On the public citation graph

Organ-specific NLR resistance gene expression varies with plant symbiotic status

https://doi.org/10.1101/135764
0 signed · 113 inferred · view as graph

Inferred edges come from two machine sources: sweeps of open repository metadata (mostly SSRN and Zenodo), and a bulk OpenAlex citation snapshot. Every row below is labelled with the one it came from. Neither is a complete citation index — absence here is not evidence of absence.

Is this your work? Sign in with ORCID and put your name on the claims that are yours.
Claim with ORCID
Reference health. See whether every reference in this work resolves to a known work and none has been retracted — and get a dated CiteStamped badge you can embed.
See reference health

What this work says

Outgoing claims: the papers this work cites, builds on, or argues with.

inferredcites →https://doi.org/10.1007/bf02668879openalex-snapshot
Medicago truncatula, a model plant for studying the molecular genetics of theRhizobium-legume symbiosis
inferredcites →https://doi.org/10.1007/s002399910023openalex-snapshot
Divergent Evolution of Plant NBS-LRR Resistance Gene Homologues in Dicot and Cereal Genomes
inferredcites →https://doi.org/10.1007/s00284-013-0469-4openalex-snapshot
A nopA Deletion Mutant of Sinorhizobium fredii USDA257, a Soybean Symbiont, is Impaired in Nodulation
inferredcites →https://doi.org/10.1007/s11101-008-9101-9openalex-snapshot
Root and shoot glucosinolates: a comparison of their diversity, function and interactions in natural and managed ecosystems
inferredcites →https://doi.org/10.1007/s12038-013-9302-2openalex-snapshot
Plant innate immunity: An updated insight into defense mechanism
inferredcites →https://doi.org/10.1016/0092-8674(89)90893-3openalex-snapshot
Rhizobium-legume nodulation: Life together in the underground
inferredcites →https://doi.org/10.1016/0968-0004(90)90281-fopenalex-snapshot
The P-loop — a common motif in ATP- and GTP-binding proteins
inferredcites →https://doi.org/10.1016/j.cell.2009.02.036openalex-snapshot
Autophagic Components Contribute to Hypersensitive Cell Death in Arabidopsis
inferredcites →https://doi.org/10.1016/j.coi.2011.12.006openalex-snapshot
A new eye on NLR proteins: focused on clarity or diffused by complexity?
inferredcites →https://doi.org/10.1016/j.mib.2015.10.006openalex-snapshot
Of guards, decoys, baits and traps: pathogen perception in plants by type III effector sensors
inferredcites →https://doi.org/10.1016/j.molcel.2007.08.014openalex-snapshot
How Integration of Positive and Negative Regulatory Signals by a STAND Signaling Protein Depends on ATP Hydrolysis
inferredcites →https://doi.org/10.1016/j.pbi.2006.05.003openalex-snapshot
Nuclear calcium changes at the core of symbiosis signalling
inferredcites →https://doi.org/10.1016/j.pbi.2006.05.009openalex-snapshot
Resistance proteins: molecular switches of plant defence
inferredcites →https://doi.org/10.1016/j.pbi.2009.03.001openalex-snapshot
STANDing strong, resistance proteins instigators of plant defence
inferredcites →https://doi.org/10.1016/j.pbi.2012.04.002openalex-snapshot
Activation of calcium- and calmodulin-dependent protein kinase (CCaMK), the central regulator of plant root endosymbiosis
inferredcites →https://doi.org/10.1016/j.pbi.2012.05.001openalex-snapshot
How to build a pathogen detector: structural basis of NB-LRR function
inferredcites →https://doi.org/10.1016/j.semcancer.2006.12.001openalex-snapshot
Inducible cell death in plant immunity
inferredcites →https://doi.org/10.1016/j.tplants.2009.08.006openalex-snapshot
The underestimated role of roots in defense against leaf attackers
inferredcites →https://doi.org/10.1016/s0065-2296(08)60072-5openalex-snapshot
The Role of Leucine-Rich Repeat Proteins in Plant Defences
inferredcites →https://doi.org/10.1016/s0960-9822(98)70145-9openalex-snapshot
The NB-ARC domain: a novel signalling motif shared by plant resistance gene products and regulators of cell death in animals
inferredcites →https://doi.org/10.1016/s1369-5266(00)00088-1openalex-snapshot
Intracellular accommodation of microbes by plants: a common developmental program for symbiosis and disease?
inferredcites →https://doi.org/10.1016/s1369-5266(03)00063-3openalex-snapshot
Fresh insights into processes of nonhost resistance
inferredcites →https://doi.org/10.1023/a:1006396525292openalex-snapshot
The evolution of nodulation
inferredcites →https://doi.org/10.1038/46058openalex-snapshot
A plant regulator controlling development of symbiotic root nodules
