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Reconstruction of body mass evolution in the Cetartiodactyla and mammals using phylogenomic data

https://doi.org/10.1101/139147
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Outgoing claims: the papers this work cites, builds on, or argues with.

inferredcites →https://doi.org/10.1007/bf02111276openalex-snapshot
Very slightly deleterious mutations and the molecular clock
inferredcites →https://doi.org/10.1007/bf02202109openalex-snapshot
Determinants of rate variation in mammalian DNA sequence evolution
inferredcites →https://doi.org/10.1016/j.crvi.2011.11.002openalex-snapshot
Pattern and timing of diversification of Cetartiodactyla (Mammalia, Laurasiatheria), as revealed by a comprehensive analysis of mitochondrial genomes
inferredcites →https://doi.org/10.1016/j.cub.2017.08.043openalex-snapshot
Rates of Molecular Evolution Suggest Natural History of Life History Traits and a Post-K-Pg Nocturnal Bottleneck of Placentals
inferredcites →https://doi.org/10.1016/j.tree.2007.03.007openalex-snapshot
Relationships between body size and abundance in ecology
inferredcites →https://doi.org/10.1016/j.ympev.2008.05.046openalex-snapshot
The phylogeny of Cetartiodactyla: The importance of dense taxon sampling, missing data, and the remarkable promise of cytochrome b to provide reliable species-level phylogenies
inferredcites →https://doi.org/10.1016/j.ympev.2012.04.012openalex-snapshot
Resolution of the laurasiatherian phylogeny: Evidence from genomic data
inferredcites →https://doi.org/10.1016/j.ympev.2016.09.017openalex-snapshot
Waking the undead: Implications of a soft explosive model for the timing of placental mammal diversification
inferredcites →https://doi.org/10.1016/s0169-5347(98)01382-2openalex-snapshot
Reconstructing ancestral character states: a critical reappraisal
inferredcites →https://doi.org/10.1017/s0016756811000586openalex-snapshot
Eocene raoellids (Mammalia, Cetartiodactyla) outside the Indian Subcontinent: palaeogeographical implications
inferredcites →https://doi.org/10.1017/s1464793105006743openalex-snapshot
A complete phylogeny of the whales, dolphins and even‐toed hoofed mammals (Cetartiodactyla)
inferredcites →https://doi.org/10.1038/290699a0openalex-snapshot
Population density and body size in mammals
inferredcites →https://doi.org/10.1038/35102048openalex-snapshot
Late Cretaceous relatives of rabbits, rodents, and other extant eutherian mammals
inferredcites →https://doi.org/10.1038/nature05854openalex-snapshot
Cretaceous eutherians and Laurasian origin for placental mammals near the K/T boundary
inferredcites →https://doi.org/10.1038/ncomms6188openalex-snapshot
Camelid genomes reveal evolution and adaptation to desert environments
inferredcites →https://doi.org/10.1038/ng.2835openalex-snapshot
Minke whale genome and aquatic adaptation in cetaceans
inferredcites →https://doi.org/10.1073/pnas.0603797103openalex-snapshot
Pegasoferae, an unexpected mammalian clade revealed by tracking ancient retroposon insertions
inferredcites →https://doi.org/10.1073/pnas.0701256104openalex-snapshot
Accumulation of slightly deleterious mutations in mitochondrial protein-coding genes of large versus small mammals
inferredcites →https://doi.org/10.1073/pnas.0705658104openalex-snapshot
Life-history traits drive the evolutionary rates of mammalian coding and noncoding genomic elements
inferredcites →https://doi.org/10.1073/pnas.1108723108openalex-snapshot
A radiation of arboreal basal eutherian mammals beginning in the Late Cretaceous of India
inferredcites →https://doi.org/10.1073/pnas.90.9.4087openalex-snapshot
Body size, metabolic rate, generation time, and the molecular clock.
inferredcites →https://doi.org/10.1086/284325openalex-snapshot
Phylogenies and the Comparative Method
inferredcites →https://doi.org/10.1093/bioinformatics/btl446openalex-snapshot
RAxML-VI-HPC: maximum likelihood-based phylogenetic analyses with thousands of taxa and mixed models
inferredcites →https://doi.org/10.1093/bioinformatics/btu485openalex-snapshot
Monte Carlo algorithms for Brownian phylogenetic models
inferredcites →https://doi.org/10.1093/dnares/dsv011openalex-snapshot
Whole-genome resequencing analyses of five pig breeds, including Korean wild and native, and three European origin breeds
inferredcites →https://doi.org/10.1093/genetics/159.2.907openalex-snapshot
GC-Content Evolution in Mammalian Genomes: The Biased Gene Conversion Hypothesis
inferredcites →https://doi.org/10.1093/molbev/msi136openalex-snapshot
Male-Driven Biased Gene Conversion Governs the Evolution of Base Composition in Human Alu Repeats
inferredcites →https://doi.org/10.1093/molbev/msm088openalex-snapshot
PAML 4: Phylogenetic Analysis by Maximum Likelihood
inferredcites →https://doi.org/10.1093/molbev/msm248openalex-snapshot
Strong Variations of Mitochondrial Mutation Rate across Mammals--the Longevity Hypothesis
inferredcites →https://doi.org/10.1093/molbev/msq244openalex-snapshot
A Phylogenetic Model for Investigating Correlated Evolution of Substitution Rates and Continuous Phenotypic Characters
inferredcites →https://doi.org/10.1093/molbev/msr098openalex-snapshot
Adaptation to Environmental Temperature Is a Major Determinant of Molecular Evolutionary Rates in Archaea
inferredcites →https://doi.org/10.1093/molbev/mss059openalex-snapshot
Efficient Selection of Branch-Specific Models of Sequence Evolution
inferredcites →https://doi.org/10.1093/molbev/mss211openalex-snapshot
Genomic Evidence for Large, Long-Lived Ancestors to Placental Mammals
inferredcites →https://doi.org/10.1093/molbev/mss239openalex-snapshot
Phylogenetic Patterns of GC-Biased Gene Conversion in Placental Mammals and the Evolutionary Dynamics of Recombination Landscapes
inferredcites →https://doi.org/10.1093/molbev/msw033openalex-snapshot
Life History Traits, Protein Evolution, and the Nearly Neutral Theory in Amniotes
inferredcites →https://doi.org/10.1093/molbev/msw197openalex-snapshot
Gene Tree Discordance Can Generate Patterns of Diminishing Convergence over Time
inferredcites →https://doi.org/10.1093/oxfordjournals.molbev.a004083openalex-snapshot
Molecular Clocks in Reptiles: Life History Influences Rate of Molecular Evolution
