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High-Throughput Sequencing of Transposable Element Insertions Suggests Adaptive Evolution of the Invasive Asian Tiger Mosquito Towards Temperate Environments

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What this work says

Outgoing claims: the papers this work cites, builds on, or argues with.

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EVOLUTION OF PHENOTYPIC PLASTICITY IN COLONIZING SPECIES

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IRE-Bubble PCR: A Rapid Method for Efficient and Representative Amplification of Human Genomic DNA Sequences from Complex Sources

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Metric and Euclidean properties of dissimilarity coefficients

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Repeated introduction of Aedes albopictus into Germany, July to October 2012

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Genetic differentiation of invasive Aedes albopictus by RAPD-PCR: implications for effective vector control

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Natural Mutagenesis of Human Genomes by Endogenous Retrotransposons

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Application of iPBS in high-throughput sequencing for the development of retrotransposon-based molecular markers

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The Genetics of Human Adaptation: Hard Sweeps, Soft Sweeps, and Polygenic Adaptation

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Aedes albopictus, an arbovirus vector: From the darkness to the light

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The invasive mosquito species Aedes albopictus: current knowledge and future perspectives

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The hitch-hiking effect of a favourable gene

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Recently integrated human Alu repeats: finding needles in the haystack

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Breeding structure of a colonising species: Aedes albopictus (Skuse) in the United States

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Geographic origin of the US and Brazilian Aedes albopictus inferred from allozyme analysis

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Population genetics of the Asian tiger mosquito Aedes albopictus, an invasive vector of human diseases

inferredcites →https://doi.org/10.1038/ncomms6495openalex-snapshot

Transposable element islands facilitate adaptation to novel environments in an invasive species

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Population structure of Aedes albopictus (Skuse): the mosquito which is colonizing Mediterranean countries

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Transposable element (TE) display and rapid detection of TE insertion polymorphism in the Anopheles gambiae species complex

inferredcites →https://doi.org/10.1073/pnas.1516410112openalex-snapshot

Genome sequence of the Asian Tiger mosquito, Aedes albopictus , reveals insights into its biology, genetics, and evolution

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Rapid Adaptive Evolution of Photoperiodic Response during Invasion and Range Expansion across a Climatic Gradient

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Introduction, Scenarios for Establishment and Seasonal Activity of Aedes albopictus in The Netherlands

inferredcites →https://doi.org/10.1093/bioinformatics/btl158openalex-snapshot

Cd-hit: a fast program for clustering and comparing large sets of protein or nucleotide sequences

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BEDTools: a flexible suite of utilities for comparing genomic features

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Specific Activation of an I-Like Element in Drosophila Interspecific Hybrids

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De Novo Assembly and Annotation of the Asian Tiger Mosquito (Aedes albopictus) Repeatome with dnaPipeTE from Raw Genomic Reads and Comparative Analysis with the Yellow Fever Mosquito (Aedes aegypti)

inferredcites →https://doi.org/10.1093/genetics/123.3.585openalex-snapshot

Statistical method for testing the neutral mutation hypothesis by DNA polymorphism.

inferredcites →https://doi.org/10.1093/genetics/134.4.1289openalex-snapshot

The effect of deleterious mutations on neutral molecular variation.

inferredcites →https://doi.org/10.1093/genetics/140.2.783openalex-snapshot

The hitchhiking effect on the site frequency spectrum of DNA polymorphisms.

inferredcites →https://doi.org/10.1093/genetics/155.3.1405openalex-snapshot

Hitchhiking Under Positive Darwinian Selection

inferredcites →https://doi.org/10.1093/genetics/74.1.175openalex-snapshot

DISTRIBUTION OF GENE FREQUENCY AS A TEST OF THE THEORY OF THE SELECTIVE NEUTRALITY OF POLYMORPHISMS

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Cold Acclimation, Diapause, and Geographic Origin Affect Cold Hardiness in Eggs of Aedes albopictus (Diptera: Culicidae)

inferredcites →https://doi.org/10.1098/rspb.2010.0362openalex-snapshot

The molecular physiology of increased egg desiccation resistance during diapause in the invasive mosquito,Aedes albopictus

