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The rate of false polymorphisms introduced when imputing genotypes from global imputation panels

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What this work says

Outgoing claims: the papers this work cites, builds on, or argues with.

inferredcites →https://doi.org/10.1016/j.ajhg.2008.11.005openalex-snapshot
The Genome-wide Patterns of Variation Expose Significant Substructure in a Founder Population
inferredcites →https://doi.org/10.1016/j.ajhg.2009.01.013openalex-snapshot
Genotype-Imputation Accuracy across Worldwide Human Populations
inferredcites →https://doi.org/10.1038/nature11632openalex-snapshot
An integrated map of genetic variation from 1,092 human genomes
inferredcites →https://doi.org/10.1038/nature19057openalex-snapshot
Analysis of protein-coding genetic variation in 60,706 humans
inferredcites →https://doi.org/10.1038/nchembio.1414openalex-snapshot
Seeing is believing
inferredcites →https://doi.org/10.1038/ncomms9111openalex-snapshot
Improved imputation of low-frequency and rare variants using the UK10K haplotype reference panel
inferredcites →https://doi.org/10.1038/ng.3021openalex-snapshot
Whole-genome sequence variation, population structure and demographic history of the Dutch population
inferredcites →https://doi.org/10.1038/ng.3247openalex-snapshot
Large-scale whole-genome sequencing of the Icelandic population
inferredcites →https://doi.org/10.1038/ng.3643openalex-snapshot
A reference panel of 64,976 haplotypes for genotype imputation
inferredcites →https://doi.org/10.1038/nmeth.2307openalex-snapshot
Improved whole-chromosome phasing for disease and population genetic studies
inferredcites →https://doi.org/10.1093/bioinformatics/bts479openalex-snapshot
zCall: a rare variant caller for array-based genotyping
inferredcites →https://doi.org/10.1093/ije/dyp330openalex-snapshot
Thirty-five-year trends in cardiovascular risk factors in Finland
inferredcites →https://doi.org/10.1101/gr.106534.110openalex-snapshot
Founder population-specific HapMap panel increases power in GWA studies through improved imputation accuracy and CNV tagging
inferredcites →https://doi.org/10.1101/gr.173201openalex-snapshot
Linkage Disequilibrium Between Microsatellite Markers Extends Beyond 1 cM on Chromosome 20 in Finns
inferredcites →https://doi.org/10.1371/journal.pgen.1000529openalex-snapshot
A Flexible and Accurate Genotype Imputation Method for the Next Generation of Genome-Wide Association Studies
inferredcites →https://doi.org/10.1371/journal.pgen.1004494openalex-snapshot
Distribution and Medical Impact of Loss-of-Function Variants in the Finnish Founder Population

What points at this work

Incoming claims: where this work appears in other papers’ reference lists and arguments.

inferred← citeshttps://doi.org/10.1002/da.23066openalex-snapshot
Polygenic prediction of the risk of perinatal depressive symptoms
inferred← citeshttps://doi.org/10.1016/j.neuron.2018.04.014openalex-snapshot
Common Variant Burden Contributes to the Familial Aggregation of Migraine in 1,589 Families
inferred← citeshttps://doi.org/10.1017/s1751731118002860openalex-snapshot
Comparison of genotype imputation strategies using a combined reference panel for chicken population
inferred← citeshttps://doi.org/10.1038/ejhg.2017.51openalex-snapshot
Improved imputation accuracy of rare and low-frequency variants using population-specific high-coverage WGS-based imputation reference panel
inferred← citeshttps://doi.org/10.1038/s41398-023-02637-6openalex-snapshot
Nightmares share genetic risk factors with sleep and psychiatric traits
inferred← citeshttps://doi.org/10.1038/s41586-019-1457-zopenalex-snapshot
Exome sequencing of Finnish isolates enhances rare-variant association power
inferred← citeshttps://doi.org/10.1093/hmg/ddac050openalex-snapshot
Multi-ancestry genome-wide association study of gestational diabetes mellitus highlights genetic links with type 2 diabetes
inferred← citeshttps://doi.org/10.1101/464255openalex-snapshot
Exome sequencing identifies high-impact trait-associated alleles enriched in Finns
inferred← citeshttps://doi.org/10.1111/adb.12618openalex-snapshot
Genome‐wide association study in Finnish twins highlights the connection between nicotine addiction and neurotrophin signaling pathway
inferred← citeshttps://doi.org/10.1186/s12859-021-04337-8openalex-snapshot
A globally diverse reference alignment and panel for imputation of mitochondrial DNA variants
inferred← citeshttps://doi.org/10.21037/tcr-20-2395openalex-snapshot
Overcoming the challenges of imputation of rare variants in a Taiwanese cohort
inferred← citeshttps://doi.org/10.3389/fgene.2019.00239openalex-snapshot
Rare Variants Imputation in Admixed Populations: Comparison Across Reference Panels and Bioinformatics Tools
inferred← citeshttps://doi.org/10.3390/jcm8081236openalex-snapshot
APOE Promoter Polymorphism-219T/G is an Effect Modifier of the Influence of APOE ε4 on Alzheimer’s Disease Risk in a Multiracial Sample
inferred← citeshttps://doi.org/10.3410/f.736300835.793563460openalex-snapshot
Faculty Opinions recommendation of Exome sequencing of Finnish isolates enhances rare-variant association power.
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