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Functional enrichments of disease variants across thousands of independent loci in eight diseases
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What this work says
Outgoing claims: the papers this work cites, builds on, or argues with.
inferredcites →https://doi.org/10.1007/978-3-7091-6721-2_3openalex-snapshot
Aberrant protein expression of transcription factors BACH1 and ERG, both encoded on chromosome 21, in brains of patients with Down syndrome and Alzheimer’s disease
inferredcites →https://doi.org/10.1007/s12026-015-8651-3openalex-snapshot
Epithelial-specific ETS-1 (ESE1/ELF3) regulates apoptosis of intestinal epithelial cells in ulcerative colitis via accelerating NF-κB activation
inferredcites →https://doi.org/10.1016/j.ajhg.2010.11.011openalex-snapshot
GCTA: A Tool for Genome-wide Complex Trait Analysis
inferredcites →https://doi.org/10.1016/j.ajhg.2014.03.004openalex-snapshot
Joint Analysis of Functional Genomic Data and Genome-wide Association Studies of 18 Human Traits
inferredcites →https://doi.org/10.1016/j.ajhg.2014.10.004openalex-snapshot
Partitioning Heritability of Regulatory and Cell-Type-Specific Variants across 11 Common Diseases
inferredcites →https://doi.org/10.1016/j.cell.2013.09.053openalex-snapshot
Super-Enhancers in the Control of Cell Identity and Disease
inferredcites →https://doi.org/10.1016/j.cell.2013.10.058openalex-snapshot
Leveraging Cross-Species Transcription Factor Binding Site Patterns: From Diabetes Risk Loci to Disease Mechanisms
inferredcites →https://doi.org/10.1016/j.mcn.2010.07.013openalex-snapshot
Uncx regulates proliferation of neural progenitor cells and neuronal survival in the olfactory epithelium
inferredcites →https://doi.org/10.1016/s1097-2765(03)00500-8openalex-snapshot
Immunity Regulatory DNAs Share Common Organizational Features in Drosophila
inferredcites →https://doi.org/10.1038/nature08494openalex-snapshot
Finding the missing heritability of complex diseases
inferredcites →https://doi.org/10.1038/nature09906openalex-snapshot
Mapping and analysis of chromatin state dynamics in nine human cell types
inferredcites →https://doi.org/10.1038/nature11247openalex-snapshot
An integrated encyclopedia of DNA elements in the human genome
inferredcites →https://doi.org/10.1038/nature14248openalex-snapshot
Integrative analysis of 111 reference human epigenomes
inferredcites →https://doi.org/10.1038/nature14252openalex-snapshot
Conserved epigenomic signals in mice and humans reveal immune basis of Alzheimer’s disease
inferredcites →https://doi.org/10.1038/nature16549openalex-snapshot
Schizophrenia risk from complex variation of complement component 4
inferredcites →https://doi.org/10.1038/nbt.1630openalex-snapshot
GREAT improves functional interpretation of cis-regulatory regions
inferredcites →https://doi.org/10.1038/ng.1108openalex-snapshot
Estimating the proportion of variation in susceptibility to schizophrenia captured by common SNPs
inferredcites →https://doi.org/10.1038/ng.2354openalex-snapshot
Fast and accurate genotype imputation in genome-wide association studies through pre-phasing
inferredcites →https://doi.org/10.1038/ng.2416openalex-snapshot
Breast cancer risk–associated SNPs modulate the affinity of chromatin for FOXA1 and alter gene expression
inferredcites →https://doi.org/10.1038/ng.2504openalex-snapshot
Chromatin marks identify critical cell types for fine mapping complex trait variants
inferredcites →https://doi.org/10.1038/ng.2870openalex-snapshot
Pancreatic islet enhancer clusters enriched in type 2 diabetes risk-associated variants
inferredcites →https://doi.org/10.1038/ng.3097openalex-snapshot
Defining the role of common variation in the genomic and biological architecture of adult human height
inferredcites →https://doi.org/10.1038/ng.3404openalex-snapshot
Partitioning heritability by functional annotation using genome-wide association summary statistics
inferredcites →https://doi.org/10.1038/ng.3406openalex-snapshot
An atlas of genetic correlations across human diseases and traits
inferredcites →https://doi.org/10.1038/ng.608openalex-snapshot
Common SNPs explain a large proportion of the heritability for human height
inferredcites →https://doi.org/10.1038/ng2088openalex-snapshot
A new multipoint method for genome-wide association studies by imputation of genotypes
inferredcites →https://doi.org/10.1038/nmeth.1906openalex-snapshot
ChromHMM: automating chromatin-state discovery and characterization
inferredcites →https://doi.org/10.1038/nri3705openalex-snapshot
Innate immune activation in neurodegenerative disease
inferredcites →https://doi.org/10.1038/sj.mp.4001689openalex-snapshot
Identification of a potential Bipolar risk haplotype in the gene encoding the winged-helix transcription factor RFX4
inferredcites →https://doi.org/10.1056/nejmp0806284openalex-snapshot
Common Genetic Variation and Human Traits
inferredcites →https://doi.org/10.1073/pnas.0506580102openalex-snapshot
