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Boron Hyperaccumulation Mechanisms in Puccinellia distans as Revealed by Transcriptomic Analysis

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What this work says

Outgoing claims: the papers this work cites, builds on, or argues with.

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The KEGG Database
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Using the KEGG Database Resource
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Rapid response reactions of roots to boron deprivation
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Plant Nutrient Acquisition
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Boron in Plant Nutrition and Cell Wall Development
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Plant Adaptation and Phytoremediation
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Comparison of techniques for determining the effect of aluminium on the growth of, and the inheritance of aluminium tolerance in wheat
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Physiological and genetic control of the tolerance of wheat to high concentrations of boron and implications for plant breeding
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Abundant embryonic mRNA in field bean (Vicia faba L.) codes for a new class of seed proteins: cDNA cloning and characterization of the primary translation product
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Characterisation of Al-stimulated efflux of malate from the apices of Al-tolerant wheat roots
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The plant hormone abscisic acid mediates the drought-induced expression but not the seed-specific expression of rd22, a gene responsive to dehydration stress in Arabidopsis thaliana
inferredcites →https://doi.org/10.1007/bf01678128openalex-snapshot
Phenotypic variation in boron-toxicity tolerance at seedling stage in durum wheat (Triticum durum)
inferredcites →https://doi.org/10.1007/bf02507164openalex-snapshot
Boron and calcium, essential inorganic constituents of pectic polysaccharides in higher plant cell walls
inferredcites →https://doi.org/10.1007/s00299-012-1256-6openalex-snapshot
A comparative transcriptomic analysis of the extremely boron tolerant plant Puccinellia distans with the moderately boron tolerant Gypsophila arrostil
inferredcites →https://doi.org/10.1007/s00424-007-0370-8openalex-snapshot
Physiological roles and transport mechanisms of boron: perspectives from plants
inferredcites →https://doi.org/10.1007/s00425-007-0520-4openalex-snapshot
Overexpression of a Panax ginseng tonoplast aquaporin alters salt tolerance, drought tolerance and cold acclimation ability in transgenic Arabidopsis plants
inferredcites →https://doi.org/10.1007/s10142-010-0207-yopenalex-snapshot
Differential expression and alternative splicing of rice sulphate transporter family members regulate sulphur status during plant growth, development and stress conditions
inferredcites →https://doi.org/10.1007/s11104-005-0372-2openalex-snapshot
Distribution and Partitioning of Newly Taken-up Boron in Sunflower
inferredcites →https://doi.org/10.1007/s11104-010-0614-9openalex-snapshot
Significant contribution of boron stored in seeds to initial growth of rice seedlings
inferredcites →https://doi.org/10.1007/s11270-007-9401-5openalex-snapshot
Phytoremediation Technology: Hyper-accumulation Metals in Plants
inferredcites →https://doi.org/10.1016/0955-0674(92)90111-oopenalex-snapshot
Synthesis, assembly and function of plant cell wall macromolecules
inferredcites →https://doi.org/10.1016/b978-0-12-384905-2.00021-2openalex-snapshot
Copyright
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Marschner's Mineral Nutrition of Higher Plants
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Modification of chromate toxicity by sulphate in duckweeds (Lemnaceae)
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The expression of several cell wall-related genes in Arabidopsis roots is down-regulated under boron deficiency
inferredcites →https://doi.org/10.1016/j.febslet.2008.03.045openalex-snapshot
Molybdate transport through the plant sulfate transporter SHST1
