On the public citation graph

Discovery of Cancer Driver Long Noncoding RNAs across 1112 Tumour Genomes: New Candidates and Distinguishing Features

https://doi.org/10.1101/065805
0 signed · 64 inferred · view as graph

Inferred edges come from two machine sources: sweeps of open repository metadata (mostly SSRN and Zenodo), and a bulk OpenAlex citation snapshot. Every row below is labelled with the one it came from. Neither is a complete citation index — absence here is not evidence of absence.

Is this your work? Sign in with ORCID and put your name on the claims that are yours.
Claim with ORCID
Reference health. See whether every reference in this work resolves to a known work and none has been retracted — and get a dated CiteStamped badge you can embed.
See reference health

What this work says

Outgoing claims: the papers this work cites, builds on, or argues with.

inferredcites →https://doi.org/10.1002/gepi.20164openalex-snapshot
Stratified false discovery control for large‐scale hypothesis testing with application to genome‐wide association studies
inferredcites →https://doi.org/10.1007/s10620-011-1989-zopenalex-snapshot
Inactivation of MYO5B Promotes Invasion and Motility in Gastric Cancer Cells
inferredcites →https://doi.org/10.1016/j.bbrc.2012.10.116openalex-snapshot
ANKRD18A as a novel epigenetic regulation gene in lung cancer
inferredcites →https://doi.org/10.1016/j.ccell.2015.09.006openalex-snapshot
Comprehensive Genomic Characterization of Long Non-coding RNAs across Human Cancers
inferredcites →https://doi.org/10.1016/j.cell.2010.06.040openalex-snapshot
A Large Intergenic Noncoding RNA Induced by p53 Mediates Global Gene Repression in the p53 Response
inferredcites →https://doi.org/10.1016/j.cell.2012.06.024openalex-snapshot
A Landscape of Driver Mutations in Melanoma
inferredcites →https://doi.org/10.1016/j.cell.2013.06.020openalex-snapshot
lincRNAs: Genomics, Evolution, and Mechanisms
inferredcites →https://doi.org/10.1016/j.celrep.2015.04.023openalex-snapshot
Principles of Long Noncoding RNA Evolution Derived from Direct Comparison of Transcriptomes in 17 Species
inferredcites →https://doi.org/10.1038/nature08975openalex-snapshot
Long non-coding RNA HOTAIR reprograms chromatin state to promote cancer metastasis
inferredcites →https://doi.org/10.1038/nature08987openalex-snapshot
International network of cancer genome projects
inferredcites →https://doi.org/10.1038/nature10887openalex-snapshot
Modular regulatory principles of large non-coding RNAs
inferredcites →https://doi.org/10.1038/nature11247openalex-snapshot
An integrated encyclopedia of DNA elements in the human genome
inferredcites →https://doi.org/10.1038/nature12213openalex-snapshot
Mutational heterogeneity in cancer and the search for new cancer-associated genes
inferredcites →https://doi.org/10.1038/nature12477openalex-snapshot
Signatures of mutational processes in human cancer
inferredcites →https://doi.org/10.1038/nature17161openalex-snapshot
Melanoma addiction to the long non-coding RNA SAMMSON
inferredcites →https://doi.org/10.1038/nbt.1754openalex-snapshot
Integrative genomics viewer
inferredcites →https://doi.org/10.1038/ncomms10001openalex-snapshot
A comprehensive assessment of somatic mutation detection in cancer using whole-genome sequencing
inferredcites →https://doi.org/10.1038/ncomms6812openalex-snapshot
Genome-wide analysis of the human p53 transcriptional network unveils a lncRNA tumour suppressor signature
inferredcites →https://doi.org/10.1038/ng.2764openalex-snapshot
The Cancer Genome Atlas Pan-Cancer analysis project
inferredcites →https://doi.org/10.1038/ng.2983openalex-snapshot
Whole-genome sequencing and comprehensive molecular profiling identify new driver mutations in gastric cancer
inferredcites →https://doi.org/10.1038/ng.3192openalex-snapshot
The landscape of long noncoding RNAs in the human transcriptome
inferredcites →https://doi.org/10.1038/ng.3547openalex-snapshot
Whole-genome mutational landscape and characterization of noncoding and structural mutations in liver cancer