inferredcites →https://doi.org/10.1038/msb.2011.75openalex-snapshot
Fast, scalable generation of high‐quality protein multiple sequence alignments using Clustal Omega
inferredcites →https://doi.org/10.1038/nature02039openalex-snapshot
Plant recognition of symbiotic bacteria requires two LysM receptor-like kinases
inferredcites →https://doi.org/10.1038/nature02045openalex-snapshot
A receptor kinase gene of the LysM type is involved in legumeperception of rhizobial signals
inferredcites →https://doi.org/10.1038/nature04862openalex-snapshot
Deregulation of a Ca2+/calmodulin-dependent kinase leads to spontaneous nodule development
inferredcites →https://doi.org/10.1038/nature05286openalex-snapshot
The plant immune system
inferredcites →https://doi.org/10.1038/nature09766openalex-snapshot
Timing of plant immune responses by a central circadian regulator
inferredcites →https://doi.org/10.1038/nature12132openalex-snapshot
Architecture and evolution of a minute plant genome
inferredcites →https://doi.org/10.1038/nature14611openalex-snapshot
Receptor-mediated exopolysaccharide perception controls bacterial infection
inferredcites →https://doi.org/10.1038/ncomms1009openalex-snapshot
The molecular network governing nodule organogenesis and infection in the model legume Lotus japonicus
inferredcites →https://doi.org/10.1038/ncomms11095openalex-snapshot
Identification of plant vacuolar transporters mediating phosphate storage
inferredcites →https://doi.org/10.1038/ng1543openalex-snapshot
A gene expression map of Arabidopsis thaliana development
inferredcites →https://doi.org/10.1038/ni.3124openalex-snapshot
A lectin S-domain receptor kinase mediates lipopolysaccharide sensing in Arabidopsis thaliana
inferredcites →https://doi.org/10.1038/nprot.2013.084openalex-snapshot
De novo transcript sequence reconstruction from RNA-Seq: reference generation and analysis with Trinity
inferredcites →https://doi.org/10.1038/nrmicro1987openalex-snapshot
Arbuscular mycorrhiza: the mother of plant root endosymbioses
inferredcites →https://doi.org/10.1038/nrmicro2990openalex-snapshot
Speak, friend, and enter: signalling systems that promote beneficial symbiotic associations in plants
inferredcites →https://doi.org/10.1038/sj.emboj.7601826openalex-snapshot
LysM domains mediate lipochitin–oligosaccharide recognition and Nfr genes extend the symbiotic host range
inferredcites →https://doi.org/10.1038/srep39447openalex-snapshot
Lotus Base: An integrated information portal for the model legume Lotus japonicus
inferredcites →https://doi.org/10.1046/j.1365-2958.1998.00920.xopenalex-snapshot
Symbiotic implications of type III protein secretion machinery in Rhizobium
inferredcites →https://doi.org/10.1046/j.1365-313x.1999.00606.xopenalex-snapshot
Plant disease resistance genes encode members of an ancient and diverse protein family within the nucleotide-binding superfamily
inferredcites →https://doi.org/10.1046/j.1365-313x.2002.01404.xopenalex-snapshot
TIR‐X and TIR‐NBS proteins: two new families related to disease resistance TIR‐NBS‐LRR proteins encoded in Arabidopsis and other plant genomes
inferredcites →https://doi.org/10.1073/pnas.1113726108openalex-snapshot
Expanded functions for a family of plant intracellular immune receptors beyond specific recognition of pathogen effectors
inferredcites →https://doi.org/10.1073/pnas.95.17.10306openalex-snapshot
Different requirements for EDS1 and NDR1 by disease resistance genes define at least two R gene-mediated signaling pathways in Arabidopsis
inferredcites →https://doi.org/10.1073/pnas.96.6.3292openalex-snapshot
EDS1 , an essential component of R gene-mediated disease resistance in Arabidopsis has homology to eukaryotic lipases
inferredcites →https://doi.org/10.1074/jbc.m111.265942openalex-snapshot
Functional Analysis of the Type 3 Effector Nodulation Outer Protein L (NopL) from Rhizobium sp. NGR234
inferredcites →https://doi.org/10.1093/bioinformatics/bts565openalex-snapshot
CD-HIT: accelerated for clustering the next-generation sequencing data
inferredcites →https://doi.org/10.1093/bioinformatics/bts635openalex-snapshot
STAR: ultrafast universal RNA-seq aligner
inferredcites →https://doi.org/10.1093/dnares/dsm014openalex-snapshot
Transcriptome Profiling of Lotus japonicus Roots During Arbuscular Mycorrhiza Development and Comparison with that of Nodulation
inferredcites →https://doi.org/10.1093/jxb/ers262openalex-snapshot
Microbial recognition and evasion of host immunity
inferredcites →https://doi.org/10.1093/molbev/mst024openalex-snapshot
