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Bio4j: a high-performance cloud-enabled graph-based data platform

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What this work says

Outgoing claims: the papers this work cites, builds on, or argues with.

inferredcites →https://doi.org/10.1038/75556openalex-snapshot

Gene Ontology: tool for the unification of biology

inferredcites →https://doi.org/10.1038/nrg2857openalex-snapshot

Computational solutions to large-scale data management and analysis

inferredcites →https://doi.org/10.1073/pnas.1417064112openalex-snapshot

Novel recurrently mutated genes in African American colon cancers

inferredcites →https://doi.org/10.1093/bioinformatics/btm098openalex-snapshot

UniRef: comprehensive and non-redundant UniProt reference clusters

inferredcites →https://doi.org/10.1093/nar/28.1.304openalex-snapshot

The ENZYME database in 2000

inferredcites →https://doi.org/10.1093/nar/gkh073openalex-snapshot

Database resources of the National Center for Biotechnology Information: update

inferredcites →https://doi.org/10.1093/nar/gkn741openalex-snapshot

Database resources of the National Center for Biotechnology Information

inferredcites →https://doi.org/10.1093/nar/gkq1019openalex-snapshot

The Sequence Read Archive

inferredcites →https://doi.org/10.1093/nar/gkt1102openalex-snapshot

The Reactome pathway knowledgebase

inferredcites →https://doi.org/10.1093/nar/gkt1140openalex-snapshot

Activities at the Universal Protein Resource (UniProt)

inferredcites →https://doi.org/10.1093/nar/gku1010openalex-snapshot

Ensembl 2015

inferredcites →https://doi.org/10.1093/nar/gku989openalex-snapshot

UniProt: a hub for protein information

What points at this work

Incoming claims: where this work appears in other papers’ reference lists and arguments.

inferred← citeshttps://doi.org/10.1007/978-3-030-01722-4_5openalex-snapshot

Graph Databases in Molecular Biology

inferred← citeshttps://doi.org/10.1007/978-3-030-33223-5_29openalex-snapshot

From a Conceptual Model to a Knowledge Graph for Genomic Datasets

inferred← citeshttps://doi.org/10.1007/978-3-319-43949-5_17openalex-snapshot

Integrated DB for Bioinformatics: A Case Study on Analysis of Functional Effect of MiRNA SNPs in Cancer

inferred← citeshttps://doi.org/10.1007/978-3-319-56148-6_26openalex-snapshot

Gremlin Language for Querying the BiographDB Integrated Biological Database

inferred← citeshttps://doi.org/10.1007/978-3-319-61566-0_28openalex-snapshot

BioGrakn: A Knowledge Graph-Based Semantic Database for Biomedical Sciences

inferred← citeshttps://doi.org/10.1007/978-981-16-3993-7_12openalex-snapshot

Gene Ontology and Pathway Enrichment Analysis

inferred← citeshttps://doi.org/10.1016/b978-0-12-819350-1.00011-6openalex-snapshot

Biological network databases

inferred← citeshttps://doi.org/10.1038/s41598-019-42178-xopenalex-snapshot

Exploratory Gene Ontology Analysis with Interactive Visualization

inferred← citeshttps://doi.org/10.1093/database/baad069openalex-snapshot

InCliniGene enables high-throughput and comprehensive in vivo clonal tracking toward clinical genomics data integration

inferred← citeshttps://doi.org/10.1093/nar/gkab543openalex-snapshot

CROssBAR: comprehensive resource of biomedical relations with knowledge graph representations

inferred← citeshttps://doi.org/10.1101/021063openalex-snapshot

Biographika: rich interactive data visualizations on the web for the research community

inferred← citeshttps://doi.org/10.1101/027714openalex-snapshot

MG7: Configurable and scalable 16S metagenomics data analysis

inferred← citeshttps://doi.org/10.1109/bibm55620.2022.9995644openalex-snapshot

Integration of Gene Regulatory Pathways Found in the Literature in a Graph Database

inferred← citeshttps://doi.org/10.1145/3340531.3417440openalex-snapshot

M-Cypher

inferred← citeshttps://doi.org/10.1186/s12859-018-2298-8openalex-snapshot

Arena-Idb: a platform to build human non-coding RNA interaction networks

inferred← citeshttps://doi.org/10.1186/s12859-020-03937-0openalex-snapshot

Advantages of using graph databases to explore chromatin conformation capture experiments

inferred← citeshttps://doi.org/10.1186/s12859-021-04429-5openalex-snapshot

TAGOPSIN: collating taxa-specific gene and protein functional and structural information

inferred← citeshttps://doi.org/10.1186/s12859-022-04932-3openalex-snapshot

RTX-KG2: a system for building a semantically standardized knowledge graph for translational biomedicine

inferred← citeshttps://doi.org/10.1186/s12864-016-2783-2openalex-snapshot

Changes in selective pressures associated with human population expansion may explain metabolic and immune related pathways enriched for signatures of positive selection

inferred← citeshttps://doi.org/10.1186/s12918-018-0616-4openalex-snapshot

BioGraph: a web application and a graph database for querying and analyzing bioinformatics resources

inferred← citeshttps://doi.org/10.1186/s13040-016-0102-8openalex-snapshot

Representing and querying disease networks using graph databases

inferred← citeshttps://doi.org/10.1186/s13040-018-0185-5openalex-snapshot

Distributed retrieval engine for the development of cloud-deployed biological databases

inferred← citeshttps://doi.org/10.1200/cci.19.00110openalex-snapshot

Exploring Integrative Analysis Using the BioMedical Evidence Graph

inferred← citeshttps://doi.org/10.12688/f1000research.13925.2openalex-snapshot

BED: a Biological Entity Dictionary based on a graph data model

inferred← citeshttps://doi.org/10.12688/f1000research.13925.3openalex-snapshot

BED: a Biological Entity Dictionary based on a graph data model [version 3; referees: 2 approved]

inferred← citeshttps://doi.org/10.3390/info14030154openalex-snapshot

LPG-Based Knowledge Graphs: A Survey, a Proposal and Current Trends

inferred← citeshttps://doi.org/10.3897/rio.2.e7757openalex-snapshot

The Open Biodiversity Knowledge Management System in Scholarly Publishing

inferred← citeshttps://doi.org/10.4018/978-1-7998-9023-2.ch028openalex-snapshot

Fujitsu HIKARI, a Healthcare Decision Support System based on Biomedical Knowledge

inferred← citeshttps://doi.org/10.4018/ijphim.2018070103openalex-snapshot

Fujitsu HIKARI, a Healthcare Decision Support System based on Biomedical Knowledge

inferred← citeshttps://doi.org/10.51847/vmnq3k5omnopenalex-snapshot

Graphical Data Representation and Analytics to Link the Potential Interaction for Lung Cancer Genes

inferred← citeshttps://doi.org/10.7287/peerj.preprints.3309v1openalex-snapshot

Querying and analyzing biological data with BioGraph

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