On the public citation graph

The Nucleosome Remodelling and Deacetylation complex restricts Mediator access to enhancers to control transcription

https://doi.org/10.1101/103192
0 signed · 64 inferred · view as graph

Inferred edges come from two machine sources: sweeps of open repository metadata (mostly SSRN and Zenodo), and a bulk OpenAlex citation snapshot. Every row below is labelled with the one it came from. Neither is a complete citation index — absence here is not evidence of absence.

Is this your work? Sign in with ORCID and put your name on the claims that are yours.
Claim with ORCID
Reference health. See whether every reference in this work resolves to a known work and none has been retracted — and get a dated CiteStamped badge you can embed.
See reference health

What this work says

Outgoing claims: the papers this work cites, builds on, or argues with.

inferredcites →https://doi.org/10.1016/0092-8674(94)90221-6openalex-snapshot
A multiprotein mediator of transcriptional activation and its interaction with the C-terminal repeat domain of RNA polymerase II
inferredcites →https://doi.org/10.1016/j.cell.2013.07.011openalex-snapshot
Mechanisms and Functions of ATP-Dependent Chromatin-Remodeling Enzymes
inferredcites →https://doi.org/10.1016/j.cell.2013.07.032openalex-snapshot
Mechanistic Interpretation of Promoter-Proximal Peaks and RNAPII Density Maps
inferredcites →https://doi.org/10.1016/j.cell.2016.08.050openalex-snapshot
Structure of a Complete Mediator-RNA Polymerase II Pre-Initiation Complex
inferredcites →https://doi.org/10.1016/j.celrep.2015.08.071openalex-snapshot
Regulation of Nucleosome Architecture and Factor Binding Revealed by Nuclease Footprinting of the ESC Genome
inferredcites →https://doi.org/10.1016/j.celrep.2016.09.066openalex-snapshot
A Simple Grammar Defines Activating and Repressing cis-Regulatory Elements in Photoreceptors
inferredcites →https://doi.org/10.1016/j.cels.2015.08.001openalex-snapshot
Transcription Factor Competition Allows Embryonic Stem Cells to Distinguish Authentic Signals from Noise
inferredcites →https://doi.org/10.1016/j.immuni.2004.05.005openalex-snapshot
The Chromatin Remodeler Mi-2β Is Required for CD4 Expression and T Cell Development
inferredcites →https://doi.org/10.1016/j.jmb.2016.01.028openalex-snapshot
Mediator Architecture and RNA Polymerase II Interaction
inferredcites →https://doi.org/10.1016/j.jmb.2016.04.025openalex-snapshot
The Nucleosome Remodeling and Deacetylase Complex NuRD Is Built from Preformed Catalytically Active Sub-modules
inferredcites →https://doi.org/10.1016/j.molcel.2009.10.019openalex-snapshot
Progression through the RNA Polymerase II CTD Cycle
inferredcites →https://doi.org/10.1016/j.molcel.2013.01.038openalex-snapshot
Modification of Enhancer Chromatin: What, How, and Why?
inferredcites →https://doi.org/10.1016/j.molcel.2013.10.001openalex-snapshot
Stable Pausing by RNA Polymerase II Provides an Opportunity to Target and Integrate Regulatory Signals
inferredcites →https://doi.org/10.1016/j.molcel.2014.06.005openalex-snapshot
Gene Silencing Triggers Polycomb Repressive Complex 2 Recruitment to CpG Islands Genome Wide
inferredcites →https://doi.org/10.1016/j.molcel.2014.12.008openalex-snapshot
Global and Specific Responses of the Histone Acetylome to Systematic Perturbation
inferredcites →https://doi.org/10.1016/j.semcdb.2016.05.014openalex-snapshot
Decoding transcriptional enhancers: Evolving from annotation to functional interpretation
inferredcites →https://doi.org/10.1016/j.stem.2012.02.020openalex-snapshot
NuRD Suppresses Pluripotency Gene Expression to Promote Transcriptional Heterogeneity and Lineage Commitment
inferredcites →https://doi.org/10.1016/j.stem.2014.02.013openalex-snapshot
INO80 Facilitates Pluripotency Gene Activation in Embryonic Stem Cell Self-Renewal, Reprogramming, and Blastocyst Development
