On the public citation graph
In-field metagenome and 16S rRNA gene amplicon nanopore sequencing robustly characterize glacier microbiota
0 signed · 108 inferred · view as graph
Inferred edges come from two machine sources: sweeps of open repository metadata (mostly SSRN and Zenodo), and a bulk OpenAlex citation snapshot. Every row below is labelled with the one it came from. Neither is a complete citation index — absence here is not evidence of absence.
Is this your work? Sign in with ORCID and put your name on the
claims that are yours.
Reference health. See whether every reference in this work resolves to a
known work and none has been retracted — and get a dated CiteStamped
badge you can embed.
What this work says
Outgoing claims: the papers this work cites, builds on, or argues with.
inferredcites →https://doi.org/10.1002/2016jg003694openalex-snapshot
Microbes influence the biogeochemical and optical properties of maritime Antarctic snow
inferredcites →https://doi.org/10.1016/j.jhydrol.2011.09.001openalex-snapshot
Hydrology and hydrochemistry of a deglaciating high-Arctic catchment, Svalbard
inferredcites →https://doi.org/10.1029/2011rg000361openalex-snapshot
Clean access, measurement, and sampling of Ellsworth Subglacial Lake: A method for exploring deep Antarctic subglacial lake environments
inferredcites →https://doi.org/10.1038/ismej.2010.100openalex-snapshot
Possible interactions between bacterial diversity, microbial activity and supraglacial hydrology of cryoconite holes in Svalbard
inferredcites →https://doi.org/10.1038/ismej.2010.108openalex-snapshot
Microbial ecosystem responses to rapid climate change in the Arctic
inferredcites →https://doi.org/10.1038/ismej.2016.45openalex-snapshot
Challenges in microbial ecology: building predictive understanding of community function and dynamics
inferredcites →https://doi.org/10.1038/nature02340openalex-snapshot
Community structure and metabolism through reconstruction of microbial genomes from the environment
inferredcites →https://doi.org/10.1038/nature12352openalex-snapshot
Insights into the phylogeny and coding potential of microbial dark matter
inferredcites →https://doi.org/10.1038/nature13667openalex-snapshot
A microbial ecosystem beneath the West Antarctic ice sheet
inferredcites →https://doi.org/10.1038/nature16996openalex-snapshot
Real-time, portable genome sequencing for Ebola surveillance
inferredcites →https://doi.org/10.1038/nature24621openalex-snapshot
A communal catalogue reveals Earth’s multiscale microbial diversity
inferredcites →https://doi.org/10.1038/ncomms11257openalex-snapshot
Fast and sensitive taxonomic classification for metagenomics with Kaiju
inferredcites →https://doi.org/10.1038/nmicrobiol.2016.48openalex-snapshot
A new view of the tree of life
inferredcites →https://doi.org/10.1038/nrg.2017.88openalex-snapshot
Towards a genomics-informed, real-time, global pathogen surveillance system
inferredcites →https://doi.org/10.1038/nrmicro1455openalex-snapshot
Microbial ecologists: it's time to 'go large'
inferredcites →https://doi.org/10.1038/s41598-017-18364-0openalex-snapshot
Nanopore DNA Sequencing and Genome Assembly on the International Space Station
inferredcites →https://doi.org/10.1038/srep16350openalex-snapshot
Sample storage conditions significantly influence faecal microbiome profiles
inferredcites →https://doi.org/10.1073/pnas.1619807114openalex-snapshot
Glacier shrinkage driving global changes in downstream systems
inferredcites →https://doi.org/10.1088/1748-9326/8/3/035003openalex-snapshot
A metagenomic snapshot of taxonomic and functional diversity in an alpine glacier cryoconite ecosystem
inferredcites →https://doi.org/10.1093/bioinformatics/btu590openalex-snapshot
poRe: an R package for the visualization and analysis of nanopore sequencing data
inferredcites →https://doi.org/10.1093/femsec/fiw127openalex-snapshot
Microbial community variation in cryoconite granules on Qaanaaq Glacier, NW Greenland
inferredcites →https://doi.org/10.1093/gigascience/giw015openalex-snapshot
Estimating the total number of phosphoproteins and phosphorylation sites in eukaryotic proteomes
inferredcites →https://doi.org/10.1093/gigascience/gix007openalex-snapshot
MinION™ nanopore sequencing of environmental metagenomes: a synthetic approach
inferredcites →https://doi.org/10.1093/gigascience/giy140openalex-snapshot
NanoAmpli-Seq: a workflow for amplicon sequencing for mixed microbial communities on the nanopore sequencing platform
inferredcites →https://doi.org/10.1101/074161openalex-snapshot
SINTAX: a simple non-Bayesian taxonomy classifier for 16S and ITS sequences
inferredcites →https://doi.org/10.1111/1462-2920.12635openalex-snapshot
Microbial biogeography: the end of the ubiquitous dispersal hypothesis?