inferredcites →https://doi.org/10.1038/ng.3568openalex-snapshot
Pancreatic cancer risk variant in LINC00673 creates a miR-1231 binding site and interferes with PTPN11 degradation
inferredcites →https://doi.org/10.1038/nmeth.2642openalex-snapshot
IntOGen-mutations identifies cancer drivers across tumor types
inferredcites →https://doi.org/10.1038/nrc1299openalex-snapshot
A census of human cancer genes
inferredcites →https://doi.org/10.1038/nsmb.2591openalex-snapshot
Integrative genomic analyses reveal clinically relevant long noncoding RNAs in human cancer
inferredcites →https://doi.org/10.1038/srep02650openalex-snapshot
Comprehensive identification of mutational cancer driver genes across 12 tumor types
inferredcites →https://doi.org/10.1093/bioinformatics/btt016openalex-snapshot
Grape RNA-Seq analysis pipeline environment
inferredcites →https://doi.org/10.1093/bioinformatics/btt395openalex-snapshot
OncodriveCLUST: exploiting the positional clustering of somatic mutations to identify cancer genes
inferredcites →https://doi.org/10.1093/nar/gks1099openalex-snapshot
LncRNADisease: a database for long-non-coding RNA-associated diseases
inferredcites →https://doi.org/10.1093/nar/gks743openalex-snapshot
Functional impact bias reveals cancer drivers
inferredcites →https://doi.org/10.1093/nar/gkt006openalex-snapshot
CPAT: Coding-Potential Assessment Tool using an alignment-free logistic regression model
inferredcites →https://doi.org/10.1101/gr.132159.111openalex-snapshot
The GENCODE v7 catalog of human long noncoding RNAs: Analysis of their gene structure, evolution, and expression
inferredcites →https://doi.org/10.1101/gr.135350.111openalex-snapshot
GENCODE: The reference human genome annotation for The ENCODE Project
inferredcites →https://doi.org/10.1101/gr.152132.112openalex-snapshot
Transcriptome characterization by RNA sequencing identifies a major molecular and clinical subdivision in chronic lymphocytic leukemia
inferredcites →https://doi.org/10.1186/1471-2164-15-583openalex-snapshot
Transcriptional landscape of repetitive elements in normal and cancer human cells
inferredcites →https://doi.org/10.1186/1471-2164-7-3openalex-snapshot
Structural and functional properties of genes involved in human cancer
inferredcites →https://doi.org/10.1186/gb-2013-14-11-r131openalex-snapshot
Chromatin signatures at transcriptional start sites separate two equally populated yet distinct classes of intergenic long noncoding RNAs
inferredcites →https://doi.org/10.1186/s13059-016-0932-1openalex-snapshot
Single-cell analysis of long non-coding RNAs in the developing human neocortex
inferredcites →https://doi.org/10.1261/rna.044560.114openalex-snapshot
The RIDL hypothesis: transposable elements as functional domains of long noncoding RNAs
inferredcites →https://doi.org/10.1261/rna.044891.114openalex-snapshot
RNAMotifScanX: a graph alignment approach for RNA structural motif identification
inferredcites →https://doi.org/10.1261/rna.047324.114openalex-snapshot
Unexpected selection to retain high GC content and splicing enhancers within exons of multiexonic lncRNA loci
inferredcites →https://doi.org/10.1371/journal.pgen.1003569openalex-snapshot
Pervasive Transcription of the Human Genome Produces Thousands of Previously Unidentified Long Intergenic Noncoding RNAs
inferredcites →https://doi.org/10.1371/journal.pone.0080306openalex-snapshot
Comprehensive Analysis of Long Non-Coding RNAs in Ovarian Cancer Reveals Global Patterns and Targeted DNA Amplification
inferredcites →https://doi.org/10.1371/journal.pone.0141139openalex-snapshot
The Profile of Heparanase Expression Distinguishes Differentiated Thyroid Carcinoma from Benign Neoplasms
inferredcites →https://doi.org/10.3389/fgene.2014.00011openalex-snapshot
Exploring the potential benefits of stratified false discovery rates for region-based testing of association with rare genetic variation
inferredcites →https://doi.org/10.4161/rna.20481openalex-snapshot
The hallmarks of cancer