inferredcites →https://doi.org/10.1016/j.stem.2014.05.006openalex-snapshot
Chromatin Repressive Complexes in Stem Cells, Development, and Cancer
inferredcites →https://doi.org/10.1016/j.tibs.2005.03.011openalex-snapshot
Mediator and the mechanism of transcriptional activation
inferredcites →https://doi.org/10.1016/j.tig.2011.06.006openalex-snapshot
Histone modification: cause or cog?
inferredcites →https://doi.org/10.1016/j.tig.2015.10.004openalex-snapshot
The Hierarchy of Transcriptional Activation: From Enhancer to Promoter
inferredcites →https://doi.org/10.1016/s0092-8674(00)81531-7openalex-snapshot
Sin Meets NuRD and Other Tails of Repression
inferredcites →https://doi.org/10.1016/s0092-8674(00)81758-4openalex-snapshot
The Dermatomyositis-Specific Autoantigen Mi2 Is a Component of a Complex Containing Histone Deacetylase and Nucleosome Remodeling Activities
inferredcites →https://doi.org/10.1016/s0168-9525(00)02066-7openalex-snapshot
NuRD and SIN3
inferredcites →https://doi.org/10.1016/s0960-9822(98)70328-8openalex-snapshot
A multiple subunit Mi-2 histone deacetylase from Xenopus laevis cofractionates with an associated Snf2 superfamily ATPase
inferredcites →https://doi.org/10.1016/s1097-2765(00)80299-3openalex-snapshot
NURD, a Novel Complex with Both ATP-Dependent Chromatin-Remodeling and Histone Deacetylase Activities
inferredcites →https://doi.org/10.1038/27699openalex-snapshot
Chromatin deacetylation by an ATP-dependent nucleosome remodelling complex
inferredcites →https://doi.org/10.1038/387016a0openalex-snapshot
Sinful repression
inferredcites →https://doi.org/10.1038/47412openalex-snapshot
The language of covalent histone modifications
inferredcites →https://doi.org/10.1038/cr.2011.32openalex-snapshot
ATP-dependent chromatin remodeling: genetics, genomics and mechanisms
inferredcites →https://doi.org/10.1038/emboj.2009.336openalex-snapshot
NuRD mediates activating and repressive functions of GATA‐1 and FOG‐1 during blood development
inferredcites →https://doi.org/10.1038/emboj.2011.431openalex-snapshot
NuRD‐mediated deacetylation of H3K27 facilitates recruitment of Polycomb Repressive Complex 2 to direct gene repression
inferredcites →https://doi.org/10.1038/nature10805openalex-snapshot
Enhancer decommissioning by LSD1 during embryonic stem cell differentiation
inferredcites →https://doi.org/10.1038/nature16505openalex-snapshot
Genome-wide nucleosome specificity and function of chromatin remodellers in ES cells
inferredcites →https://doi.org/10.1038/ng.3381openalex-snapshot
Absence of canonical marks of active chromatin in developmentally regulated genes
inferredcites →https://doi.org/10.1038/ni.2150openalex-snapshot
Harnessing of the nucleosome-remodeling-deacetylase complex controls lymphocyte development and prevents leukemogenesis
inferredcites →https://doi.org/10.1038/ni.2828openalex-snapshot
Stage-specific control of early B cell development by the transcription factor Ikaros
inferredcites →https://doi.org/10.1038/nrg3207openalex-snapshot
Transcription factors: from enhancer binding to developmental control
inferredcites →https://doi.org/10.1038/nrg3293openalex-snapshot
Promoter-proximal pausing of RNA polymerase II: emerging roles in metazoans
inferredcites →https://doi.org/10.1038/nrg3607openalex-snapshot
Chromatin modifiers and remodellers: regulators of cellular differentiation
inferredcites →https://doi.org/10.1038/nrm3951openalex-snapshot
The Mediator complex: a central integrator of transcription
inferredcites →https://doi.org/10.1038/nsmb.2718openalex-snapshot
Overlapping chromatin-remodeling systems collaborate genome wide at dynamic chromatin transitions
inferredcites →https://doi.org/10.1042/bst20130027openalex-snapshot
CHD4 in the DNA-damage response and cell cycle progression: not so NuRDy now
inferredcites →https://doi.org/10.1073/pnas.1605085113openalex-snapshot