inferredcites →https://doi.org/10.1098/rspb.2013.0143openalex-snapshot

Deep sequencing reveals complex mechanisms of diapause preparation in the invasive mosquito, Aedes albopictus

inferredcites →https://doi.org/10.1098/rstb.2009.0278openalex-snapshot

Genetic hitchhiking versus background selection: the controversy and its implications

inferredcites →https://doi.org/10.1101/gr.148973.112openalex-snapshot

Mobile element scanning (ME-Scan) identifies thousands of novel Alu insertions in diverse human populations

inferredcites →https://doi.org/10.1101/gr.5681207openalex-snapshot

Rapid and cost-effective polymorphism identification and genotyping using restriction site associated DNA (RAD) markers

inferredcites →https://doi.org/10.1101/gr.894603openalex-snapshot

Genetic Variation Among World Populations: Inferences From 100 Alu Insertion Polymorphisms

inferredcites →https://doi.org/10.1111/1755-0998.12406openalex-snapshot

Double‐digest RAD sequencing using I on P roton semiconductor platform (dd RAD seq‐ion) with nonmodel organisms

inferredcites →https://doi.org/10.1111/j.1365-294x.2006.03150.xopenalex-snapshot

Insertion polymorphism of transposable elements and population structure of Anopheles gambiae M and S molecular forms in Cameroon

inferredcites →https://doi.org/10.1111/j.1365-313x.2011.04492.xopenalex-snapshot

Transpositional landscape of the rice genome revealed by paired‐end mapping of high‐throughput re‐sequencing data

inferredcites →https://doi.org/10.1111/j.1420-9101.2010.02093.xopenalex-snapshot

Comparing three different methods to detect selective loci using dominant markers

inferredcites →https://doi.org/10.1111/j.1755-0998.2010.02847.xopenalex-snapshot

Arlequin suite ver 3.5: a new series of programs to perform population genetics analyses under Linux and Windows

inferredcites →https://doi.org/10.1111/j.1755-0998.2011.02987.xopenalex-snapshot

Comparison of FST outlier tests for SNP loci under selection

inferredcites →https://doi.org/10.1111/mec.12084openalex-snapshot

Special features of RAD Sequencing data: implications for genotyping

inferredcites →https://doi.org/10.1111/mec.12170openalex-snapshot

The impact of transposable elements in environmental adaptation

inferredcites →https://doi.org/10.1111/mec.12705openalex-snapshot

Genome scan methods against more complex models: when and how much should we trust them?

inferredcites →https://doi.org/10.1111/mec.13089openalex-snapshot

Transposable elements as agents of rapid adaptation may explain the genetic paradox of invasive species

inferredcites →https://doi.org/10.1111/mec.13154openalex-snapshot

Expansion load: recessive mutations and the role of standing genetic variation

inferredcites →https://doi.org/10.1111/mec.13162openalex-snapshot

Contemporary evolution during invasion: evidence for differentiation, natural selection, and local adaptation

inferredcites →https://doi.org/10.1126/science.1259114openalex-snapshot

An RNA polymerase III subunit determines sites of retrotransposon integration

inferredcites →https://doi.org/10.1126/science.3576225openalex-snapshot

Aedes albopictus in North America: Probable Introduction in Used Tires from Northern Asia

inferredcites →https://doi.org/10.1128/jvi.07146-11openalex-snapshot

tirant , a Newly Discovered Active Endogenous Retrovirus in Drosophila simulans

inferredcites →https://doi.org/10.1146/annurev-genet-111212-133526openalex-snapshot

Detecting Natural Selection in Genomic Data

inferredcites →https://doi.org/10.1146/annurev.genet.39.073003.112420openalex-snapshot