Gene set enrichment analysis: A knowledge-based approach for interpreting genome-wide expression profiles
inferredcites →https://doi.org/10.1073/pnas.0903103106openalex-snapshot
Potential etiologic and functional implications of genome-wide association loci for human diseases and traits
inferredcites →https://doi.org/10.1073/pnas.1419064111openalex-snapshot
Measuring missing heritability: Inferring the contribution of common variants
inferredcites →https://doi.org/10.1074/jbc.m208144200openalex-snapshot
Physical and Functional Interactions among AP-2 Transcription Factors, p300/CREB-binding Protein, and CITED2
inferredcites →https://doi.org/10.1084/jem.20041330openalex-snapshot
Ets-1, a functional cofactor of T-bet, is essential for Th1 inflammatory responses
inferredcites →https://doi.org/10.1093/bioinformatics/btq033openalex-snapshot
BEDTools: a flexible suite of utilities for comparing genomic features
inferredcites →https://doi.org/10.1093/bioinformatics/btu416openalex-snapshot
Fast and accurate imputation of summary statistics enhances evidence of functional enrichment
inferredcites →https://doi.org/10.1093/nar/gkq912openalex-snapshot
T1DBase: update 2011, organization and presentation of large-scale data sets for type 1 diabetes research
inferredcites →https://doi.org/10.1093/nar/gkt1229openalex-snapshot
The NHGRI GWAS Catalog, a curated resource of SNP-trait associations
inferredcites →https://doi.org/10.1093/nar/gkt1249openalex-snapshot
Systematic discovery and characterization of regulatory motifs in ENCODE TF binding experiments
inferredcites →https://doi.org/10.1111/j.1582-4934.2009.00383.xopenalex-snapshot
RXRA gene variations influence Alzheimer's disease risk and cholesterol metabolism
inferredcites →https://doi.org/10.1126/science.1088477openalex-snapshot
Mutation of MEF2A in an Inherited Disorder with Features of Coronary Artery Disease
inferredcites →https://doi.org/10.1126/science.1222794openalex-snapshot
Systematic Localization of Common Disease-Associated Variation in Regulatory DNA
inferredcites →https://doi.org/10.1172/jci30076openalex-snapshot
The role of gut hormones in glucose homeostasis
inferredcites →https://doi.org/10.1177/0004867413499077openalex-snapshot
Immune dysregulation and autoimmunity in bipolar disorder: Synthesis of the evidence and its clinical application
inferredcites →https://doi.org/10.1198/016214501753382129openalex-snapshot
Empirical Bayes Analysis of a Microarray Experiment
inferredcites →https://doi.org/10.1198/016214507000001373openalex-snapshot
Hierarchical False Discovery Rate–Controlling Methodology
inferredcites →https://doi.org/10.1214/12-ba703openalex-snapshot
Scalable Variational Inference for Bayesian Variable Selection in Regression, and Its Accuracy in Genetic Association Studies
inferredcites →https://doi.org/10.1242/dev.01370openalex-snapshot
Essential role of Gata transcription factors in sympathetic neuron development
inferredcites →https://doi.org/10.1371/journal.pgen.1000529openalex-snapshot
A Flexible and Accurate Genotype Imputation Method for the Next Generation of Genome-Wide Association Studies
inferredcites →https://doi.org/10.1371/journal.pgen.1003770openalex-snapshot
Integrated Enrichment Analysis of Variants and Pathways in Genome-Wide Association Studies Indicates Central Role for IL-2 Signaling Genes in Type 1 Diabetes, and Cytokine Signaling Genes in Crohn's Disease
inferredcites →https://doi.org/10.1371/journal.pgen.1004969openalex-snapshot
Simultaneous Discovery, Estimation and Prediction Analysis of Complex Traits Using a Bayesian Mixture Model
inferredcites →https://doi.org/10.1523/jneurosci.0519-10.2010openalex-snapshot
Tyk2/STAT3 Signaling Mediates β-Amyloid-Induced Neuronal Cell Death: Implications in Alzheimer's Disease
What points at this work
Incoming claims: where this work appears in other papers’ reference lists and arguments.
inferred← citeshttps://doi.org/10.1007/s40142-016-0102-5openalex-snapshot
Integrative Networks Illuminate Biological Factors Underlying Gene–Disease Associations
inferred← citeshttps://doi.org/10.1038/ng.3841openalex-snapshot
Genomic analyses identify hundreds of variants associated with age at menarche and support a role for puberty timing in cancer risk
inferred← citeshttps://doi.org/10.1101/076794openalex-snapshot
Genomic analyses for age at menarche identify 389 independent signals and indicate BMI-independent effects of puberty timing on cancer susceptibility
inferred← citeshttps://doi.org/10.1371/journal.pgen.1006933openalex-snapshot
Systematic tissue-specific functional annotation of the human genome highlights immune-related DNA elements for late-onset Alzheimer’s disease
inferred← citeshttps://doi.org/10.1530/ey.15.7.5openalex-snapshot
Genomic analyses identify hundreds of variants associated with age at menarche and support a role for puberty timing in cancer risk
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