On the public citation graph

Omics Discovery Index - Discovering and Linking Public ‘Omics’ Datasets

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Inferred edges come from two machine sources: sweeps of open repository metadata (mostly SSRN and Zenodo), and a bulk OpenAlex citation snapshot. Every row below is labelled with the one it came from. Neither is a complete citation index — absence here is not evidence of absence.

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What this work says

Outgoing claims: the papers this work cites, builds on, or argues with.

inferredcites →https://doi.org/10.1001/jamafacial.2015.0869openalex-snapshot
High-Impact Articles—Citations, Downloads, and Altmetric Score
inferredcites →https://doi.org/10.1002/pmic.201400302openalex-snapshot
Making proteomics data accessible and reusable: Current state of proteomics databases and repositories
inferredcites →https://doi.org/10.1038/527s16aopenalex-snapshot
Perspective: Sustaining the big-data ecosystem
inferredcites →https://doi.org/10.1038/nbt.2839openalex-snapshot
ProteomeXchange provides globally coordinated proteomics data submission and dissemination
inferredcites →https://doi.org/10.1038/nbt.3240openalex-snapshot
Toward effective software solutions for big biology
inferredcites →https://doi.org/10.1038/nbt0604-773openalex-snapshot
Bio-ontologies—fast and furious
inferredcites →https://doi.org/10.1038/nbt0709-579openalex-snapshot
Credit where credit is overdue
inferredcites →https://doi.org/10.1093/jamia/ocv136openalex-snapshot
The NIH Big Data to Knowledge (BD2K) initiative
inferredcites →https://doi.org/10.1093/nar/gkh073openalex-snapshot
Database resources of the National Center for Biotechnology Information: update
inferredcites →https://doi.org/10.1093/nar/gkp440openalex-snapshot
BioPortal: ontologies and integrated data resources at the click of a mouse
inferredcites →https://doi.org/10.1093/nar/gku1061openalex-snapshot
Europe PMC: a full-text literature database for the life sciences and platform for innovation
inferredcites →https://doi.org/10.1093/nar/gkv1290openalex-snapshot
Database resources of the National Center for Biotechnology Information
inferredcites →https://doi.org/10.1186/1471-2105-8-423openalex-snapshot
PubMed related articles: a probabilistic topic-based model for content similarity

What points at this work

Incoming claims: where this work appears in other papers’ reference lists and arguments.

inferred← citeshttps://doi.org/10.1007/164_2016_93openalex-snapshot
Equipping Physiologists with an Informatics Tool Chest: Toward an Integerated Mitochondrial Phenome
inferred← citeshttps://doi.org/10.1016/b978-0-12-809633-8.20251-3openalex-snapshot
Metabolome Analysis
inferred← citeshttps://doi.org/10.1016/b978-0-12-809633-8.20273-2openalex-snapshot
Proteomics Data Representation and Databases
inferred← citeshttps://doi.org/10.1016/j.csbj.2022.11.050openalex-snapshot
A guide to multi-omics data collection and integration for translational medicine
inferred← citeshttps://doi.org/10.1016/j.stress.2023.100301openalex-snapshot
Modern omics toolbox for producing combined and multifactorial abiotic stress tolerant plants
inferred← citeshttps://doi.org/10.1016/j.tibs.2017.01.001openalex-snapshot
A Golden Age for Working with Public Proteomics Data
inferred← citeshttps://doi.org/10.1038/sdata.2017.59openalex-snapshot
DATS, the data tag suite to enable discoverability of datasets
inferred← citeshttps://doi.org/10.1093/database/bax008openalex-snapshot
Workflow and web application for annotating NCBI BioProject transcriptome data
inferred← citeshttps://doi.org/10.1101/101279openalex-snapshot
Uniform resolution of compact identifiers for biomedical data
inferred← citeshttps://doi.org/10.1186/s12859-016-1396-8openalex-snapshot
Microbial phenomics information extractor (MicroPIE): a natural language processing tool for the automated acquisition of prokaryotic phenotypic characters from text sources
inferred← citeshttps://doi.org/10.1186/s40793-022-00433-1openalex-snapshot
Ecosystem-specific microbiota and microbiome databases in the era of big data
inferred← citeshttps://doi.org/10.48550/arxiv.1706.06087openalex-snapshot
Aztec: A Platform to Render Biomedical Software Findable, Accessible, Interoperable, and Reusable
Editorial review for independent work. ICSAC — the Institute for Complexity Science and Advanced Computing — runs a structured editorial panel for researchers publishing outside journals, and publishes on CiteStamp rails. Submission is free and goes through ORCID: icsacinstitute.org/submit.