inferredcites →https://doi.org/10.1111/1462-2920.13349openalex-snapshot
Metabolome‐mediated biocryomorphic evolution promotes carbon fixation in G reenlandic cryoconite holes
inferredcites →https://doi.org/10.1111/1462-2920.13494openalex-snapshot
Linking microbial diversity and functionality of arctic glacial surface habitats
inferredcites →https://doi.org/10.1111/1462-2920.13766openalex-snapshot
Microbial ecology of mountain glacier ecosystems: biodiversity, ecological connections and implications of a warming climate
inferredcites →https://doi.org/10.1111/1574-6941.12283openalex-snapshot
Coupled cryoconite ecosystem structure-function relationships are revealed by comparing bacterial communities in alpine and Arctic glaciers
inferredcites →https://doi.org/10.1111/1758-2229.12246openalex-snapshot
Different bulk and active bacterial communities in cryoconite from the margin and interior of the G reenland ice sheet
inferredcites →https://doi.org/10.1111/j.1365-2486.2008.01758.xopenalex-snapshot
High microbial activity on glaciers: importance to the global carbon cycle
inferredcites →https://doi.org/10.1111/j.1574-6941.2011.01277.xopenalex-snapshot
Structure and diversity of bacterial, eukaryotic and archaeal communities in glacial cryoconite holes from the Arctic and the Antarctic
inferredcites →https://doi.org/10.1111/jbi.13089openalex-snapshot
Biogeography of cryoconite forming cyanobacteria on polar and Asian glaciers
inferredcites →https://doi.org/10.1111/mec.13098openalex-snapshot
Microbial dynamics in glacier forefield soils show succession is not just skin deep
inferredcites →https://doi.org/10.1111/mec.13715openalex-snapshot
Taxon interactions control the distributions of cryoconite bacteria colonizing a High Arctic ice cap
inferredcites →https://doi.org/10.1126/science.1153213openalex-snapshot
The Microbial Engines That Drive Earth's Biogeochemical Cycles
inferredcites →https://doi.org/10.1128/jb.01254-09openalex-snapshot
Genome sequence of the Fleming strain of Micrococcus luteus, a simple free-living actinobacterium.