Ultrafast Approximation for Phylogenetic Bootstrap
inferredcites →https://doi.org/10.1093/molbev/msu300openalex-snapshot
IQ-TREE: A Fast and Effective Stochastic Algorithm for Estimating Maximum-Likelihood Phylogenies
inferredcites →https://doi.org/10.1093/nar/gkq1189openalex-snapshot
CDD: a Conserved Domain Database for the functional annotation of proteins
inferredcites →https://doi.org/10.1093/nar/gkr938openalex-snapshot
PLEXdb: gene expression resources for plants and plant pathogens
inferredcites →https://doi.org/10.1093/pcp/pcn153openalex-snapshot
Divergence of Evolutionary Ways Among Common sym Genes: CASTOR and CCaMK Show Functional Conservation Between Two Symbiosis Systems and Constitute the Root of a Common Signaling Pathway
inferredcites →https://doi.org/10.1093/pcp/pcq107openalex-snapshot
How Many Peas in a Pod? Legume Genes Responsible for Mutualistic Symbioses Underground
inferredcites →https://doi.org/10.1093/sysbio/sys062openalex-snapshot
Dendroscope 3: An Interactive Tool for Rooted Phylogenetic Trees and Networks
inferredcites →https://doi.org/10.1094/mpmi-01-15-0020-ropenalex-snapshot
The Sinorhizobium ( Ensifer ) fredii HH103 Type 3 Secretion System Suppresses Early Defense Responses to Effectively Nodulate Soybean
inferredcites →https://doi.org/10.1094/mpmi-05-11-0114openalex-snapshot
Phylogenetic Perspectives on the Origins of Nodulation
inferredcites →https://doi.org/10.1099/00221287-143-4-1381openalex-snapshot
The soybean cultivar specificity gene noIX is present, expressed in a nodD-dependent manner, and of symbiotic significance in cultivar-nonspecific strains of Rhizobium (Sinorhizobium) fredii
inferredcites →https://doi.org/10.1104/pp.010763openalex-snapshot
Sentinels of Disease. Plant Resistance Genes
inferredcites →https://doi.org/10.1104/pp.103.031740openalex-snapshot
NopL, an Effector Protein ofRhizobiumsp. NGR234, Thwarts Activation of Plant Defense Reactions
inferredcites →https://doi.org/10.1104/pp.112.209254openalex-snapshot
An RNA-Seq Transcriptome Analysis of Orthophosphate-Deficient White Lupin Reveals Novel Insights into Phosphorus Acclimation in Plants
inferredcites →https://doi.org/10.1104/pp.113.219162openalex-snapshot
The Role of TIR-NBS and TIR-X Proteins in Plant Basal Defense Responses
inferredcites →https://doi.org/10.1104/pp.15.01487openalex-snapshot
Large-Scale Analyses of Angiosperm Nucleotide-Binding Site-Leucine-Rich Repeat Genes Reveal Three Anciently Diverged Classes with Distinct Evolutionary Patterns
inferredcites →https://doi.org/10.1104/pp.15.01661openalex-snapshot
Rj4, a Gene Controlling Nodulation Specificity in Soybeans, Encodes a Thaumatin-Like Protein But Not the One Previously Reported
inferredcites →https://doi.org/10.1104/pp.16.00472openalex-snapshot
Transcriptomes of eight Arabidopsis thaliana accessions reveal core conserved, genotype- and organ-specific responses to flooding stress
inferredcites →https://doi.org/10.1105/tpc.009308openalex-snapshot
Genome-Wide Analysis of NBS-LRR–Encoding Genes in Arabidopsis[W]
inferredcites →https://doi.org/10.1105/tpc.104.026765openalex-snapshot
The N Terminus of Bacterial Elongation Factor Tu Elicits Innate Immunity in Arabidopsis Plants
inferredcites →https://doi.org/10.1105/tpc.109.069658openalex-snapshot
Innate Immune Responses Activated in Arabidopsis Roots by Microbe-Associated Molecular Patterns
inferredcites →https://doi.org/10.1111/j.1365-2958.1993.tb01665.xopenalex-snapshot
Molecular cloning and characterization of a sym plasmid locus that regulates cultivar‐specific nodulation of soybean by Rhizobium fredii USDA257
inferredcites →https://doi.org/10.1111/j.1365-2958.2005.04768.xopenalex-snapshot
NopP, a phosphorylated effector of Rhizobium sp. strain NGR234, is a major determinant of nodulation of the tropical legumes Flemingia congesta and Tephrosia vogelii
inferredcites →https://doi.org/10.1111/j.1365-2958.2008.06507.xopenalex-snapshot
Rhizobia utilize pathogen‐like effector proteins during symbiosis
inferredcites →https://doi.org/10.1111/j.1365-313x.1992.00487.xopenalex-snapshot
Lotus japonicus , an autogamous, diploid legume species for classical and molecular genetics
inferredcites →https://doi.org/10.1111/j.1365-313x.2010.04131.xopenalex-snapshot
Arabidopsis and the plant immune system
inferredcites →https://doi.org/10.1111/j.1469-8137.2011.04006.xopenalex-snapshot
Tracing the origin and evolutionary history of plant nucleotide‐binding site–leucine‐rich repeat (NBS‐LRR) genes
