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Phylogenetic analyses reveal an increase in the speciation rate of raphid pennate diatoms in the Cretaceous

https://doi.org/10.1101/104612
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What this work says

Outgoing claims: the papers this work cites, builds on, or argues with.

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Generalised Linear Models
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The Geological Succession of Primary Producers in the Oceans
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Estimating diversification rates from phylogenetic information
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Diversity dynamics of marine planktonic diatoms across the Cenozoic
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The life of diatoms in the world's oceans
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Complex archaea that bridge the gap between prokaryotes and eukaryotes
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Selective silicate-directed motility in diatoms
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Rates of speciation and morphological evolution are correlated across the largest vertebrate radiation
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Effect of nutrient availability on marine origination rates throughout the Phanerozoic eon
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Nine exceptional radiations plus high turnover explain species diversity in jawed vertebrates
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Limits to gene flow in a cosmopolitan marine planktonic diatom
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Mammalian phylogeny reveals recent diversification rate shifts
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Continental erosion and the Cenozoic rise of marine diatoms
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PLANKTONIC MARINE DIATOM RECORD OF THE PAST 18 M.Y.: APPEARANCES AND EXTINCTIONS IN THE PACIFIC AND SOUTHERN OCEANS
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Proposals for a terminology for diatom sexual reproduction, auxospores and resting stages
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A Simple, Fast, and Accurate Algorithm to Estimate Large Phylogenies by Maximum Likelihood
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The Diatom Sex Clock and Its Evolutionary Significance
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Strontium Isotope Stratigraphy: LOWESS Version 3: Best Fit to the Marine Sr‐Isotope Curve for 0–509 Ma and Accompanying Look‐up Table for Deriving Numerical Age
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MrBayes 3: Bayesian phylogenetic inference under mixed models
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AWTY (are we there yet?): a system for graphical exploration of MCMC convergence in Bayesian phylogenetics
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Approximate Bayes factors and accounting for model uncertainty in generalised linear models
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jModelTest: Phylogenetic Model Averaging
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MAFFT Multiple Sequence Alignment Software Version 7: Improvements in Performance and Usability
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MAFFT version 5: improvement in accuracy of multiple sequence alignment
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ALTER: program-oriented conversion of DNA and protein alignments
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Selection of Conserved Blocks from Multiple Alignments for Their Use in Phylogenetic Analysis
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Phylogenetic Analysis of Covariance by Computer Simulation
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New Algorithms and Methods to Estimate Maximum-Likelihood Phylogenies: Assessing the Performance of PhyML 3.0
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PASTIS : an R package to facilitate phylogenetic assembly with soft taxonomic inferences
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ECOLOGICAL CONSIDERATIONS OF DIATOM CELL MOTILITY. I. CHARACTERIZATION OF MOTILITY AND ADHESION IN FOUR DIATOM SPECIES1
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PHYLOGENETIC POSITION OF ATTHEYA LONGICORNIS AND ATTHEYA SEPTENTRIONALIS (BACILLARIOPHYTA)1
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LIGHT‐INDUCED MOTILE RESPONSES OF THE ESTUARINE BENTHIC DIATOMS NAVICULA PERMINUTA AND CYLINDROTHECA CLOSTERIUM (BACILLARIOPHYCEAE)1
inferredcites →https://doi.org/10.1111/j.2041-210x.2011.00169.xopenalex-snapshot
phytools: an R package for phylogenetic comparative biology (and other things)
inferredcites →https://doi.org/10.1111/tpj.12496openalex-snapshot
Pheromone signaling during sexual reproduction in algae
inferredcites →https://doi.org/10.1126/science.1070710openalex-snapshot
Global Dispersal of Free-Living Microbial Eukaryote Species
inferredcites →https://doi.org/10.1126/science.1095964openalex-snapshot
The Evolution of Modern Eukaryotic Phytoplankton
inferredcites →https://doi.org/10.1127/pip/2016/0050openalex-snapshot
The geological story of marine diatoms and the last generation of fossil fuels
inferredcites →https://doi.org/10.1146/annurev.ecolsys.35.112202.130137openalex-snapshot
Evolutionary Trajectories and Biogeochemical Impacts of Marine Eukaryotic Phytoplankton
inferredcites →https://doi.org/10.1146/annurev.ecolsys.38.091206.095815openalex-snapshot
The Great American Schism: Divergence of Marine Organisms After the Rise of the Central American Isthmus
inferredcites →https://doi.org/10.1166/jnn.2005.007openalex-snapshot
Comments on Recent Progress Toward Reconstructing the Diatom Phylogeny
inferredcites →https://doi.org/10.1186/1471-2148-11-1openalex-snapshot
Phylogenomic reconstruction of lactic acid bacteria: an update
inferredcites →https://doi.org/10.1186/1471-2148-11-311openalex-snapshot
A Bayesian framework to estimate diversification rates and their variation through time and space
inferredcites →https://doi.org/10.1186/1471-2148-7-214openalex-snapshot
BEAST: Bayesian evolutionary analysis by sampling trees
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Relaxed Phylogenetics and Dating with Confidence
inferredcites →https://doi.org/10.1371/journal.pone.0084857openalex-snapshot
Cenozoic Planktonic Marine Diatom Diversity and Correlation to Climate Change
inferredcites →https://doi.org/10.1371/journal.pone.0089543openalex-snapshot
Automatic Detection of Key Innovations, Rate Shifts, and Diversity-Dependence on Phylogenetic Trees
inferredcites →https://doi.org/10.2108/zsj.23.893openalex-snapshot
Phylogenetic Analysis of Hampala Fishes (Subfamily Cyprininae) in Malaysia Inferred from Partial Mitochondrial CytochromebDNA Sequences
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Evolution of the diatoms: insights from fossil, biological and molecular data
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The Diatoms. Biology and Morphology of the Genera.
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The Cenozoic deep sea microfossil record: Explorations of the DSDP/ODP sample set using the NEPTUNE database

What points at this work

Incoming claims: where this work appears in other papers’ reference lists and arguments.

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Probabilistic Diatom Adaptive Radiation in the Southern Ocean
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Intraspecific genetic diversity with unrestricted gene flow in the domoic acid-producing diatom Nitzschia navis-varingica (Bacillariophyceae) from the Western Pacific
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Attheya (Bacillariophyta) from the northwestern Sea of Japan: a description of two subgenera based on molecular and morphological data
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Comparative analysis of full-length mitochondrial genomes of five Skeletonema species reveals conserved genome organization and recent speciation
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