inferredcites →https://doi.org/10.1128/jb.173.14.4371-4378.1991openalex-snapshot
Analysis of a marine picoplankton community by 16S rRNA gene cloning and sequencing
inferredcites →https://doi.org/10.1128/jcm.40.8.2779-2785.2002openalex-snapshot
Phylogenetic Analysis of Salmonella , Shigella , and Escherichia coli Strains on the Basis of the gyrB Gene Sequence
inferredcites →https://doi.org/10.1186/2042-5783-1-5openalex-snapshot
The importance of metagenomic surveys to microbial ecology: or why Darwin would have been a metagenomic scientist
inferredcites →https://doi.org/10.1186/s12915-014-0087-zopenalex-snapshot
Reagent and laboratory contamination can critically impact sequence-based microbiome analyses
inferredcites →https://doi.org/10.1186/s13742-016-0140-7openalex-snapshot
INC-Seq: accurate single molecule reads using nanopore sequencing
inferredcites →https://doi.org/10.1186/s40168-017-0336-9openalex-snapshot
Profiling bacterial communities by MinION sequencing of ribosomal operons
inferredcites →https://doi.org/10.1371/journal.pone.0085105openalex-snapshot
Metabolic Flexibility as a Major Predictor of Spatial Distribution in Microbial Communities
inferredcites →https://doi.org/10.3189/172756410791386427openalex-snapshot
A virtual network for estimating daily new snow water equivalent and snow depth in the Swiss Alps
inferredcites →https://doi.org/10.3189/172756411795932083openalex-snapshot
The microstructure and biogeochemistry of Arctic cryoconite granules
inferredcites →https://doi.org/10.3189/172756411795932092openalex-snapshot
Carbon fluxes through bacterial communities on glacier surfaces
inferredcites →https://doi.org/10.3389/feart.2015.00012openalex-snapshot
Coming in from the cold: potential microbial threats from the terrestrial cryosphere
inferredcites →https://doi.org/10.3389/fmicb.2015.00193openalex-snapshot
Stable microbial community composition on the Greenland Ice Sheet
inferredcites →https://doi.org/10.3389/fmicb.2017.02594openalex-snapshot
In Situ Field Sequencing and Life Detection in Remote (79°26′N) Canadian High Arctic Permafrost Ice Wedge Microbial Communities
inferredcites →https://doi.org/10.4236/oje.2015.58033openalex-snapshot
Partial Formalization: An Approach for Critical Analysis of Definitions and Methods Used in Bulk Extraction-Based Molecular Microbial Ecology
inferredcites →https://doi.org/10.7171/jbt.17-2801-009openalex-snapshot
Real-Time DNA Sequencing in the Antarctic Dry Valleys Using the Oxford Nanopore Sequencer
What points at this work
Incoming claims: where this work appears in other papers’ reference lists and arguments.
inferred← citeshttps://doi.org/10.1002/9781119551713.ch21openalex-snapshot
Fog Computing for Bioinformatics Applications
inferred← citeshttps://doi.org/10.1007/978-3-319-57057-0_16openalex-snapshot
Metagenomic Analysis of Low-Temperature Environments
inferred← citeshttps://doi.org/10.1007/978-3-319-57057-0_6openalex-snapshot
Viruses in Glacial Environments
inferred← citeshttps://doi.org/10.1016/b978-0-323-85455-9.00014-xopenalex-snapshot
Metagenomic approaches to study the culture-independent bacterial diversity of a polluted environment—a case study on north-eastern coast of Bay of Bengal, India
inferred← citeshttps://doi.org/10.1016/b978-0-323-91601-1.00007-9openalex-snapshot
Metagenomics: A resilience approach to climate change and conservation of the African Glacier biodiversity
inferred← citeshttps://doi.org/10.1016/bs.coac.2018.06.001openalex-snapshot
RNA-Seq Data Analysis, Applications and Challenges
inferred← citeshttps://doi.org/10.1016/j.algal.2021.102456openalex-snapshot
Characterizing algal microbiomes using long-read nanopore sequencing
inferred← citeshttps://doi.org/10.1016/j.csbj.2020.01.005openalex-snapshot
Computational methods for 16S metabarcoding studies using Nanopore sequencing data
