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Gene expression changes after heat shock of procyclic-form Trypanosoma brucei suggest that stress has a role in differentiation to mammalian-infective forms

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What this work says

Outgoing claims: the papers this work cites, builds on, or argues with.

inferredcites →https://doi.org/10.1002/wrna.1207openalex-snapshot

RNA in development: how ribonucleoprotein granules regulate the life cycles of pathogenic protozoa

inferredcites →https://doi.org/10.1006/expr.1995.1156openalex-snapshot

Heat Shock Does Not Increase the Transcriptional Efficiency of the Hsp 70 Genes of Trypanosoma brucei

inferredcites →https://doi.org/10.1016/j.molbiopara.2014.06.005openalex-snapshot

Networks of gene expression regulation in Trypanosoma brucei

inferredcites →https://doi.org/10.1038/nature12864openalex-snapshot

Genome-wide dissection of the quorum sensing signalling pathway in Trypanosoma brucei

inferredcites →https://doi.org/10.1073/pnas.1019423108openalex-snapshot

Identification of the meiotic life cycle stage of Trypanosoma brucei in the tsetse fly

inferredcites →https://doi.org/10.1079/9780851993003.0000openalex-snapshot

Tsetse Biology and Ecology

inferredcites →https://doi.org/10.1083/jcb.200502088openalex-snapshot

Stress granules and processing bodies are dynamically linked sites of mRNP remodeling

inferredcites →https://doi.org/10.1083/jcb.200512082openalex-snapshot

RNA granules

inferredcites →https://doi.org/10.1083/jcb.200605090openalex-snapshot

Protein tyrosine phosphatase Tb PTP1: a molecular switch controlling life cycle differentiation in trypanosomes

inferredcites →https://doi.org/10.1083/jcb.201506114openalex-snapshot

Molecular control of irreversible bistability during trypanosome developmental commitment

inferredcites →https://doi.org/10.1091/mbc.e13-01-0068openalex-snapshot

SCD6 induces ribonucleoprotein granule formation in trypanosomes in a translation-independent manner, regulated by its Lsm and RGG domains

inferredcites →https://doi.org/10.1093/bioinformatics/btr261openalex-snapshot

DREME: motif discovery in transcription factor ChIP-seq data

inferredcites →https://doi.org/10.1093/nar/gkq237openalex-snapshot

Genome-wide analysis of mRNA abundance in two life-cycle stages of Trypanosoma brucei and identification of splicing and polyadenylation sites

inferredcites →https://doi.org/10.1093/nar/gkt1416openalex-snapshot

Trypanosome MKT1 and the RNA-binding protein ZC3H11: interactions and potential roles in post-transcriptional regulatory networks

inferredcites →https://doi.org/10.1093/nar/gkv731openalex-snapshot

Novel insights into RNP granules by employing the trypanosome's microtubule skeleton as a molecular sieve

inferredcites →https://doi.org/10.1098/rsob.120033openalex-snapshot

Genome organization is a major component of gene expression control in response to stress and during the cell division cycle in trypanosomes

inferredcites →https://doi.org/10.1098/rstb.2014.0288openalex-snapshot

The within-host dynamics of African trypanosome infections

inferredcites →https://doi.org/10.1101/gad.570310openalex-snapshot

A novel phosphatase cascade regulates differentiation in Trypanosoma brucei via a glycosomal signaling pathway

inferredcites →https://doi.org/10.1111/cmi.12268openalex-snapshot

The emerging role of RNA-binding proteins in the life cycle ofTrypanosoma brucei

inferredcites →https://doi.org/10.1111/j.1365-2958.2012.07988.xopenalex-snapshot

Expression of the RNA recognition motif protein RBP10 promotes a bloodstream‐form transcript pattern in Trypanosoma brucei

inferredcites →https://doi.org/10.1111/mmi.12764openalex-snapshot

Transcriptome‐wide analysis of trypanosome mRNA decay reveals complex degradation kinetics and suggests a role for co‐transcriptional degradation in determining mRNA levels

inferredcites →https://doi.org/10.1126/science.1229641openalex-snapshot

Developmental Progression to Infectivity in Trypanosoma brucei Triggered by an RNA-Binding Protein

