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Rapid whole brain imaging of neural activity in freely behaving larval zebrafish ( Danio rerio )

https://doi.org/10.1101/131532
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What this work says

Outgoing claims: the papers this work cites, builds on, or argues with.

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The Lateral Line System
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Proprioceptive regulation of locomotion
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Sparse coding of sensory inputs
inferredcites →https://doi.org/10.1016/j.conb.2015.01.007openalex-snapshot
Large-scale imaging in small brains
inferredcites →https://doi.org/10.1016/j.cub.2010.02.039openalex-snapshot
Circuit Neuroscience in Zebrafish
inferredcites →https://doi.org/10.1016/j.cub.2010.06.072openalex-snapshot
Walking Modulates Speed Sensitivity in Drosophila Motion Vision
inferredcites →https://doi.org/10.1016/j.cub.2012.05.026openalex-snapshot
The Tangential Nucleus Controls a Gravito-inertial Vestibulo-ocular Reflex
inferredcites →https://doi.org/10.1016/j.cub.2012.12.040openalex-snapshot
Real-Time Visualization of Neuronal Activity during Perception
inferredcites →https://doi.org/10.1016/j.cub.2015.01.042openalex-snapshot
Visuomotor Transformations Underlying Hunting Behavior in Zebrafish
inferredcites →https://doi.org/10.1016/j.neuron.2007.08.003openalex-snapshot
Imaging Large-Scale Neural Activity with Cellular Resolution in Awake, Mobile Mice
inferredcites →https://doi.org/10.1016/j.neuron.2008.01.002openalex-snapshot
Genetic Dissection of Neural Circuits
inferredcites →https://doi.org/10.1016/j.neuron.2010.01.033openalex-snapshot
Modulation of Visual Responses by Behavioral State in Mouse Visual Cortex
inferredcites →https://doi.org/10.1016/j.neuron.2014.01.019openalex-snapshot
Whole-Brain Activity Maps Reveal Stereotyped, Distributed Networks for Visuomotor Behavior
inferredcites →https://doi.org/10.1016/j.neuron.2014.06.032openalex-snapshot
Neural Control and Modulation of Swimming Speed in the Larval Zebrafish
inferredcites →https://doi.org/10.1016/j.neuron.2014.09.008openalex-snapshot
The Big Data Problem: Turning Maps into Knowledge
inferredcites →https://doi.org/10.1038/381607a0openalex-snapshot
Emergence of simple-cell receptive field properties by learning a sparse code for natural images
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Multimodal fast optical interrogation of neural circuitry
inferredcites →https://doi.org/10.1038/nature08323openalex-snapshot
Optogenetic dissection of a behavioural module in the vertebrate spinal cord
inferredcites →https://doi.org/10.1038/nature11057openalex-snapshot
Brain-wide neuronal dynamics during motor adaptation in zebrafish
inferredcites →https://doi.org/10.1038/nature12354openalex-snapshot
Ultrasensitive fluorescent proteins for imaging neuronal activity
inferredcites →https://doi.org/10.1038/ncomms8276openalex-snapshot
Direct wavefront sensing for high-resolution in vivo imaging in scattering tissue
inferredcites →https://doi.org/10.1038/nmeth.1398openalex-snapshot
Imaging neural activity in worms, flies and mice with improved GCaMP calcium indicators
inferredcites →https://doi.org/10.1038/nmeth.1411openalex-snapshot
Adaptive optics via pupil segmentation for high-resolution imaging in biological tissues
inferredcites →https://doi.org/10.1038/nmeth.2277openalex-snapshot
Fast multicolor 3D imaging using aberration-corrected multifocus microscopy
inferredcites →https://doi.org/10.1038/nmeth.2434openalex-snapshot
Whole-brain functional imaging at cellular resolution using light-sheet microscopy
inferredcites →https://doi.org/10.1038/nmeth.2925openalex-snapshot
Rapid adaptive optical recovery of optimal resolution over large volumes
inferredcites →https://doi.org/10.1038/nmeth.2964openalex-snapshot
Simultaneous whole-animal 3D imaging of neuronal activity using light-field microscopy
inferredcites →https://doi.org/10.1038/nmeth.4218openalex-snapshot
