Chitosan resistance by the deletion of the putative high affinity glucose transporter in the yeast Ustilago maydis
inferred← citeshttps://doi.org/10.1016/j.funbio.2025.101713openalex-snapshot
Role of the putative transcription factor Rim101 in pH/oxidative stress response and cell wall structure formation in the white-rot fungus Pleurotus ostreatus
inferred← citeshttps://doi.org/10.1016/j.micres.2019.126348openalex-snapshot
Influence of PacC on the environmental stress adaptability and cell wall components of Ganoderma lucidum
inferred← citeshttps://doi.org/10.1016/j.postharvbio.2023.112361openalex-snapshot
PacC mediated ammonia synthesis contributes to the pathogenicity of Trichothecium roseum by regulating reactive oxygen species and extracellular enzymes
inferred← citeshttps://doi.org/10.1016/j.semcdb.2017.08.038openalex-snapshot
ESCRT genes and regulation of developmental signaling
inferred← citeshttps://doi.org/10.1021/acs.jafc.1c04330openalex-snapshot
ThpacC Acts as a Positive Regulator of Homodimericin A Biosynthesis and Antifungal Activities of Trichoderma harzianum 3.9236
inferred← citeshttps://doi.org/10.1038/s41598-022-14515-0openalex-snapshot
Secretion of the siderophore rhizoferrin is regulated by the cAMP-PKA pathway and is involved in the virulence of Mucor lusitanicus
inferred← citeshttps://doi.org/10.1111/1758-2229.12663openalex-snapshot
The pH regulator PacC: a host‐dependent virulence factor in Botrytis cinerea
inferred← citeshttps://doi.org/10.1111/febs.15808openalex-snapshot
Function of pH‐dependent transcription factor PacC in regulating development, pathogenicity, and mycotoxin biosynthesis of phytopathogenic fungi
inferred← citeshttps://doi.org/10.1128/mmbr.00019-21openalex-snapshot
Evolutionary Morphogenesis of Sexual Fruiting Bodies in Basidiomycota: Toward a New Evo-Devo Synthesis
inferred← citeshttps://doi.org/10.12688/f1000research.16404.1openalex-snapshot
Transcripts and tumors: regulatory and metabolic programming during biotrophic phytopathogenesis
inferred← citeshttps://doi.org/10.3389/fmicb.2019.02076openalex-snapshot
The pH Signaling Transcription Factor PAC-3 Regulates Metabolic and Developmental Processes in Pathogenic Fungi
inferred← citeshttps://doi.org/10.3389/fmicb.2022.973670openalex-snapshot
Modulation of extracellular Penicillium expansum-driven acidification by Papiliotrema terrestris affects biosynthesis of patulin and has a possible role in biocontrol activity
inferred← citeshttps://doi.org/10.3389/fmicb.2023.1146210openalex-snapshot
Strain improvement of Trichoderma harzianum for enhanced biocontrol capacity: Strategies and prospects
inferred← citeshttps://doi.org/10.3390/ijms242216103openalex-snapshot
Transcriptome Analysis Reveals the Regulation of Aureobasidium pullulans under Different pH Stress
inferred← citeshttps://doi.org/10.3390/ijms262311450openalex-snapshot
Transcriptional Responses to Alkaline pH Across Fungi: Common and Differential Features, and Biotechnological Applications
inferred← citeshttps://doi.org/10.3390/jof12020114openalex-snapshot
Identification and Transcriptomic Analyses of Two Endophytic Fungi WDR2 and WDR5 from Wild Soybean Elucidates Mechanistic Aspects of Alkali Stress Tolerance
inferred← citeshttps://doi.org/10.3390/jof7020091openalex-snapshot
Acid pH Strategy Adaptation through NRG1 in Ustilago maydis
inferred← citeshttps://doi.org/10.3852/16-079openalex-snapshot
The pH-responsive transcription factor PacC regulates mycelial growth, fruiting body development, and ganoderic acid biosynthesis in Ganoderma lucidum.
inferred← citeshttps://doi.org/10.53846/goediss-7748openalex-snapshot
The Unfolded Protein Response and its interplay with the MAPK-mediated pheromone response pathway in Ustilago maydis
Editorial review for independent work. ICSAC — the Institute for Complexity Science and Advanced Computing — runs a structured editorial panel for researchers publishing outside journals, and publishes on CiteStamp rails. Submission is free and goes through ORCID: icsacinstitute.org/submit.