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Histologically resolved spatial multi-omics of human oral squamous cell carcinoma
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What this work says
Outgoing claims: the papers this work cites, builds on, or argues with.
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Functional Ultrastructure: Atlas of Tissue Biology and Pathology
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Molecular analysis of H&E- and Papanicolau-stained samples—systematic review
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Polymorphisms in NAT2 and GSTP1 are associated with survival in oral and oropharyngeal cancer
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Single-Cell Map of Diverse Immune Phenotypes in the Breast Tumor Microenvironment
inferredcites →https://doi.org/10.1016/j.clon.2007.08.006openalex-snapshot
p53AIP1 Expression can be a Prognostic Marker in Non-small Cell Lung Cancer
inferredcites →https://doi.org/10.1016/j.tibtech.2020.05.006openalex-snapshot
Uncovering an Organ’s Molecular Architecture at Single-Cell Resolution by Spatially Resolved Transcriptomics
inferredcites →https://doi.org/10.1038/nature11404openalex-snapshot
Comprehensive genomic characterization of squamous cell lung cancers
inferredcites →https://doi.org/10.1038/nature14129openalex-snapshot
Comprehensive genomic characterization of head and neck squamous cell carcinomas
inferredcites →https://doi.org/10.1038/ncomms3612openalex-snapshot
Inferring tumour purity and stromal and immune cell admixture from expression data
inferredcites →https://doi.org/10.1038/nm.3915openalex-snapshot
Toward understanding and exploiting tumor heterogeneity
inferredcites →https://doi.org/10.1038/nm.4352openalex-snapshot
ISDoT: in situ decellularization of tissues for high-resolution imaging and proteomic analysis of native extracellular matrix
inferredcites →https://doi.org/10.1038/nmeth.1923openalex-snapshot
Fast gapped-read alignment with Bowtie 2
inferredcites →https://doi.org/10.1038/nmeth.3578openalex-snapshot
Interactive analysis and assessment of single-cell copy-number variations
inferredcites →https://doi.org/10.1038/nphoton.2012.263openalex-snapshot
High-speed molecular spectral imaging of tissue with stimulated Raman scattering
inferredcites →https://doi.org/10.1038/nprot.2009.236openalex-snapshot
RNA-Seq analysis to capture the transcriptome landscape of a single cell
inferredcites →https://doi.org/10.1038/nrc2091openalex-snapshot
The impact of translocations and gene fusions on cancer causation
inferredcites →https://doi.org/10.1038/nrc3447openalex-snapshot
Regulatory networks defining EMT during cancer initiation and progression
inferredcites →https://doi.org/10.1038/nrc3947openalex-snapshot
The emerging complexity of gene fusions in cancer
inferredcites →https://doi.org/10.1038/nrg3832openalex-snapshot
Spatially resolved transcriptomics and beyond
inferredcites →https://doi.org/10.1038/onc.2013.395openalex-snapshot
Cell type-dependent pathogenic functions of overexpressed human cathepsin B in murine breast cancer progression
inferredcites →https://doi.org/10.1038/s12276-018-0071-8openalex-snapshot
Single-cell RNA sequencing technologies and bioinformatics pipelines
inferredcites →https://doi.org/10.1038/s41551-016-0027openalex-snapshot
Rapid intraoperative histology of unprocessed surgical specimens via fibre-laser-based stimulated Raman scattering microscopy
inferredcites →https://doi.org/10.1038/s41568-019-0185-xopenalex-snapshot
An analysis of genetic heterogeneity in untreated cancers
inferredcites →https://doi.org/10.1038/s41576-019-0114-6openalex-snapshot
Resolving genetic heterogeneity in cancer
inferredcites →https://doi.org/10.1038/s41580-018-0080-4openalex-snapshot
New insights into the mechanisms of epithelial–mesenchymal transition and implications for cancer
inferredcites →https://doi.org/10.1038/s41586-019-1049-yopenalex-snapshot
Transcriptome-scale super-resolved imaging in tissues by RNA seqFISH+
inferredcites →https://doi.org/10.1038/s41587-020-0469-4openalex-snapshot
Benchmarking single-cell RNA-sequencing protocols for cell atlas projects
inferredcites →https://doi.org/10.1038/s41592-019-0548-yopenalex-snapshot
High-definition spatial transcriptomics for in situ tissue profiling
inferredcites →https://doi.org/10.1038/sj.bjc.6601894openalex-snapshot
The COSMIC (Catalogue of Somatic Mutations in Cancer) database and website
inferredcites →https://doi.org/10.1039/c2sc20316bopenalex-snapshot
Label-free chemical imaging in vivo: three-dimensional non-invasive microscopic observation of amphioxus notochord through stimulated Raman scattering (SRS)
inferredcites →https://doi.org/10.1056/nejmoa1006448openalex-snapshot
Anaplastic Lymphoma Kinase Inhibition in Non–Small-Cell Lung Cancer
inferredcites →https://doi.org/10.1056/nejmoa1113205openalex-snapshot
Intratumor Heterogeneity and Branched Evolution Revealed by Multiregion Sequencing
inferredcites →https://doi.org/10.1073/pnas.0907240107openalex-snapshot
Synergistic antitumor effects of combined cathepsin B and cathepsin Z deficiencies on breast cancer progression and metastasis in mice
inferredcites →https://doi.org/10.1093/biostatistics/kxh008openalex-snapshot