Adaptive optical fluorescence microscopy
inferredcites →https://doi.org/10.1038/nmeth.4341openalex-snapshot
Video rate volumetric Ca2+ imaging across cortex using seeded iterative demixing (SID) microscopy
inferredcites →https://doi.org/10.1038/nn.2492openalex-snapshot
Active flight increases the gain of visual motion processing in Drosophila
inferredcites →https://doi.org/10.1038/nn.2518openalex-snapshot
Monitoring neural activity with bioluminescence during natural behavior
inferredcites →https://doi.org/10.1038/nn.3709openalex-snapshot
High-fidelity optical reporting of neuronal electrical activity with an ultrafast fluorescent voltage sensor
inferredcites →https://doi.org/10.1038/nn1525openalex-snapshot
Millisecond-timescale, genetically targeted optical control of neural activity
inferredcites →https://doi.org/10.1038/nrn2338openalex-snapshot
Imaging in vivo: watching the brain in action
inferredcites →https://doi.org/10.1038/nrn3687openalex-snapshot
The log-dynamic brain: how skewed distributions affect network operations
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How to Track Bacteria
inferredcites →https://doi.org/10.1073/pnas.1507109113openalex-snapshot
Pan-neuronal imaging in roaming Caenorhabditis elegans
inferredcites →https://doi.org/10.1073/pnas.1507110112openalex-snapshot
Whole-brain calcium imaging with cellular resolution in freely behaving Caenorhabditis elegans
inferredcites →https://doi.org/10.1093/toxsci/kfg241openalex-snapshot
Neurodevelopmental Defects in Zebrafish (Danio rerio) at Environmentally Relevant Dioxin (TCDD) Concentrations
inferredcites →https://doi.org/10.1098/rsbl.2009.0995openalex-snapshot
Organization and physiology of posterior lateral line afferent neurons in larval zebrafish
inferredcites →https://doi.org/10.1109/34.121783openalex-snapshot
Single lens stereo with a plenoptic camera
inferredcites →https://doi.org/10.1117/12.909882openalex-snapshot
Single lens 3D-camera with extended depth-of-field
inferredcites →https://doi.org/10.1126/science.7291985openalex-snapshot
An Efference Copy Which Is Modified by Reafferent Input
inferredcites →https://doi.org/10.1145/1141911.1141976openalex-snapshot
Light field microscopy
inferredcites →https://doi.org/10.1242/jeb.087742openalex-snapshot
Visually guided gradation of prey capture movements in larval zebrafish
inferredcites →https://doi.org/10.1364/oe.21.025418openalex-snapshot
Wave optics theory and 3-D deconvolution for the light field microscope
inferredcites →https://doi.org/10.1364/optica.3.000517openalex-snapshot
Compressive light-field microscopy for 3D neural activity recording
inferredcites →https://doi.org/10.1371/journal.pbio.0060016openalex-snapshot
Sparse Representation of Sounds in the Unanesthetized Auditory Cortex
inferredcites →https://doi.org/10.3389/fncir.2012.00125openalex-snapshot
Fish in the matrix: motor learning in a virtual world
inferredcites →https://doi.org/10.3389/fncir.2013.00086openalex-snapshot
Visually driven chaining of elementary swim patterns into a goal-directed motor sequence: a virtual reality study of zebrafish prey capture
inferredcites →https://doi.org/10.3389/fnsys.2011.00072openalex-snapshot
Adaptive Locomotor Behavior in Larval Zebrafish
inferredcites →https://doi.org/10.3389/fnsys.2011.00101openalex-snapshot
Prey Capture Behavior Evoked by Simple Visual Stimuli in Larval Zebrafish
inferredcites →https://doi.org/10.7554/elife.04878openalex-snapshot
A dedicated visual pathway for prey detection in larval zebrafish

What points at this work

Incoming claims: where this work appears in other papers’ reference lists and arguments.

inferred← citeshttps://doi.org/10.1016/j.conb.2017.08.006openalex-snapshot
Quantifying behavior to solve sensorimotor transformations: advances from worms and flies
inferred← citeshttps://doi.org/10.1016/j.conb.2018.04.007openalex-snapshot
Neural data science: accelerating the experiment-analysis-theory cycle in large-scale neuroscience
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