inferredcites →https://doi.org/10.1016/j.gexplo.2014.12.020openalex-snapshot
Boron accumulation in Puccinellia frigida, an extremely tolerant and promising species for boron phytoremediation
inferredcites →https://doi.org/10.1016/j.jhazmat.2016.05.086openalex-snapshot
Boron stress response and accumulation potential of the extremely tolerant species Puccinellia frigida
inferredcites →https://doi.org/10.1016/j.jprot.2015.04.007openalex-snapshot
An investigation of boron-toxicity in leaves of two citrus species differing in boron-tolerance using comparative proteomics
inferredcites →https://doi.org/10.1016/j.pbi.2007.04.014openalex-snapshot
Regulatory metabolic networks in drought stress responses
inferredcites →https://doi.org/10.1016/j.plantsci.2015.06.002openalex-snapshot
Metalloido-porins: Essentiality of Nodulin 26-like intrinsic proteins in metalloid transport
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Development of a cDNA microarray to identify gene expression of Puccinellia tenuiflora under saline–alkali stress
inferredcites →https://doi.org/10.1016/j.tplants.2008.05.007openalex-snapshot
Boron transport mechanisms: collaboration of channels and transporters
inferredcites →https://doi.org/10.1016/s0168-9452(00)00224-7openalex-snapshot
Salinity induced behavioural changes in malate dehydrogenase and glutamate dehydrogenase activities in rice seedlings of differing salt tolerance
inferredcites →https://doi.org/10.1016/s0168-9452(99)00150-8openalex-snapshot
myo-Inositol metabolism in plants
inferredcites →https://doi.org/10.1021/es1016334openalex-snapshot
Mechanisms of Boron Tolerance and Accumulation in Plants: A Physiological Comparison of the Extremely Boron-Tolerant Plant Species, Puccinellia distans , with the Moderately Boron-Tolerant Gypsophila arrostil
inferredcites →https://doi.org/10.1023/a:1004272227886openalex-snapshot
Boron toxicity
inferredcites →https://doi.org/10.1023/a:1005851801107openalex-snapshot
Bnm1, a Brassica pollen-specific gene
inferredcites →https://doi.org/10.1038/nmeth.1923openalex-snapshot
Fast gapped-read alignment with Bowtie 2
inferredcites →https://doi.org/10.1038/nprot.2012.016openalex-snapshot
Differential gene and transcript expression analysis of RNA-seq experiments with TopHat and Cufflinks
inferredcites →https://doi.org/10.1038/nprot.2013.084openalex-snapshot
De novo transcript sequence reconstruction from RNA-Seq: reference generation and analysis with Trinity
inferredcites →https://doi.org/10.1038/nrm1746openalex-snapshot
Growth of the plant cell wall
inferredcites →https://doi.org/10.1038/srep32717openalex-snapshot
Na2CO3-responsive mechanisms in halophyte Puccinellia tenuiflora roots revealed by physiological and proteomic analyses
inferredcites →https://doi.org/10.1042/bc20040133openalex-snapshot
Regulation of plant aquaporin activity
inferredcites →https://doi.org/10.1046/j.0016-8025.2001.00791.xopenalex-snapshot
Plant aquaporins: multifunctional water and solute channels with expanding roles
inferredcites →https://doi.org/10.1046/j.0960-7412.2001.01227.xopenalex-snapshot
Important roles of drought‐ and cold‐inducible genes for galactinol synthase in stress tolerance in Arabidopsis thaliana
inferredcites →https://doi.org/10.1071/pp99086openalex-snapshot
Characterization of root boron pools, boron uptake and boron translocation in sunflower using the stable isotopes 10 B and 11 B
inferredcites →https://doi.org/10.1080/00103620600817408openalex-snapshot
Application of Soil and Plant Analysis for Applied Research and Development in West Asia–North Africa: An International Center's Perspective
inferredcites →https://doi.org/10.1080/00380768.1994.10413300openalex-snapshot
Effects of boron on nodule development and symbiotic nitrogen fixation in soybean plants
inferredcites →https://doi.org/10.1080/00380768.2001.10408398openalex-snapshot
Preferential translocation of boron to young leaves inArabidopsis thalianaRegulated by theBOR1Gene
inferredcites →https://doi.org/10.1080/07352680590910410openalex-snapshot
Drought and Salt Tolerance in Plants
inferredcites →https://doi.org/10.1080/15592324.2016.1217375openalex-snapshot
Pollen aquaporins: What are they there for?
