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Next generation whole genome sequencing of Plasmodium falciparum using NextSeq500 technology in India

https://doi.org/10.1101/068676
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What this work says

Outgoing claims: the papers this work cites, builds on, or argues with.

inferredcites →https://doi.org/10.1016/j.cell.2011.10.051openalex-snapshot
Endoplasmic Reticulum PI(3)P Lipid Binding Targets Malaria Proteins to the Host Cell
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Polymorphisms in Pfcrt and Pfmdr-1 genes after five years withdrawal of chloroquine for the treatment of Plasmodium falciparum malaria in West Bengal, India
inferredcites →https://doi.org/10.1038/nature11174openalex-snapshot
Analysis of Plasmodium falciparum diversity in natural infections by deep sequencing
inferredcites →https://doi.org/10.1038/nature12876openalex-snapshot
A molecular marker of artemisinin-resistant Plasmodium falciparum malaria
inferredcites →https://doi.org/10.1038/ng.2373openalex-snapshot
The malaria parasite Plasmodium vivax exhibits greater genetic diversity than Plasmodium falciparum
inferredcites →https://doi.org/10.1038/ng.3189openalex-snapshot
Genetic architecture of artemisinin-resistant Plasmodium falciparum
inferredcites →https://doi.org/10.1038/srep03318openalex-snapshot
Genome-wide screen identifies new candidate genes associated with artemisinin susceptibility in Plasmodium falciparum in Kenya
inferredcites →https://doi.org/10.1056/nejmoa1505819openalex-snapshot
Genetic Diversity and Protective Efficacy of the RTS,S/AS01 Malaria Vaccine
inferredcites →https://doi.org/10.1073/pnas.1505691112openalex-snapshot
Modeling malaria genomics reveals transmission decline and rebound in Senegal
inferredcites →https://doi.org/10.1093/infdis/jis329openalex-snapshot
Use of Massively Parallel Pyrosequencing to Evaluate the Diversity of and Selection on Plasmodium falciparum csp T-Cell Epitopes in Lilongwe, Malawi
inferredcites →https://doi.org/10.1093/infdis/jiu575openalex-snapshot
Clonal Outbreak ofPlasmodium falciparumInfection in Eastern Panama
inferredcites →https://doi.org/10.1093/molbev/mss161openalex-snapshot
Genomic Sequencing of Plasmodium falciparum Malaria Parasites from Senegal Reveals the Demographic History of the Population
inferredcites →https://doi.org/10.1126/science.1215966openalex-snapshot
A Major Genome Region Underlying Artemisinin Resistance in Malaria
inferredcites →https://doi.org/10.1126/science.1260867openalex-snapshot
K13-propeller mutations confer artemisinin resistance in Plasmodium falciparum clinical isolates
inferredcites →https://doi.org/10.1128/aac.04632-14openalex-snapshot
Surveillance of Artemisinin Resistance in Plasmodium falciparum in India Using the kelch13 Molecular Marker
inferredcites →https://doi.org/10.1128/jcm.00235-16openalex-snapshot
A Method for Amplicon Deep Sequencing of Drug Resistance Genes in Plasmodium falciparum Clinical Isolates from India
inferredcites →https://doi.org/10.1186/1475-2875-14-4openalex-snapshot
COIL: a methodology for evaluating malarial complexity of infection using likelihood from single nucleotide polymorphism data
inferredcites →https://doi.org/10.1186/1475-2875-7-223openalex-snapshot
A general SNP-based molecular barcode for Plasmodium falciparum identification and tracking
inferredcites →https://doi.org/10.1186/gb-2008-9-12-r171openalex-snapshot
Genome-wide SNP genotyping highlights the role of natural selection in Plasmodium falciparumpopulation divergence
inferredcites →https://doi.org/10.1186/gb-2011-12-4-r35openalex-snapshot
An optimized microarray platform for assaying genomic variation in Plasmodium falciparum field populations
inferredcites →https://doi.org/10.1186/s12936-015-1044-1openalex-snapshot
Spatially variable risk factors for malaria in a geographically heterogeneous landscape, western Kenya: an explorative study
inferredcites →https://doi.org/10.1186/s12936-015-1053-0openalex-snapshot
In vitro adaptation of Plasmodium falciparum reveal variations in cultivability
inferredcites →https://doi.org/10.1371/journal.pone.0020251openalex-snapshot
Population Genetic Analysis of Plasmodium falciparum Parasites Using a Customized Illumina GoldenGate Genotyping Assay
inferredcites →https://doi.org/10.3347/kjp.2014.52.1.99openalex-snapshot
Whole Mitochondrial Genome Sequence of an Indian Plasmodium falciparum Field Isolate
inferredcites →https://doi.org/10.4269/ajtmh.2012.11-0478openalex-snapshot
Next Generation Sequencing to Detect Variation in the Plasmodium falciparum Circumsporozoite Protein

What points at this work

Incoming claims: where this work appears in other papers’ reference lists and arguments.

inferred← citeshttps://doi.org/10.22364/eeb.20.19openalex-snapshot
Insights into the core bacterial consortia of root endophytes in two cultivated varieties of rice in West Bengal
inferred← citeshttps://doi.org/10.4103/jacm.jacm_14_22openalex-snapshot
Introduction to genome sequencing, principles and its applications to a diagnostic medical microbiology laboratory
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