inferredcites →https://doi.org/10.1111/j.1747-0765.2007.00225.xopenalex-snapshot
Tn5mutants ofBradyrhizobium japonicumIs-1 with altered compatibility withRj2-soybean cultivars
inferredcites →https://doi.org/10.1111/nph.13312openalex-snapshot
The importance of the microbiome of the plant holobiont
inferredcites →https://doi.org/10.1111/nph.13869openalex-snapshot
Integration of decoy domains derived from protein targets of pathogen effectors into plant immune receptors is widespread
inferredcites →https://doi.org/10.1111/tpj.12119openalex-snapshot
Establishment of the L otus japonicus Gene Expression Atlas ( L j GEA ) and its use to explore legume seed maturation
inferredcites →https://doi.org/10.1126/science.1090074openalex-snapshot
LysM Domain Receptor Kinases Regulating Rhizobial Nod Factor-Induced Infection
inferredcites →https://doi.org/10.1126/science.1093038openalex-snapshot
A Putative Ca 2+ and Calmodulin-Dependent Protein Kinase Required for Bacterial and Fungal Symbioses
inferredcites →https://doi.org/10.1126/science.1110951openalex-snapshot
Nodulation Signaling in Legumes Requires NSP2, a Member of the GRAS Family of Transcriptional Regulators
inferredcites →https://doi.org/10.1126/science.1111025openalex-snapshot
NSP1 of the GRAS Protein Family Is Essential for Rhizobial Nod Factor-Induced Transcription
inferredcites →https://doi.org/10.1126/science.291.5501.118openalex-snapshot
Broad-Spectrum Mildew Resistance in Arabidopsis thaliana Mediated by RPW8
inferredcites →https://doi.org/10.1128/aem.03297-12openalex-snapshot
The Type III Secretion System of Bradyrhizobium japonicum USDA122 Mediates Symbiotic Incompatibility with Rj2 Soybean Plants
inferredcites →https://doi.org/10.1146/annurev-arplant-050312-120106openalex-snapshot
Structure and Functions of the Bacterial Microbiota of Plants
inferredcites →https://doi.org/10.1146/annurev-cellbio-102314-112502openalex-snapshot
Modulation of Host Cell Biology by Plant Pathogenic Microbes
inferredcites →https://doi.org/10.1146/annurev-phyto-082712-102321openalex-snapshot
Pseudomonas syringae pv. tomato DC3000: A Model Pathogen for Probing Disease Susceptibility and Hormone Signaling in Plants
inferredcites →https://doi.org/10.1155/2014/467395openalex-snapshot
Comparative Transcriptome Analysis of Leaves and Roots in Response to Sudden Increase in Salinity in Brassica napus by RNA-seq
inferredcites →https://doi.org/10.1186/1471-2105-10-441openalex-snapshot
The Medicago truncatula gene expression atlas web server
inferredcites →https://doi.org/10.1186/1471-2164-14-689openalex-snapshot
Comprehensive analysis of RNA-seq data reveals the complexity of the transcriptome in Brassica rapa
inferredcites →https://doi.org/10.1186/1756-0500-2-155openalex-snapshot
ColorTree: a batch customization tool for phylogenic trees
inferredcites →https://doi.org/10.1186/1756-0500-2-197openalex-snapshot
TIR-NBS-LRR genes are rare in monocots: evidence from diverse monocot orders
inferredcites →https://doi.org/10.1371/journal.pcbi.1002195openalex-snapshot
Accelerated Profile HMM Searches
inferredcites →https://doi.org/10.1371/journal.pgen.1004487openalex-snapshot
Comparative Phylogenomics Uncovers the Impact of Symbiotic Associations on Host Genome Evolution
inferredcites →https://doi.org/10.1371/journal.pone.0006556openalex-snapshot
Dissection of Symbiosis and Organ Development by Integrated Transcriptome Analysis of Lotus japonicus Mutant and Wild-Type Plants
inferredcites →https://doi.org/10.1371/journal.pone.0026968openalex-snapshot
Defence Responses of Arabidopsis thaliana to Infection by Pseudomonas syringae Are Regulated by the Circadian Clock
inferredcites →https://doi.org/10.1371/journal.pone.0036700openalex-snapshot
A Primary Survey on Bryophyte Species Reveals Two Novel Classes of Nucleotide-Binding Site (NBS) Genes
inferredcites →https://doi.org/10.1371/journal.pone.0095118openalex-snapshot
Physcomitrella patens Has Kinase-LRR R Gene Homologs and Interacting Proteins
inferredcites →https://doi.org/10.1371/journal.ppat.1002707openalex-snapshot
Functional Analysis of NopM, a Novel E3 Ubiquitin Ligase (NEL) Domain Effector of Rhizobium sp. Strain NGR234
inferredcites →https://doi.org/10.3389/fimmu.2013.00297openalex-snapshot
Evolution and Conservation of Plant NLR Functions
inferredcites →https://doi.org/10.3389/fpls.2015.00750openalex-snapshot
Plant and pathogen nutrient acquisition strategies
inferredcites →https://doi.org/10.3389/fpls.2016.01704openalex-snapshot
NIN Is Involved in the Regulation of Arbuscular Mycorrhizal Symbiosis