inferredcites →https://doi.org/10.1086/297087openalex-snapshot
Water Uptake by Growing Cells: An Assessment of the Controlling Roles of Wall Relaxation, Solute Uptake, and Hydraulic Conductance
inferredcites →https://doi.org/10.1093/bioinformatics/bti610openalex-snapshot
Blast2GO: a universal tool for annotation, visualization and analysis in functional genomics research
inferredcites →https://doi.org/10.1093/bioinformatics/btm404openalex-snapshot
Clustal W and Clustal X version 2.0
inferredcites →https://doi.org/10.1093/bioinformatics/btp536openalex-snapshot
QuickGO: a web-based tool for Gene Ontology searching
inferredcites →https://doi.org/10.1093/femsle/fnu001openalex-snapshot
The manganese-responsive regulator MntR represses transcription of a predicted ZIP family metal ion transporter in Corynebacterium glutamicum
inferredcites →https://doi.org/10.1093/jxb/erl164openalex-snapshot
Gene networks involved in drought stress response and tolerance
inferredcites →https://doi.org/10.1093/molbev/msn067openalex-snapshot
An Improved General Amino Acid Replacement Matrix
inferredcites →https://doi.org/10.1093/molbev/mst197openalex-snapshot
MEGA6: Molecular Evolutionary Genetics Analysis Version 6.0
inferredcites →https://doi.org/10.1093/nar/gkw1138openalex-snapshot
PANTHER version 11: expanded annotation data from Gene Ontology and Reactome pathways, and data analysis tool enhancements
inferredcites →https://doi.org/10.1093/oxfordjournals.jbchem.a123201openalex-snapshot
Purification and Properties of 4-Hydroxy-4-Methyl-2-Oxoglutarate Aldolase from Pseudomonas ochraceae Grown on Phthalate
inferredcites →https://doi.org/10.1093/pcp/pcm159openalex-snapshot
Identification of Boron Transporter Genes Likely to be Responsible for Tolerance to Boron Toxicity in Wheat and Barley
inferredcites →https://doi.org/10.1101/gad.1953910openalex-snapshot
Early abscisic acid signal transduction mechanisms: newly discovered components and newly emerging questions
inferredcites →https://doi.org/10.1104/pp.103.037028openalex-snapshot
Boron Tolerance in Barley Is Mediated by Efflux of Boron from the Roots
inferredcites →https://doi.org/10.1104/pp.124.3.1349openalex-snapshot
Permeability and Channel-Mediated Transport of Boric Acid across Membrane Vesicles Isolated from Squash Roots
inferredcites →https://doi.org/10.1105/tpc.007906openalex-snapshot
Arabidopsis OST1 Protein Kinase Mediates the Regulation of Stomatal Aperture by Abscisic Acid and Acts Upstream of Reactive Oxygen Species Production
inferredcites →https://doi.org/10.1105/tpc.009225openalex-snapshot
Overexpression of a Plasma Membrane Aquaporin in Transgenic Tobacco Improves Plant Vigor under Favorable Growth Conditions but Not under Drought or Salt Stress
inferredcites →https://doi.org/10.1105/tpc.010210openalex-snapshot
Abscisic Acid Activation of Plasma Membrane Ca2+ Channels in Guard Cells Requires Cytosolic NAD(P)H and Is Differentially Disrupted Upstream and Downstream of Reactive Oxygen Species Production in abi1-1 and abi2-1 Protein Phosphatase 2C Mutants
inferredcites →https://doi.org/10.1105/tpc.106.041640openalex-snapshot
The Arabidopsis Major Intrinsic Protein NIP5;1 Is Essential for Efficient Boron Uptake and Plant Development under Boron Limitation
inferredcites →https://doi.org/10.1105/tpc.11.9.1785openalex-snapshot
Arabidopsis abi1-1 and abi2-1 Phosphatase Mutations Reduce Abscisic Acid–Induced Cytoplasmic Calcium Rises in Guard Cells
inferredcites →https://doi.org/10.1105/tpc.4.9.1147openalex-snapshot
The beta subunit of tomato fruit polygalacturonase isoenzyme 1: isolation, characterization, and identification of unique structural features.
