On the public citation graph

BasePlayer: Versatile Analysis Software for Large-scale Genomic Variant Discovery

https://doi.org/10.1101/126482
0 signed · 25 inferred · view as graph

Inferred edges come from two machine sources: sweeps of open repository metadata (mostly SSRN and Zenodo), and a bulk OpenAlex citation snapshot. Every row below is labelled with the one it came from. Neither is a complete citation index — absence here is not evidence of absence.

Is this your work? Sign in with ORCID and put your name on the claims that are yours.
Claim with ORCID
Reference health. See whether every reference in this work resolves to a known work and none has been retracted — and get a dated CiteStamped badge you can embed.
See reference health

What this work says

Outgoing claims: the papers this work cites, builds on, or argues with.

inferredcites →https://doi.org/10.1016/j.ajhg.2012.07.015openalex-snapshot
Loss of SUFU Function in Familial Multiple Meningioma
inferredcites →https://doi.org/10.1016/j.cell.2013.09.006openalex-snapshot
The Next-Generation Sequencing Revolution and Its Impact on Genomics
inferredcites →https://doi.org/10.1038/nature15518openalex-snapshot
DNA-dependent formation of transcription factor pairs alters their binding specificity
inferredcites →https://doi.org/10.1038/nature18912openalex-snapshot
DNA-dependent formation of transcription factor pairs alters their binding specificity
inferredcites →https://doi.org/10.1038/nature19057openalex-snapshot
Analysis of protein-coding genetic variation in 60,706 humans
inferredcites →https://doi.org/10.1038/nbt.1754openalex-snapshot
Integrative genomics viewer
inferredcites →https://doi.org/10.1038/ng.3168openalex-snapshot
Pan-cancer network analysis identifies combinations of rare somatic mutations across pathways and protein complexes
inferredcites →https://doi.org/10.1038/ng.3335openalex-snapshot
CTCF/cohesin-binding sites are frequently mutated in cancer
inferredcites →https://doi.org/10.1038/ng.3448openalex-snapshot
A large genome-wide association study of age-related macular degeneration highlights contributions of rare and common variants
inferredcites →https://doi.org/10.1038/ng.806openalex-snapshot
A framework for variation discovery and genotyping using next-generation DNA sequencing data
inferredcites →https://doi.org/10.1038/nrg3306openalex-snapshot
ChIP–seq and beyond: new and improved methodologies to detect and characterize protein–DNA interactions
inferredcites →https://doi.org/10.1038/nrg3542openalex-snapshot
Single-cell sequencing-based technologies will revolutionize whole-organism science
inferredcites →https://doi.org/10.1093/bioinformatics/btp324openalex-snapshot
Fast and accurate short read alignment with Burrows–Wheeler transform
inferredcites →https://doi.org/10.1093/nar/gkq603openalex-snapshot
ANNOVAR: functional annotation of genetic variants from high-throughput sequencing data
inferredcites →https://doi.org/10.1093/nar/gks1284openalex-snapshot
Integrative annotation of chromatin elements from ENCODE data
inferredcites →https://doi.org/10.1093/nar/gks427openalex-snapshot
Savant Genome Browser 2: visualization and analysis for population-scale genomics
inferredcites →https://doi.org/10.1093/nar/gkv1176openalex-snapshot
JASPAR 2016: a major expansion and update of the open-access database of transcription factor binding profiles
inferredcites →https://doi.org/10.1101/048603openalex-snapshot
Third-generation sequencing and the future of genomics
inferredcites →https://doi.org/10.1101/gr.114819.110openalex-snapshot
Efficient storage of high throughput DNA sequencing data using reference-based compression
inferredcites →https://doi.org/10.1186/1471-2164-12-1openalex-snapshot
Venom gland transcriptomes of two elapid snakes (Bungarus multicinctus and Naja atra) and evolution of toxin genes
inferredcites →https://doi.org/10.1186/1471-2164-12-507openalex-snapshot
Chipster: user-friendly analysis software for microarray and other high-throughput data

What points at this work

Incoming claims: where this work appears in other papers’ reference lists and arguments.

inferred← citeshttps://doi.org/10.1038/s41467-019-11770-0openalex-snapshot
Retrotransposon insertions can initiate colorectal cancer and are associated with poor survival
inferred← citeshttps://doi.org/10.1038/s41598-017-15076-3openalex-snapshot
Detection of subclonal L1 transductions in colorectal cancer by long-distance inverse-PCR and Nanopore sequencing
inferred← citeshttps://doi.org/10.1371/journal.pgen.1007200openalex-snapshot
Exome-wide somatic mutation characterization of small bowel adenocarcinoma
inferred← citeshttps://doi.org/10.15252/emmm.201708552openalex-snapshot
Comprehensive evaluation of coding region point mutations in microsatellite‐unstable colorectal cancer
Editorial review for independent work. ICSAC — the Institute for Complexity Science and Advanced Computing — runs a structured editorial panel for researchers publishing outside journals, and publishes on CiteStamp rails. Submission is free and goes through ORCID: icsacinstitute.org/submit.