Circular binary segmentation for the analysis of array-based DNA copy number data
inferredcites →https://doi.org/10.1093/carcin/bgm246openalex-snapshot
PPP1CA contributes to the senescence program induced by oncogenic Ras
inferredcites →https://doi.org/10.1101/011650openalex-snapshot
FusionCatcher – a tool for finding somatic fusion genes in paired-end RNA-sequencing data
inferredcites →https://doi.org/10.1101/gr.092759.109openalex-snapshot
Circos: An information aesthetic for comparative genomics
inferredcites →https://doi.org/10.1105/tpc.114.135657openalex-snapshot
RNA Sequencing of Laser-Capture Microdissected Compartments of the Maize Kernel Identifies Regulatory Modules Associated with Endosperm Cell Differentiation
inferredcites →https://doi.org/10.1109/cvpr.2005.177openalex-snapshot
Histograms of Oriented Gradients for Human Detection
inferredcites →https://doi.org/10.1111/jop.12229openalex-snapshot
Decreased expression of glutathione S‐transferase pi correlates with poorly differentiated grade in patients with oral squamous cell carcinoma
inferredcites →https://doi.org/10.1126/science.1165758openalex-snapshot
Label-Free Biomedical Imaging with High Sensitivity by Stimulated Raman Scattering Microscopy
inferredcites →https://doi.org/10.1126/science.274.5289.998openalex-snapshot
Laser Capture Microdissection
inferredcites →https://doi.org/10.1126/science.3460176openalex-snapshot
The Chronic Myelogenous Leukemia-Specific P210 Protein Is the Product of the bcr / abl Hybrid Gene
inferredcites →https://doi.org/10.1126/science.aaa6090openalex-snapshot
Spatially resolved, highly multiplexed RNA profiling in single cells
inferredcites →https://doi.org/10.1126/science.aaf2403openalex-snapshot
Visualization and analysis of gene expression in tissue sections by spatial transcriptomics
inferredcites →https://doi.org/10.1126/science.aaw1219openalex-snapshot
Slide-seq: A scalable technology for measuring genome-wide expression at high spatial resolution
inferredcites →https://doi.org/10.1126/scitranslmed.3005954openalex-snapshot
Rapid, Label-Free Detection of Brain Tumors with Stimulated Raman Scattering Microscopy
inferredcites →https://doi.org/10.1126/scitranslmed.aab0195openalex-snapshot
Detection of human brain tumor infiltration with quantitative stimulated Raman scattering microscopy
inferredcites →https://doi.org/10.1146/annurev-anchem-061516-045228openalex-snapshot
Single-Cell Transcriptional Analysis
inferredcites →https://doi.org/10.1146/annurev-genet-102209-163607openalex-snapshot
Genomic Analysis at the Single-Cell Level
inferredcites →https://doi.org/10.1155/2014/184602openalex-snapshot
IL1RN and KRT13 Expression in Bladder Cancer: Association with Pathologic Characteristics and Smoking Status
inferredcites →https://doi.org/10.1186/1471-2164-7-97openalex-snapshot
Histological staining methods preparatory to laser capture microdissection significantly affect the integrity of the cellular RNA
inferredcites →https://doi.org/10.1186/1471-2199-8-25openalex-snapshot
Optimization of laser capture microdissection and RNA amplification for gene expression profiling of prostate cancer
inferredcites →https://doi.org/10.1186/1746-1596-6-1openalex-snapshot
Expression of Plakophilins (PKP1, PKP2, and PKP3) in Gastric Cancers
inferredcites →https://doi.org/10.1186/gb-2003-4-5-p3openalex-snapshot
DAVID: Database for Annotation, Visualization, and Integrated Discovery
inferredcites →https://doi.org/10.1186/gb-2003-4-9-r60openalex-snapshot
DAVID: Database for Annotation, Visualization, and Integrated Discovery
inferredcites →https://doi.org/10.1186/s13059-014-0452-9openalex-snapshot
Cancer genomics: one cell at a time
inferredcites →https://doi.org/10.1186/s13059-018-1593-zopenalex-snapshot
Understanding tumor ecosystems by single-cell sequencing: promises and limitations
inferredcites →https://doi.org/10.1186/s13073-015-0219-2openalex-snapshot
Mutational landscapes of tongue carcinoma reveal recurrent mutations in genes of therapeutic and prognostic relevance
inferredcites →https://doi.org/10.1242/jcs.129684openalex-snapshot
A novel mechanism of keratin cytoskeleton organization through casein kinase Iα and FAM83H in colorectal cancer
inferredcites →https://doi.org/10.14670/hh-24.197openalex-snapshot
Multiple kallikrein (KLK 5, 7, 8, and 10) expression in squamous cell carcinoma of the oral cavity.
inferredcites →https://doi.org/10.4161/fly.19695openalex-snapshot
A program for annotating and predicting the effects of single nucleotide polymorphisms, SnpEff
inferredcites →https://doi.org/10.4248/ijos11068openalex-snapshot
A review of clinical and histological parameters associated with contralateral neck metastases in oral squamous cell carcinoma
inferredcites →https://doi.org/10.7150/thno.43325openalex-snapshot
Quantitative chemical imaging of breast calcifications in association with neoplastic processes
What points at this work
Incoming claims: where this work appears in other papers’ reference lists and arguments.
inferred← citeshttps://doi.org/10.1101/789248openalex-snapshot
Label-free characterization of Amyloid-β-plaques and associated lipids in brain tissues using stimulated Raman scattering microscopy
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