inferredcites →https://doi.org/10.1111/j.1365-3040.2012.02526.xopenalex-snapshot
Expression of an apoplast‐localized BURP‐domain protein from soybean (GmRD22) enhances tolerance towards abiotic stress
inferredcites →https://doi.org/10.1111/j.1365-313x.2003.01998.xopenalex-snapshot
dwarf and delayed‐flowering 1, a novel Arabidopsis mutant deficient in gibberellin biosynthesis because of overexpression of a putative AP2 transcription factor
inferredcites →https://doi.org/10.1111/j.1365-313x.2006.02763.xopenalex-snapshot
Improvement of seed yields under boron‐limiting conditions through overexpression of BOR1, a boron transporter for xylem loading, in Arabidopsis thaliana
inferredcites →https://doi.org/10.1111/tpj.12511openalex-snapshot
O s NIP 3;1, a rice boric acid channel, regulates boron distribution and is essential for growth under boron‐deficient conditions
inferredcites →https://doi.org/10.1126/science.1146634openalex-snapshot
Plants Tolerant of High Boron Levels
inferredcites →https://doi.org/10.1146/annurev-arplant-042809-112122openalex-snapshot
Abscisic Acid: Emergence of a Core Signaling Network
inferredcites →https://doi.org/10.1146/annurev.arplant.59.032607.092804openalex-snapshot
Gibberellin Metabolism and its Regulation
inferredcites →https://doi.org/10.1146/annurev.cellbio.20.082503.103053openalex-snapshot
ANISOTROPIC EXPANSION OF THE PLANT CELL WALL
inferredcites →https://doi.org/10.1186/1471-2229-10-1openalex-snapshot
Identification of genes differentially expressed during interaction of resistant and susceptible apple cultivars (Malus × domestica) with Erwinia amylovora
inferredcites →https://doi.org/10.1186/gb-2001-3-1-research0001openalex-snapshot
From genome to function: the Arabidopsis aquaporins
inferredcites →https://doi.org/10.1242/jeb.089938openalex-snapshot
The role of gibberellin signalling in plant responses to abiotic stress
inferredcites →https://doi.org/10.14806/ej.17.1.200openalex-snapshot
Cutadapt removes adapter sequences from high-throughput sequencing reads
inferredcites →https://doi.org/10.2134/agronj1988.00021962008000050013xopenalex-snapshot
Functional Boron Requirement for Leaf Expansion and Its Use as a Critical Value for Diagnosis of Boron Deficiency in Soybean
inferredcites →https://doi.org/10.3389/fpls.2011.00063openalex-snapshot
Experimental flux measurements on a network scale
inferredcites →https://doi.org/10.3389/fpls.2011.00119openalex-snapshot
Evolutionary Relationships and Functional Diversity of Plant Sulfate Transporters
inferredcites →https://doi.org/10.3389/fpls.2015.00412openalex-snapshot
AtPGL3 is an Arabidopsis BURP domain protein that is localized to the cell wall and promotes cell enlargement
inferredcites →https://doi.org/10.3390/ijms16010496openalex-snapshot
Transcriptional Responses of a Bicarbonate-Tolerant Monocot, Puccinellia tenuiflora, and a Related Bicarbonate-Sensitive Species, Poa annua, to NaHCO3 Stress
inferredcites →https://doi.org/10.3390/jdb4010009openalex-snapshot
The Roles of Aquaporins in Plant Stress Responses

What points at this work

Incoming claims: where this work appears in other papers’ reference lists and arguments.

inferred← citeshttps://doi.org/10.1007/s11033-018-4154-3openalex-snapshot
Genome-wide identification of barley MCs (metacaspases) and their possible roles in boron-induced programmed cell death
inferred← citeshttps://doi.org/10.1016/j.jplph.2017.06.013openalex-snapshot
Proteomic analysis of naturally occurring boron tolerant plant Gypsophila sphaerocephala L. in response to high boron concentration
inferred← citeshttps://doi.org/10.24925/turjaf.v5i8.858-863.1114openalex-snapshot
The Evaluation of Alkali Grass (Puccinellia ciliata Bor) Populations in Aydin Province of Turkey
inferred← citeshttps://doi.org/10.3390/agronomy13030631openalex-snapshot
Insight into the Boron Toxicity Stress-Responsive Genes in Boron-Tolerant Triticum dicoccum Shoots Using RNA Sequencing
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