What points at this work

Incoming claims: where this work appears in other papers’ reference lists and arguments.

inferred← citeshttps://doi.org/10.1016/j.pbi.2019.04.007openalex-snapshot
NLR singletons, pairs, and networks: evolution, assembly, and regulation of the intracellular immunoreceptor circuitry of plants
inferred← citeshttps://doi.org/10.1111/mpp.12607openalex-snapshot
Transcript‐level expression control of plant NLR genes
inferred← citeshttps://doi.org/10.1111/mpp.13066openalex-snapshot
The Beta vulgaris‐derived resistance gene Rz2 confers broad‐spectrum resistance against soilborne sugar beet‐infecting viruses from different families by recognizing triple gene block protein 1
inferred← citeshttps://doi.org/10.1111/nph.18672openalex-snapshot
Multiple chromatin‐associated modules regulate expression of an intracellular immune receptor gene in Arabidopsis
inferred← citeshttps://doi.org/10.3390/ijms19061662openalex-snapshot
Regulation and Evolution of NLR Genes: A Close Interconnection for Plant Immunity
inferred← citeshttps://doi.org/10.64898/2026.01.25.701577openalex-snapshot
NLR immune receptors can exhibit tissue-specific expression patterns across legume species
inferred← citeshttps://doi.org/10.70675/5fb1d22az78a0z4905z85c0z0966c8f648c1openalex-snapshot
Genome scale analysis of Arabidopsis thaliana quantitative disease resistance to the generalist fungal pathogen Sclerotinia sclerotiorum
Editorial review for independent work. ICSAC — the Institute for Complexity Science and Advanced Computing — runs a structured editorial panel for researchers publishing outside journals, and publishes on CiteStamp rails. Submission is free and goes through ORCID: icsacinstitute.org/submit.