inferredcites →https://doi.org/10.1186/1471-2164-10-495openalex-snapshot

Transcriptome analysis of differentiating trypanosomes reveals the existence of multiple post-transcriptional regulons

inferredcites →https://doi.org/10.1186/1471-2164-15-911openalex-snapshot

Extensive stage-regulation of translation revealed by ribosome profiling of Trypanosoma brucei

inferredcites →https://doi.org/10.1186/gb-2009-10-3-r25openalex-snapshot

Ultrafast and memory-efficient alignment of short DNA sequences to the human genome

inferredcites →https://doi.org/10.1186/gb-2010-11-10-r106openalex-snapshot

Differential expression analysis for sequence count data

inferredcites →https://doi.org/10.1186/s12864-015-2338-yopenalex-snapshot

Transcriptomes of newly-isolated Trypanosoma brucei rhodesiense reveal hundreds of mRNAs that are co-regulated with stumpy-form markers

inferredcites →https://doi.org/10.1186/s12864-016-2624-3openalex-snapshot

Integrative analysis of the Trypanosoma brucei gene expression cascade predicts differential regulation of mRNA processing and unusual control of ribosomal protein expression

inferredcites →https://doi.org/10.1242/jcs.031823openalex-snapshot

Heat shock causes a decrease in polysomes and the appearance of stress granules in trypanosomes independently of eIF2α phosphorylation at Thr169

inferredcites →https://doi.org/10.1371/journal.pntd.0002649openalex-snapshot

Insights into the Trypanosome-Host Interactions Revealed through Transcriptomic Analysis of Parasitized Tsetse Fly Salivary Glands

inferredcites →https://doi.org/10.1371/journal.pone.0018425openalex-snapshot

The Cell Cycle Regulated Transcriptome of Trypanosoma brucei

inferredcites →https://doi.org/10.1371/journal.pone.0036619openalex-snapshot

Comparative SILAC Proteomic Analysis of Trypanosoma brucei Bloodstream and Procyclic Lifecycle Stages

inferredcites →https://doi.org/10.1371/journal.pone.0054004openalex-snapshot

Differential Localization of the Two T. brucei Poly(A) Binding Proteins to the Nucleus and RNP Granules Suggests Binding to Distinct mRNA Pools

inferredcites →https://doi.org/10.1371/journal.pone.0135973openalex-snapshot

Polysomes of Trypanosoma brucei: Association with Initiation Factors and RNA-Binding Proteins

inferredcites →https://doi.org/10.1371/journal.ppat.1003286openalex-snapshot

Post-Transcriptional Regulation of the Trypanosome Heat Shock Response by a Zinc Finger Protein

inferredcites →https://doi.org/10.1371/journal.ppat.1005439openalex-snapshot

Quantitative Proteomics Uncovers Novel Factors Involved in Developmental Differentiation of Trypanosoma brucei

inferredcites →https://doi.org/10.1371/journal.ppat.1005514openalex-snapshot

Regulating a Post-Transcriptional Regulator: Protein Phosphorylation, Degradation and Translational Blockage in Control of the Trypanosome Stress-Response RNA-Binding Protein ZC3H11

inferredcites →https://doi.org/10.2217/fmb.11.20openalex-snapshot

Trans -Splicing in Trypanosomes: Machinery and Its Impact on the Parasite Transcriptome

inferredcites →https://doi.org/10.3389/fcimb.2013.00053openalex-snapshot

Through the dark continent: African trypanosome development in the tsetse fly

inferredcites →https://doi.org/10.3389/fcimb.2013.00078openalex-snapshot

Bloodstream form pre-adaptation to the tsetse fly in Trypanosoma brucei

inferredcites →https://doi.org/10.4161/15476286.2014.972208openalex-snapshot

mRNP granules

What points at this work

Incoming claims: where this work appears in other papers’ reference lists and arguments.

inferred← citeshttps://doi.org/10.1371/journal.ppat.1006560openalex-snapshot

Expression of the RNA-binding protein RBP10 promotes the bloodstream-form differentiation state in Trypanosoma brucei

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