Molecular Signatures of Natural Selection

inferredcites →https://doi.org/10.1186/1471-2164-10-551openalex-snapshot

Candidate genes revealed by a genome scan for mosquito resistance to a bacterial insecticide: sequence and gene expression variations

inferredcites →https://doi.org/10.1186/1471-2164-11-410openalex-snapshot

Mobile element scanning (ME-Scan) by targeted high-throughput sequencing

inferredcites →https://doi.org/10.1186/1471-2164-9-459openalex-snapshot

A MITE-based genotyping method to reveal hundreds of DNA polymorphisms in an animal genome after a few generations of artificial selection

inferredcites →https://doi.org/10.1186/1475-2875-7-163openalex-snapshot

Insertion polymorphisms of SINE200 retrotransposons within speciation islands of Anopheles gambiae molecular forms

inferredcites →https://doi.org/10.1186/s12859-015-0546-8openalex-snapshot

UrQt: an efficient software for the Unsupervised Quality trimming of NGS data

inferredcites →https://doi.org/10.1186/s13071-015-0794-5openalex-snapshot

Molecular markers for analyses of intraspecific genetic diversity in the Asian Tiger mosquito, Aedes albopictus

inferredcites →https://doi.org/10.1186/s13100-015-0052-6openalex-snapshot

Transposable element polymorphisms recapitulate human evolution

inferredcites →https://doi.org/10.1242/jeb.089508openalex-snapshot

RNA-Seq reveals early distinctions and late convergence of gene expression between diapause and quiescence in the Asian tiger mosquito,Aedes albopictus

inferredcites →https://doi.org/10.1371/journal.pntd.0002681openalex-snapshot

Zika Virus in Gabon (Central Africa) – 2007: A New Threat from Aedes albopictus?

inferredcites →https://doi.org/10.1371/journal.pntd.0003724openalex-snapshot

Global Transcriptional Dynamics of Diapause Induction in Non-Blood-Fed and Blood-Fed Aedes albopictus

inferredcites →https://doi.org/10.1371/journal.pntd.0004543openalex-snapshot

Differential Susceptibilities of Aedes aegypti and Aedes albopictus from the Americas to Zika Virus

inferredcites →https://doi.org/10.1371/journal.pone.0001968openalex-snapshot

High Genetic Differentiation between the M and S Molecular Forms of Anopheles gambiae in Africa

inferredcites →https://doi.org/10.1371/journal.pone.0044515openalex-snapshot

Glacial History of a Modern Invader: Phylogeography and Species Distribution Modelling of the Asian Tiger Mosquito Aedes albopictus

inferredcites →https://doi.org/10.1371/journal.pone.0068586openalex-snapshot

Genetic Analysis of Invasive Aedes albopictus Populations in Los Angeles County, California and Its Potential Public Health Impact

inferredcites →https://doi.org/10.1534/genetics.108.092221openalex-snapshot

A Genome-Scan Method to Identify Selected Loci Appropriate for Both Dominant and Codominant Markers: A Bayesian Perspective

inferredcites →https://doi.org/10.1590/0037-8682-0220-2015openalex-snapshot

Zika virus in Brazil and the danger of infestation by Aedes (Stegomyia) mosquitoes

inferredcites →https://doi.org/10.1603/0013-8746(2002)095[0125:gsoaad]2.0.co;2openalex-snapshot

Genetic Structure of Aedes albopictus (Diptera: Culicidae) Populations Based on Mitochondrial ND5 Sequences: Evidence for an Independent Invasion into Brazil and United States

inferredcites →https://doi.org/10.2503/hortj.mi-ir02openalex-snapshot

Plant Transposable Elements and Their Application to Genetic Analysis via High-throughput Sequencing Platform

inferredcites →https://doi.org/10.3389/fmicb.2015.00970openalex-snapshot

French invasive Asian tiger mosquito populations harbor reduced bacterial microbiota and genetic diversity compared to Vietnamese autochthonous relatives

What points at this work

Incoming claims: where this work appears in other papers’ reference lists and arguments.

inferred← citeshttps://doi.org/10.70675/144b0f62z3829z4346za78bz9dea0f745c7bopenalex-snapshot

Characterizing the genomic determinants and phenotypic responses to altitudinal adaptation in teosintes (Zea mays ssp. parviglumis and ssp. mexicana)

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