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Inferring local movement of pathogen vectors among hosts

https://doi.org/10.1101/046540
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Outgoing claims: the papers this work cites, builds on, or argues with.

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Epigenetic factors in aging and longevity
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Zebra Chip Disease of Potato: Biology, Epidemiology, and Management
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Lepidopteran microsatellite DNA: redundant but promising
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Principal components analysis corrects for stratification in genome-wide association studies
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Patterns of genetic differention between populations of the specialized herbivore Macrosiphoniella tanacetaria (Homoptera, Aphididae)
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Adaptation at specific loci. VII. Natural selection, dispersal and the diversity of molecular–functional variation patterns among butterfly species complexes (Colias: Lepidoptera, Pieridae)
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PLINK: A Tool Set for Whole-Genome Association and Population-Based Linkage Analyses
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A New Problem and Old Questions: Potato Psyllid in the Pacific Northwest
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Arthropod Transmission of Plant Viruses: a New Synthesis
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APE: Analyses of Phylogenetics and Evolution in R language
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Fast and accurate short read alignment with Burrows–Wheeler transform
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The Sequence Alignment/Map format and SAMtools
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Trimmomatic: a flexible trimmer for Illumina sequence data
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Analysis of molecular variance inferred from metric distances among DNA haplotypes: application to human mitochondrial DNA restriction data.
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Patterns of Genetic Structure among Populations of an Oligophagous Pollinating Yucca Moth (Tegeticula yuccasella)
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NCBI reference sequences (RefSeq): a curated non-redundant sequence database of genomes, transcripts and proteins
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The neighbor-joining method: a new method for reconstructing phylogenetic trees.
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A New ‘Candidatus Liberibacter’ Species Associated with Diseases of Solanaceous Crops
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Pea Aphid Outbreaks and Virus Epidemics on Peas in the US Pacific Northwest: Histories, Mysteries, and Challenges
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The significance of low-density populations of the African armyworm Spodoptera exempta (Walk.)
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Slaves of the environment: the movement of herbivorous insects in relation to their ecology and genotype
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Fast model-based estimation of ancestry in unrelated individuals
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Host‐adapted aphid populations differ in their migratory patterns and capacity to colonize crops
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Clumpak : a program for identifying clustering modes and packaging population structure inferences across K
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Landscape structure and locust swarming: a satellite's eye view
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Climate change effects on physiology and population processes of hosts and vectors that influence the spread of hemipteran‐borne plant viruses
inferredcites →https://doi.org/10.1111/j.1365-2583.2006.00713.xopenalex-snapshot
Microsatellite flanking region similarities among different loci within insect species
inferredcites →https://doi.org/10.1111/j.1365-294x.2006.03014.xopenalex-snapshot
Molecular marker systems in insects: current trends and future avenues
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F ‐statistics and analysis of gene diversity in subdivided populations
inferredcites →https://doi.org/10.1111/j.1558-5646.1984.tb05657.xopenalex-snapshot
ESTIMATING F -STATISTICS FOR THE ANALYSIS OF POPULATION STRUCTURE
inferredcites →https://doi.org/10.1111/j.1755-0998.2010.02967.xopenalex-snapshot
Next‐generation RAD sequencing identifies thousands of SNPs for assessing hybridization between rainbow and westslope cutthroat trout
inferredcites →https://doi.org/10.1111/mec.12082openalex-snapshot
Genome‐wide association reveals genetic basis for the propensity to migrate in wild populations of rainbow and steelhead trout
inferredcites →https://doi.org/10.1111/mec.12083openalex-snapshot
Population genomic signatures of divergent adaptation, gene flow and hybrid speciation in the rapid radiation of L ake V ictoria cichlid fishes
inferredcites →https://doi.org/10.1111/mec.12120openalex-snapshot
Genetic basis of male colour dimorphism in a L ake T anganyika cichlid fish
inferredcites →https://doi.org/10.1111/mec.12201openalex-snapshot
The genomic consequences of adaptive divergence and reproductive isolation between species of manakins
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RAD‐Seq derived markers flank the shell colour and banding loci of the Cepaea nemoralis supergene
