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The interplay of demography and selection during maize domestication and expansion

https://doi.org/10.1101/114579
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Outgoing claims: the papers this work cites, builds on, or argues with.

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Vegetation in western Central Mexico during the last 50 000 years: modern analogs and climate in the Zacapu Basin
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Late Pleistocene and Holocene environmental history of the Iguala Valley, Central Balsas Watershed of Mexico
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Directly dated starch residues document early formative maize ( Zea mays L.) in tropical Ecuador
inferredcites →https://doi.org/10.1073/pnas.0812525106openalex-snapshot
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inferredcites →https://doi.org/10.1073/pnas.0914274108openalex-snapshot
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inferredcites →https://doi.org/10.1073/pnas.1120270109openalex-snapshot
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inferredcites →https://doi.org/10.1073/pnas.1413864112openalex-snapshot
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ngsTools: methods for population genetics analyses from next-generation sequencing data
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inferredcites →https://doi.org/10.1093/molbev/msu269openalex-snapshot
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inferredcites →https://doi.org/10.1093/molbev/msw102openalex-snapshot
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inferredcites →https://doi.org/10.1093/molbev/msw169openalex-snapshot
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inferredcites →https://doi.org/10.1093/molbev/msw296openalex-snapshot
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inferredcites →https://doi.org/10.1101/013540openalex-snapshot
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inferredcites →https://doi.org/10.1101/gr.157388.113openalex-snapshot
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inferredcites →https://doi.org/10.1101/gr.3577405openalex-snapshot
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inferredcites →https://doi.org/10.1111/mec.12524openalex-snapshot
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inferredcites →https://doi.org/10.1126/science.1107891openalex-snapshot
The Effects of Artificial Selection on the Maize Genome
inferredcites →https://doi.org/10.1126/science.1153717openalex-snapshot
Worldwide Human Relationships Inferred from Genome-Wide Patterns of Variation
inferredcites →https://doi.org/10.1126/science.1174276openalex-snapshot
The Genetic Architecture of Maize Flowering Time
inferredcites →https://doi.org/10.1126/science.1178534openalex-snapshot
The B73 Maize Genome: Complexity, Diversity, and Dynamics
inferredcites →https://doi.org/10.1126/science.1188021openalex-snapshot
A Draft Sequence of the Neandertal Genome
inferredcites →https://doi.org/10.1186/1471-2105-14-289openalex-snapshot
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inferredcites →https://doi.org/10.1186/1471-2156-13-27openalex-snapshot
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inferredcites →https://doi.org/10.1186/s12859-014-0356-4openalex-snapshot
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inferredcites →https://doi.org/10.1186/s13059-014-0572-2openalex-snapshot
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inferredcites →https://doi.org/10.1186/s13059-015-0712-3openalex-snapshot
Barley landraces are characterized by geographically heterogeneous genomic origins
inferredcites →https://doi.org/10.1371/journal.pcbi.1001025openalex-snapshot
Identifying a High Fraction of the Human Genome to be under Selective Constraint Using GERP++
inferredcites →https://doi.org/10.1371/journal.pgen.1002655openalex-snapshot
Evidence of Inbreeding Depression on Human Height
inferredcites →https://doi.org/10.1371/journal.pgen.1003477openalex-snapshot
The Genomic Signature of Crop-Wild Introgression in Maize
inferredcites →https://doi.org/10.1371/journal.pgen.1005854openalex-snapshot
The Epigenomic Landscape of Prokaryotes
inferredcites →https://doi.org/10.1371/journal.pgen.1006340openalex-snapshot
The Strength of Selection against Neanderthal Introgression
inferredcites →https://doi.org/10.1371/journal.pgen.1007019openalex-snapshot
Incomplete dominance of deleterious alleles contributes substantially to trait variation and heterosis in maize
inferredcites →https://doi.org/10.1371/journal.pone.0012060openalex-snapshot
A Geospatial Modelling Approach Integrating Archaeobotany and Genetics to Trace the Origin and Dispersal of Domesticated Plants
inferredcites →https://doi.org/10.1534/g3.113.008870openalex-snapshot
The Pattern and Distribution of Deleterious Mutations in Maize
inferredcites →https://doi.org/10.1534/genetics.108.097238openalex-snapshot
Historical Divergence and Gene Flow in the Genus Zea
inferredcites →https://doi.org/10.1534/genetics.110.124560openalex-snapshot
Inferences About the Distribution of Dominance Drawn From Yeast Gene Knockout Data
inferredcites →https://doi.org/10.1534/genetics.111.132944openalex-snapshot
Fitness Landscapes: An Alternative Theory for the Dominance of Mutation
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Serial Founder Effects During Range Expansion: A Spatial Analog of Genetic Drift
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inferredcites →https://doi.org/10.1534/genetics.113.154740openalex-snapshot
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inferredcites →https://doi.org/10.1534/genetics.115.178327openalex-snapshot
Independent Molecular Basis of Convergent Highland Adaptation in Maize
inferredcites →https://doi.org/10.1534/genetics.115.182410openalex-snapshot
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Effects of Linked Selective Sweeps on Demographic Inference and Model Selection
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Phytochemical Ecology, Phytochemical Society Symposia Series no. 8
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Population structure and genetic diversity of New World maize races assessed by DNA microsatellites

What points at this work

Incoming claims: where this work appears in other papers’ reference lists and arguments.

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Genome‐wide association study of multiple yield traits in a diversity panel of polyploid sugarcane ( Saccharum spp.)
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The population genetics of structural variants in grapevine domestication
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Triticum population sequencing provides insights into wheat adaptation
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Genome-wide selection and genetic improvement during modern maize breeding
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Plant Genome Editing and the Relevance of Off-Target Changes
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The interplay of demography and selection during maize domestication and expansion
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Diamonds in the not-so-rough: Wild relative diversity hidden in crop genomes
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Incomplete dominance of deleterious alleles contributes substantially to trait variation and heterosis in maize
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Evolutionary insights into plant breeding
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Adaptive Introgression: An Untapped Evolutionary Mechanism for Crop Adaptation
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Peer Review #1 of "Characterization of introgression from the teosinte Zea mays ssp. mexicana to Mexican highland maize (v0.1)"
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Peer Review #2 of "Characterization of introgression from the teosinte Zea mays ssp. mexicana to Mexican highland maize (v0.1)"
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Peer Review #2 of "Characterization of introgression from the teosinte Zea mays ssp. mexicana to Mexican highland maize (v0.2)"
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Not so local: the population genetics of convergent adaptation in maize and teosinte
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