inferred← citeshttps://doi.org/10.1016/j.csbj.2020.05.014openalex-snapshot
SEQU-INTO: Early detection of impurities, contamination and off-targets (ICOs) in long read/MinION sequencing
inferred← citeshttps://doi.org/10.1016/j.scitotenv.2020.142867openalex-snapshot
RETRACTED: The wastewater microbiome: A novel insight for COVID-19 surveillance
inferred← citeshttps://doi.org/10.1038/nrg.2017.88openalex-snapshot
Towards a genomics-informed, real-time, global pathogen surveillance system
inferred← citeshttps://doi.org/10.1038/s41587-021-01108-xopenalex-snapshot
Nanopore sequencing technology, bioinformatics and applications
inferred← citeshttps://doi.org/10.1038/s41598-017-08461-5openalex-snapshot
Field-based species identification of closely-related plants using real-time nanopore sequencing
inferred← citeshttps://doi.org/10.1038/s41598-020-59747-0openalex-snapshot
Nanopore sequencing of microbial communities reveals the potential role of sea lice as a reservoir for fish pathogens
inferred← citeshttps://doi.org/10.1039/9781782628217-00038openalex-snapshot
Introduction to Genomic Diagnostics
inferred← citeshttps://doi.org/10.1042/bst20210706openalex-snapshot
Challenges and approaches to studying pore-forming proteins
inferred← citeshttps://doi.org/10.1080/03014223.2021.1900299openalex-snapshot
Environmental DNA as a tool for monitoring Antarctic vertebrates
inferred← citeshttps://doi.org/10.1080/23818107.2023.2267661openalex-snapshot
Pool-Seq genomic based analytical approaches can yield novel insights into unculturable taxa: an example from the red snow algae Sanguina nivaloides
inferred← citeshttps://doi.org/10.1093/biomethods/bpaa016openalex-snapshot
A lab in the field: applications of real-time, in situ metagenomic sequencing
inferred← citeshttps://doi.org/10.1093/femsec/fiaa102openalex-snapshot
Enhanced microbial degradation of irradiated cellulose under hyperalkaline conditions
inferred← citeshttps://doi.org/10.1093/gigascience/giy033openalex-snapshot
Real-time DNA barcoding in a rainforest using nanopore sequencing: opportunities for rapid biodiversity assessments and local capacity building
inferred← citeshttps://doi.org/10.1099/mgen.0.000375openalex-snapshot
Microbial genomics amidst the Arctic crisis
inferred← citeshttps://doi.org/10.1101/107656openalex-snapshot
Field-based species identification in eukaryotes using real-time nanopore sequencing
inferred← citeshttps://doi.org/10.1101/2020.08.25.267591openalex-snapshot
A computational strategy for rapid on-site 16S metabarcoding with Oxford Nanopore sequencing
inferred← citeshttps://doi.org/10.1101/2021.07.28.454187openalex-snapshot
Molecular surveillance of zoonotic bacterial pathogens in farm dwelling peridomestic rodents across the upper Midwest, USA
inferred← citeshttps://doi.org/10.1109/tcbb.2022.3172661openalex-snapshot
Identifying Taxonomic Units in Metagenomic DNA Streams on Mobile Devices
inferred← citeshttps://doi.org/10.1111/1755-0998.13588openalex-snapshot
High molecular weight DNA extraction strategies for long‐read sequencing of complex metagenomes
inferred← citeshttps://doi.org/10.1111/1758-2229.12732openalex-snapshot
On‐site sequencing speeds up and re‐directs field‐based microbiology
inferred← citeshttps://doi.org/10.1128/aem.00097-20openalex-snapshot
Salmonella enterica and Escherichia coli in Wheat Flour: Detection and Serotyping by a Quasimetagenomic Approach Assisted by Magnetic Capture, Multiple-Displacement Amplification, and Real-Time Sequencing
inferred← citeshttps://doi.org/10.1134/s2635167624600470openalex-snapshot
Comparative Metagenomics for Monitoring the Hidden Dynamics of the Algal-Bacterial Wastewater Community under the Influence of Drugs
inferred← citeshttps://doi.org/10.1145/3177102.3177114openalex-snapshot
Applications and Challenges of Real-time Mobile DNA Analysis
inferred← citeshttps://doi.org/10.11606/issn.1679-9836.v100i1p62-69openalex-snapshot