inferredcites →https://doi.org/10.1093/oxfordjournals.molbev.a025991openalex-snapshot
Inferring pattern and process: maximum-likelihood implementation of a nonhomogeneous model of DNA sequence evolution for phylogenetic analysis
inferredcites →https://doi.org/10.1093/sysbio/syv075openalex-snapshot
Testing for Depéret's Rule (Body Size Increase) in Mammals using Combined Extinct and Extant Data
inferredcites →https://doi.org/10.1093/sysbio/syw082openalex-snapshot
Incomplete Lineage Sorting in Mammalian Phylogenomics
inferredcites →https://doi.org/10.1098/rsbl.2013.1003openalex-snapshot
Neither phylogenomic nor palaeontological data support a Palaeogene origin of placental mammals
inferredcites →https://doi.org/10.1098/rspb.2005.3217openalex-snapshot
Population size and molecular evolution on islands
inferredcites →https://doi.org/10.1098/rspb.2012.0683openalex-snapshot
Phylogenomic datasets provide both precision and accuracy in estimating the timescale of placental mammal phylogeny
inferredcites →https://doi.org/10.1098/rstb.2015.0136openalex-snapshot
Closing the gap between rocks and clocks using total-evidence dating
inferredcites →https://doi.org/10.1101/gr.104372.109openalex-snapshot
Contrasting GC-content dynamics across 33 mammalian genomes: Relationship with life-history traits and chromosome sizes
inferredcites →https://doi.org/10.1101/gr.1224503openalex-snapshot
OrthoMCL: Identification of Ortholog Groups for Eukaryotic Genomes
inferredcites →https://doi.org/10.1101/gr.5918807openalex-snapshot
Using genomic data to unravel the root of the placental mammal phylogeny
inferredcites →https://doi.org/10.1111/1475-4983.00203openalex-snapshot
A New Species of Amphirhagatherium (Choeropotamidae, Artiodactyla, Mammalia) from the Late Eocene Headon Hill Formation of Southern England and Phylogeny of Endemic European ‘anthracotherioids’
inferredcites →https://doi.org/10.1111/evo.12197openalex-snapshot
THE EVOLUTIONARY HISTORY OF CETACEAN BRAIN AND BODY SIZE
inferredcites →https://doi.org/10.1111/evo.12832openalex-snapshot
Irrational exuberance for resolved species trees
inferredcites →https://doi.org/10.1111/j.0014-3820.2000.tb00042.xopenalex-snapshot
INDEPENDENT CONTRASTS SUCCEED WHERE ANCESTOR RECONSTRUCTION FAILS IN A KNOWN BACTERIOPHAGE PHYLOGENY
inferredcites →https://doi.org/10.1111/j.1095-8312.1987.tb01990.xopenalex-snapshot
Interspecific allometry of population density in mammals and other animals: the independence of body mass and population energy-use
inferredcites →https://doi.org/10.1111/j.1420-9101.2009.01783.xopenalex-snapshot
A database of vertebrate longevity records and their relation to other life‐history traits
inferredcites →https://doi.org/10.1111/j.1558-5646.1989.tb02565.xopenalex-snapshot
PHYLOGENIES AND THE ANALYSIS OF EVOLUTIONARY SEQUENCES, WITH EXAMPLES FROM SEED PLANTS
inferredcites →https://doi.org/10.1111/j.1558-5646.2011.01558.xopenalex-snapshot
JOINT RECONSTRUCTION OF DIVERGENCE TIMES AND LIFE-HISTORY EVOLUTION IN PLACENTAL MAMMALS USING A PHYLOGENETIC COVARIANCE MODEL
inferredcites →https://doi.org/10.1111/j.1558-5646.2012.01619.xopenalex-snapshot
MODELING STABILIZING SELECTION: EXPANDING THE ORNSTEIN-UHLENBECK MODEL OF ADAPTIVE EVOLUTION
inferredcites →https://doi.org/10.1111/j.1755-0998.2012.03148.xopenalex-snapshot
Reference‐free transcriptome assembly in non‐model animals from next‐generation sequencing data
inferredcites →https://doi.org/10.1111/jeb.12031openalex-snapshot
The determinants of the molecular substitution process in turtles
inferredcites →https://doi.org/10.1111/jeb.12361openalex-snapshot
Mitochondrial DNA as a tool for reconstructing past life‐history traits in mammals
inferredcites →https://doi.org/10.1111/mec.13415openalex-snapshot
Whole‐genome resequencing uncovers molecular signatures of natural and sexual selection in wild bighorn sheep
inferredcites →https://doi.org/10.1126/science.1107808openalex-snapshot
Stem Lagomorpha and the Antiquity of Glires
inferredcites →https://doi.org/10.1126/science.1211028openalex-snapshot
Impacts of the Cretaceous Terrestrial Revolution and KPg Extinction on Mammal Diversification
inferredcites →https://doi.org/10.1126/science.1260065openalex-snapshot
Cope’s rule in the evolution of marine animals
inferredcites →https://doi.org/10.1126/science.216.4546.621openalex-snapshot
Skeleton of Diacodexis , Oldest Known Artiodactyl
inferredcites →https://doi.org/10.1146/annurev-genom-082908-150001openalex-snapshot
Biased Gene Conversion and the Evolution of Mammalian Genomic Landscapes
inferredcites →https://doi.org/10.1186/1471-2148-8-255openalex-snapshot
Non-homogeneous models of sequence evolution in the Bio++ suite of libraries and programs
inferredcites →https://doi.org/10.1186/s12862-016-0666-4openalex-snapshot
Molecular evolutionary rates are not correlated with temperature and latitude in Squamata: an exception to the metabolic theory of ecology?
inferredcites →https://doi.org/10.1206/623.1openalex-snapshot
The Eutherian Mammal Maelestes gobiensis from the Late Cretaceous of Mongolia and the phylogeny of cretaceous eutheria
inferredcites →https://doi.org/10.1371/journal.pone.0022594openalex-snapshot
MACSE: Multiple Alignment of Coding SEquences Accounting for Frameshifts and Stop Codons
inferredcites →https://doi.org/10.1371/journal.pone.0032452openalex-snapshot
Impact of Carnivory on Human Development and Evolution Revealed by a New Unifying Model of Weaning in Mammals
inferredcites →https://doi.org/10.1371/journal.pone.0033852openalex-snapshot
Fast and Robust Characterization of Time-Heterogeneous Sequence Evolutionary Processes Using Substitution Mapping
inferredcites →https://doi.org/10.1666/05070.1openalex-snapshot
Fitting and comparing models of phyletic evolution: random walks and beyond
inferredcites →https://doi.org/10.1890/08-1494.1openalex-snapshot
PanTHERIA: a species‐level database of life history, ecology, and geography of extant and recently extinct mammals
inferredcites →https://doi.org/10.5860/choice.191025openalex-snapshot
Mammalogy: adaptation, diversity, ecology
inferredcites →https://doi.org/10.5860/choice.35-5657openalex-snapshot
Classification of mammals: above the species level
inferredcites →https://doi.org/10.5860/choice.45-0862openalex-snapshot
The origins of genome architecture

