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Hardy Weinberg Exact Test In Large Scale Variant Calling Quality Control
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What this work says
Outgoing claims: the papers this work cites, builds on, or argues with.
inferredcites →https://doi.org/10.1002/0471250953.bi1110s43openalex-snapshot
From FastQ Data to High‐Confidence Variant Calls: The Genome Analysis Toolkit Best Practices Pipeline
inferredcites →https://doi.org/10.1007/bf02981502openalex-snapshot
An exact test for randomness of mating
inferredcites →https://doi.org/10.1016/j.ajhg.2013.11.005openalex-snapshot
Whole-Exome Sequencing of 2,000 Danish Individuals and the Role of Rare Coding Variants in Type 2 Diabetes
inferredcites →https://doi.org/10.1016/j.cell.2011.09.008openalex-snapshot
Clan Genomics and the Complex Architecture of Human Disease
inferredcites →https://doi.org/10.1038/nature09534openalex-snapshot
A map of human genome variation from population-scale sequencing
inferredcites →https://doi.org/10.1038/nature15393openalex-snapshot
A global reference for human genetic variation
inferredcites →https://doi.org/10.1038/nature19057openalex-snapshot
Analysis of protein-coding genetic variation in 60,706 humans
inferredcites →https://doi.org/10.1038/nrg2986openalex-snapshot
Genotype and SNP calling from next-generation sequencing data
inferredcites →https://doi.org/10.1086/429864openalex-snapshot
A Note on Exact Tests of Hardy-Weinberg Equilibrium
inferredcites →https://doi.org/10.1093/bioinformatics/btp324openalex-snapshot
Fast and accurate short read alignment with Burrows–Wheeler transform
inferredcites →https://doi.org/10.1093/bioinformatics/btp698openalex-snapshot
Fast and accurate long-read alignment with Burrows–Wheeler transform
inferredcites →https://doi.org/10.1101/gr.107524.110openalex-snapshot
The Genome Analysis Toolkit: A MapReduce framework for analyzing next-generation DNA sequencing data
inferredcites →https://doi.org/10.1101/gr.146084.112openalex-snapshot
An integrative variant analysis pipeline for accurate genotype/haplotype inference in population NGS data
inferredcites →https://doi.org/10.1101/gr.157388.113openalex-snapshot
Estimating inbreeding coefficients from NGS data: Impact on genotype calling and allele frequency estimation
inferredcites →https://doi.org/10.1101/gr.176552.114openalex-snapshot
An efficient and scalable analysis framework for variant extraction and refinement from population-scale DNA sequence data
inferredcites →https://doi.org/10.1111/j.1469-1809.2006.00267.xopenalex-snapshot
The Merits of Testing Hardy‐Weinberg Equilibrium in the Analysis of Unmatched Case‐Control Data: A Cautionary Note
inferredcites →https://doi.org/10.1161/circgenetics.108.829747openalex-snapshot
Cohorts for Heart and Aging Research in Genomic Epidemiology (CHARGE) Consortium
inferredcites →https://doi.org/10.1186/1471-2105-12-1openalex-snapshot
MTML-msBayes: Approximate Bayesian comparative phylogeographic inference from multiple taxa and multiple loci with rate heterogeneity
inferredcites →https://doi.org/10.1186/1471-2105-12-231openalex-snapshot
Estimation of allele frequency and association mapping using next-generation sequencing data
inferredcites →https://doi.org/10.1186/1471-2105-15-1openalex-snapshot
New mini- zincin structures provide a minimal scaffold for members of this metallopeptidase superfamily
inferredcites →https://doi.org/10.1186/1471-2105-15-30openalex-snapshot
Launching genomics into the cloud: deployment of Mercury, a next generation sequence analysis pipeline
inferredcites →https://doi.org/10.1186/s12859-015-0844-1openalex-snapshot
Weakly supervised learning of biomedical information extraction from curated data
inferredcites →https://doi.org/10.1186/s12859-016-1211-6openalex-snapshot
A hybrid computational strategy to address WGS variant analysis in >5000 samples
inferredcites →https://doi.org/10.1214/aoms/1177730093openalex-snapshot
On a Matching Problem Arising in Genetics
inferredcites →https://doi.org/10.1515/sagmb-2012-0039openalex-snapshot
The mid p-value in exact tests for Hardy-Weinberg equilibrium
inferredcites →https://doi.org/10.1534/genetics.108.088005openalex-snapshot
Distributions of Hardy–Weinberg Equilibrium Test Statistics
What points at this work
Incoming claims: where this work appears in other papers’ reference lists and arguments.
inferred← citeshttps://doi.org/10.1038/s41598-019-52614-7openalex-snapshot
Empirical design of a variant quality control pipeline for whole genome sequencing data using replicate discordance
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