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Revisiting comparisons of genetic diversity in stable and declining species: assessing genome‐wide polymorphism in N orth A merican bumble bees using RAD sequencing
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Sun skink landscape genomics: assessing the roles of micro‐evolutionary processes in shaping genetic and phenotypic diversity across a heterogeneous and fragmented landscape
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Rapid diversification associated with ecological specialization in NeotropicalAdelphabutterflies
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Seven common mistakes in population genetics and how to avoid them
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Population genomic footprints of fine‐scale differentiation between habitats in Mediterranean blue tits
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Single-nucleotide polymorphisms reveal distribution and migration of Chinook salmon (Oncorhynchus tshawytscha) in the Bering Sea and North Pacific Ocean
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Repetitive genome elements in a European corn borer, Ostrinia nubilalis, bacterial artificial chromosome library were indicated by bacterial artificial chromosome end sequencing and development of sequence tag site markers: implications for lepidopteran genomic research
inferredcites →https://doi.org/10.1139/z84-014openalex-snapshot
Aquatic feeding by moose: selection of plant species and feeding areas in relation to plant chemical composition and characteristics of lakes
inferredcites →https://doi.org/10.1139/z99-088openalex-snapshot
Spatial distribution of Serengeti wildebeest in relation to resources
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Methods for Marking Insects: Current Techniques and Future Prospects
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T HE B IOLOGY OF X YLEM F LUID –F EEDING I NSECT V ECTORS OF X YLELLA FASTIDIOSA AND T HEIR R ELATION TO D ISEASE E PIDEMIOLOGY
inferredcites →https://doi.org/10.1146/annurev.ento.51.110104.151039openalex-snapshot
INSECT VECTORS OF PHYTOPLASMAS
inferredcites →https://doi.org/10.1186/1471-2164-15-275openalex-snapshot
Genome-wide SNPs lead to strong signals of geographic structure and relatedness patterns in the major arbovirus vector, Aedes aegypti
inferredcites →https://doi.org/10.1371/journal.pgen.1000862openalex-snapshot
Population Genomics of Parallel Adaptation in Threespine Stickleback using Sequenced RAD Tags
inferredcites →https://doi.org/10.1371/journal.pone.0068679openalex-snapshot
Landscape Movements of Anopheles gambiae Malaria Vector Mosquitoes in Rural Gambia
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Migratory Herbivorous Waterfowl Track Satellite-Derived Green Wave Index
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Comparison of Predator and Pest Communities in Washington Potato Fields Treated with Broad-Spectrum, Selective, or Organic Insecticides
inferredcites →https://doi.org/10.1603/ipm13014openalex-snapshot
Potato Leafhopper (Hemiptera: Cicadellidae) Ecology and Integrated Pest Management Focused on Alfalfa
inferredcites →https://doi.org/10.18637/jss.v022.i02openalex-snapshot
Analogue Methods in Palaeoecology: Using theanaloguePackage
inferredcites →https://doi.org/10.18637/jss.v022.i04openalex-snapshot
The ade4 Package: Implementing the Duality Diagram for Ecologists
inferredcites →https://doi.org/10.1890/0012-9658(1997)078[0167:hppabd]2.0.co;2openalex-snapshot
HOST PLANT PHENOLOGY AND BUTTERFLY DISPERSAL: CAUSES AND CONSEQUENCES OF UPHILL MOVEMENT
inferredcites →https://doi.org/10.1890/es10-00096.1openalex-snapshot
Timing of seasonal migration in mule deer: effects of climate, plant phenology, and life-history characteristics
inferredcites →https://doi.org/10.1890/es10-00117.1openalex-snapshot
Using null models to disentangle variation in community dissimilarity from variation in α-diversity
inferredcites →https://doi.org/10.2307/1937001openalex-snapshot
Food Plant Selection by a Generalist Herbivore: The Moose
inferredcites →https://doi.org/10.2307/1939058openalex-snapshot
Effects of Plant Density and Diversity on the Population Dynamics of a Specialist Herbivore, the Striped Cucumber Beetle, Acalymma Vittata (Fab)
inferredcites →https://doi.org/10.2307/1939858openalex-snapshot
Plant Community Diversity, Herbivore Movement, and an Insect‐Transmitted Disease of Maize
inferredcites →https://doi.org/10.2307/1941203openalex-snapshot
Vector Preference and Disease Dynamics: A Study of Barley Yellow Dwarf Virus
inferredcites →https://doi.org/10.2307/5521openalex-snapshot
Discrimination and Patch Choice by Sheep Grazing Grass-Clover Swards
inferredcites →https://doi.org/10.32614/r.manualsopenalex-snapshot
R: A Language and Environment for Statistical Computing
inferredcites →https://doi.org/10.3389/fgene.2015.00208openalex-snapshot
Novel R tools for analysis of genome-wide population genetic data with emphasis on clonality
inferredcites →https://doi.org/10.7150/jgen.7692openalex-snapshot
Characterization of the Asian Citrus Psyllid Transcriptome
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From promise to practice: pairing non-invasive sampling with genomics in conservation
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Poppr : an R package for genetic analysis of populations with clonal, partially clonal, and/or sexual reproduction

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inferred← citeshttps://doi.org/10.1002/eap.2109openalex-snapshot
Landscape structure and climate drive population dynamics of an insect vector within intensely managed agroecosystems
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