What points at this work

Incoming claims: where this work appears in other papers’ reference lists and arguments.

inferred← citeshttps://doi.org/10.1016/j.tpb.2021.09.005openalex-snapshot
Quantifying the impact of changes in effective population size and expression level on the rate of coding sequence evolution
inferred← citeshttps://doi.org/10.1093/molbev/msab160openalex-snapshot
Inferring Long-Term Effective Population Size with Mutation–Selection Models
inferred← citeshttps://doi.org/10.1101/2021.05.05.442789openalex-snapshot
Fine-scale quantification of GC-biased gene conversion intensity in mammals
inferred← citeshttps://doi.org/10.1186/s12862-018-1120-6openalex-snapshot
Population size may shape the accumulation of functional mutations following domestication
inferred← citeshttps://doi.org/10.24072/pci.evolbiol.100042openalex-snapshot
Predicting small ancestors using contemporary genomes of large mammals
inferred← citeshttps://doi.org/10.24072/pcjournal.22openalex-snapshot
Fine-scale quantification of GC-biased gene conversion intensity in mammals
inferred← citeshttps://doi.org/10.70675/b13dde82za414z4fe5z8a8fz1e4651c0eb31openalex-snapshot
Modelling the articulation of selective and neutral mechanisms in the evolution of protein-coding DNA sequences
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