Impressão 3D na medicina legal e resolução de crimes: revisão integrativa da literatura
inferred← citeshttps://doi.org/10.1177/15311074251413229openalex-snapshot
The Microbial Inhabitants of the Corona Lava Tube: Astrobiological Insights from a Mars Analog Environment
inferred← citeshttps://doi.org/10.1186/s12859-021-04089-5openalex-snapshot
BugSeq: a highly accurate cloud platform for long-read metagenomic analyses
inferred← citeshttps://doi.org/10.1186/s12915-017-0473-4openalex-snapshot
De novo assembly of the complex genome of Nippostrongylus brasiliensis using MinION long reads
inferred← citeshttps://doi.org/10.12688/f1000research.10545.1openalex-snapshot
Annotated mitochondrial genome with Nanopore R9 signal for Nippostrongylus brasiliensis
inferred← citeshttps://doi.org/10.1371/journal.pbio.3000251openalex-snapshot
A 3D-printed hand-powered centrifuge for molecular biology
inferred← citeshttps://doi.org/10.1371/journal.pcbi.1006967openalex-snapshot
Recentrifuge: Robust comparative analysis and contamination removal for metagenomics
inferred← citeshttps://doi.org/10.1371/journal.pone.0235348openalex-snapshot
Microbiome diversity in Diaphorina citri populations from Kenya and Tanzania shows links to China
inferred← citeshttps://doi.org/10.22215/etd/2020-14126openalex-snapshot
The Robotic Molecular Biologist -Automated Processing of Astrobiological Samples for Planetary Missions
inferred← citeshttps://doi.org/10.3389/fcimb.2025.1701570openalex-snapshot
Nanopore sequencing in veterinary medicine: from concepts to clinical applications
inferred← citeshttps://doi.org/10.3389/fevo.2020.00100openalex-snapshot
DNA Barcoding of Nematodes Using the MinION
inferred← citeshttps://doi.org/10.3389/fgene.2020.00285openalex-snapshot
First Identification of Human Adenovirus Subtype 21a in China With MinION and Illumina Sequencers
inferred← citeshttps://doi.org/10.3389/fmicb.2017.02594openalex-snapshot
In Situ Field Sequencing and Life Detection in Remote (79°26′N) Canadian High Arctic Permafrost Ice Wedge Microbial Communities
inferred← citeshttps://doi.org/10.3389/fmicb.2021.768240openalex-snapshot
A Round Trip to the Desert: In situ Nanopore Sequencing Informs Targeted Bioprospecting
inferred← citeshttps://doi.org/10.3390/agriculture14070987openalex-snapshot
Novel Molecular Techniques for Identifying Agricultural Microorganisms
inferred← citeshttps://doi.org/10.3390/genes10060468openalex-snapshot
A Rapid and Accurate MinION-Based Workflow for Tracking Species Biodiversity in the Field
inferred← citeshttps://doi.org/10.3390/genes10110858openalex-snapshot
Genetic Biomonitoring and Biodiversity Assessment Using Portable Sequencing Technologies: Current Uses and Future Directions
inferred← citeshttps://doi.org/10.3390/genes10110902openalex-snapshot
Entirely Off-Grid and Solar-Powered DNA Sequencing of Microbial Communities during an Ice Cap Traverse Expedition
inferred← citeshttps://doi.org/10.3390/genes11010076openalex-snapshot
Off Earth Identification of Bacterial Populations Using 16S rDNA Nanopore Sequencing
inferred← citeshttps://doi.org/10.3390/pathogens10091183openalex-snapshot
Nanopore-Based Surveillance of Zoonotic Bacterial Pathogens in Farm-Dwelling Peridomestic Rodents
inferred← citeshttps://doi.org/10.3390/v16050798openalex-snapshot
The Applications of Nanopore Sequencing Technology in Animal and Human Virus Research
inferred← citeshttps://doi.org/10.5194/bg-22-6275-2025openalex-snapshot
On-site microbiome study of silica structures in a subterranean Mars analog environment
Editorial review for independent work. ICSAC — the Institute for Complexity
Science and Advanced Computing — runs a structured editorial panel for researchers
publishing outside journals, and publishes on CiteStamp rails. Submission is free
and goes through ORCID: icsacinstitute.org/submit.