What points at this work

Incoming claims: where this work appears in other papers’ reference lists and arguments.

inferred← citeshttps://doi.org/10.1016/j.neuint.2022.105467openalex-snapshot
Non-coding RNAs in stroke pathology, diagnostics, and therapeutics
inferred← citeshttps://doi.org/10.1038/s41416-024-02870-wopenalex-snapshot
Melanoma-specific mutation hotspots in distal, non-coding, promoter-interacting regions implicate novel candidate driver genes
inferred← citeshttps://doi.org/10.1038/s41418-019-0362-1openalex-snapshot
ALDH1A3-regulated long non-coding RNA NRAD1 is a potential novel target for triple-negative breast tumors and cancer stem cells
inferred← citeshttps://doi.org/10.1038/s41467-020-20887-6openalex-snapshot
Whole genome sequencing of metastatic colorectal cancer reveals prior treatment effects and specific metastasis features
inferred← citeshttps://doi.org/10.1038/s41568-021-00371-zopenalex-snapshot
Non-coding driver mutations in human cancer
inferred← citeshttps://doi.org/10.1038/s41588-024-01916-2openalex-snapshot
Aneuploidy as a driver of human cancer
inferred← citeshttps://doi.org/10.1038/s41598-018-21663-9openalex-snapshot
Genomics of a pediatric ovarian fibrosarcoma. Association with the DICER1 syndrome
inferred← citeshttps://doi.org/10.1101/237313openalex-snapshot
Discovery and characterization of coding and non-coding driver mutations in more than 2,500 whole cancer genomes
inferred← citeshttps://doi.org/10.1186/s12864-020-07172-yopenalex-snapshot
circVAR database: genome-wide archive of genetic variants for human circular RNAs
inferred← citeshttps://doi.org/10.18632/oncotarget.16473openalex-snapshot
Accuracy of the urine UCA1 for diagnosis of bladder cancer: a meta-analysis
inferred← citeshttps://doi.org/10.18632/oncotarget.26225openalex-snapshot
Transcriptomic and genomic profiling of early-stage ovarian carcinomas associated with histotype and overall survival
inferred← citeshttps://doi.org/10.20944/preprints202102.0234.v1openalex-snapshot
Principal Component Analysis of RNA-seq Data Unveils a Novel Prostate Cancer-Associated Gene Expression Signature
inferred← citeshttps://doi.org/10.21203/rs.3.rs-1481666/v1openalex-snapshot
Tumour mutations in long noncoding RNAs enhance cell fitness
inferred← citeshttps://doi.org/10.24875/rmu.19000040openalex-snapshot
Overview of long non-coding RNA and its role in breast cancer
inferred← citeshttps://doi.org/10.33696/pathology.3.039openalex-snapshot
Differential Expression of Long Non-coding Ribonucleic Acid (RNA) Genes in Endometriosis-associated Ovarian Cancer (EAOC): A Pilot Meta-analysis for Pathological Insights and Potential Diagnostic Biomarker Identification
inferred← citeshttps://doi.org/10.3892/ijo.2019.4891openalex-snapshot
The long non-coding RNA GHSROS facilitates breast cancer cell migration and orthotopic xenograft tumour growth
inferred← citeshttps://doi.org/10.3969/j.issn.1673-4254.2018.06.14openalex-snapshot
[Analysis of orthologous lncRNAs in humans and mice and their species-specific epigenetic target genes].
Editorial review for independent work. ICSAC — the Institute for Complexity Science and Advanced Computing — runs a structured editorial panel for researchers publishing outside journals, and publishes on CiteStamp rails. Submission is free and goes through ORCID: icsacinstitute.org/submit.