Syntax compensates for poor binding sites to encode tissue specificity of developmental enhancers
inferredcites →https://doi.org/10.1093/nar/gkt035openalex-snapshot
Differential roles for MBD2 and MBD3 at methylated CpG islands, active promoters and binding to exon sequences
inferredcites →https://doi.org/10.1093/nar/gku895openalex-snapshot
CODEX: a next-generation sequencing experiment database for the haematopoietic and embryonic stem cell communities
inferredcites →https://doi.org/10.1101/gad.1643208openalex-snapshot
NELF-mediated stalling of Pol II can enhance gene expression by blocking promoter-proximal nucleosome assembly
inferredcites →https://doi.org/10.1111/febs.12972openalex-snapshot
Towards elucidating the stability, dynamics and architecture of the nucleosome remodeling and deacetylase complex by using quantitative interaction proteomics
inferredcites →https://doi.org/10.1111/febs.13132openalex-snapshot
The function of chromatin modifiers in lineage commitment and cell fate specification
inferredcites →https://doi.org/10.1128/mcb.00467-08openalex-snapshot
MBD3, a Component of the NuRD Complex, Facilitates Chromatin Alteration and Deposition of Epigenetic Marks
inferredcites →https://doi.org/10.1128/mcb.00553-14openalex-snapshot
Functional Interactions between NURF and Ctcf Regulate Gene Expression
inferredcites →https://doi.org/10.1128/mcb.06365-11openalex-snapshot
Remodelers Organize Cellular Chromatin by Counteracting Intrinsic Histone-DNA Sequence Preferences in a Class-Specific Manner
inferredcites →https://doi.org/10.1128/mcb.18.11.6538openalex-snapshot
Identification and Characterization of a Family of Mammalian Methyl-CpG Binding Proteins
inferredcites →https://doi.org/10.1146/annurev.biochem.77.062706.153223openalex-snapshot
The Biology of Chromatin Remodeling Complexes
inferredcites →https://doi.org/10.1242/dev.083105openalex-snapshot
Transcriptional repressors: multifaceted regulators of gene expression
inferredcites →https://doi.org/10.1242/dev.125450openalex-snapshot
Constraint of gene expression by chromatin remodelling protein CHD4 facilitates lineage specification
inferredcites →https://doi.org/10.1242/dev.139113openalex-snapshot
Sall4 controls differentiation of pluripotent cells independently of the Nucleosome Remodelling and Deacetylation (NuRD) complex
inferredcites →https://doi.org/10.1371/journal.pgen.1004028openalex-snapshot
MBD3 Localizes at Promoters, Gene Bodies and Enhancers of Active Genes
inferredcites →https://doi.org/10.1371/journal.pgen.1004202openalex-snapshot
Uncoupling Transcription from Covalent Histone Modification
inferredcites →https://doi.org/10.1371/journal.pgen.1005940openalex-snapshot
The Chromatin Remodelling Enzymes SNF2H and SNF2L Position Nucleosomes adjacent to CTCF and Other Transcription Factors
inferredcites →https://doi.org/10.1371/journal.pgen.1005969openalex-snapshot
Genome-Wide Mapping Targets of the Metazoan Chromatin Remodeling Factor NURF Reveals Nucleosome Remodeling at Enhancers, Core Promoters and Gene Insulators
inferredcites →https://doi.org/10.1371/journal.pone.0107765openalex-snapshot
A Functional Insulator Screen Identifies NURF and dREAM Components to Be Required for Enhancer-Blocking

What points at this work

Incoming claims: where this work appears in other papers’ reference lists and arguments.

inferred← citeshttps://doi.org/10.1038/s41467-018-04503-2openalex-snapshot
Tumour-associated missense mutations in the dMi-2 ATPase alters nucleosome remodelling properties in a mutation-specific manner
Editorial review for independent work. ICSAC — the Institute for Complexity Science and Advanced Computing — runs a structured editorial panel for researchers publishing outside journals, and publishes on CiteStamp rails. Submission is free and goes through ORCID: icsacinstitute.org/submit.