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Songbird organotypic culture as an in vitro model for interrogating sparse sequencing networks

https://doi.org/10.1101/164228
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What this work says

Outgoing claims: the papers this work cites, builds on, or argues with.

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Diazepam effect during early neonatal development correlates with neuronal Cl−
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Topographic organization of a forebrain pathway involved with vocal learning in zebra finches
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High vocal center growth and its relation to neurogenesis, neuronal replacement and song acquisition in juvenile canaries
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Development of Signals Influencing the Growth and Termination of Thalamocortical Axons in Organotypic Culture
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Organotypic Hippocampal Slice Cultures as a Model of Limbic Epileptogenesis
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Local Cortical Circuits
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Organotypic monolayer cultures of nervous tissue
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Organotypic culture of the developing cerebral cortex and hypothalamus: Relevance to sexual differentiation
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The Self-Tuning Neuron: Synaptic Scaling of Excitatory Synapses
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Sparse coding of sensory inputs
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A technique for repeated recordings in cortical organotypic slices
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Hippocampal “Time Cells” Bridge the Gap in Memory for Discontiguous Events
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Population-Level Representation of a Temporal Sequence Underlying Song Production in the Zebra Finch
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A Distributed Recurrent Network Contributes to Temporally Precise Vocalizations
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Medial Entorhinal Cortex Selectively Supports Temporal Coding by Hippocampal Neurons
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Modeling nigrostriatal degeneration in organotypic cultures, a new ex vivo model of Parkinson’s disease
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Organotypic brain slice cultures: A review
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A stable brain from unstable components: Emerging concepts and implications for neural computation
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Organotypic hippocampal slice culture from the adult mouse brain: A versatile tool for translational neuropsychopharmacology
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Steady or changing? Long-term monitoring of neuronal population activity
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High-efficiency transfection of individual neurons using modified electrophysiology techniques
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Organotypic slice cultures: a technique has come of age
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Patterns of spontaneous activity and morphology of interneuron types in organotypic cortex and thalamus–cortex cultures
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Activity-dependent scaling of quantal amplitude in neocortical neurons
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Estrogen synthesis in the male brain triggers development of the avian song control pathway in vitro
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An ultra-sparse code underliesthe generation of neural sequences in a songbird
inferredcites →https://doi.org/10.1038/nature09514openalex-snapshot
Support for a synaptic chain model of neuronal sequence generation
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Choice-specific sequences in parietal cortex during a virtual-navigation decision task
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A shared neural ensemble links distinct contextual memories encoded close in time
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Reversible large-scale modification of cortical networks during neuroprosthetic control
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Motor circuits are required to encode a sensory model for imitative learning
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Volitional modulation of optically recorded calcium signals during neuroprosthetic learning
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Technologies for imaging neural activity in large volumes
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History-dependent variability in population dynamics during evidence accumulation in cortex
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Unstable neurons underlie a stable learned behavior
inferredcites →https://doi.org/10.1038/nn.4563openalex-snapshot
Identification of a motor-to-auditory pathway important for vocal learning
inferredcites →https://doi.org/10.1038/nn.4596openalex-snapshot
Reorganization of corticospinal output during motor learning
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Neural reactivations during sleep determine network credit assignment
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Syringe-injectable electronics
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Basal ganglia function, stuttering, sequencing and repair in adult songbirds
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Syringe-injectable mesh electronics integrate seamlessly with minimal chronic immune response in the brain
inferredcites →https://doi.org/10.1073/pnas.91.17.7844openalex-snapshot
Cell death and neuronal recruitment in the high vocal center of adult male canaries are temporally related to changes in song.
inferredcites →https://doi.org/10.1073/pnas.93.15.8040openalex-snapshot
Induction of long-term potentiation is associated with major ultrastructural changes of activated synapses.
inferredcites →https://doi.org/10.1088/1741-2552/aa6806openalex-snapshot
An open source, wireless capable miniature microscope system
inferredcites →https://doi.org/10.1097/00001756-199410000-00015openalex-snapshot
Calcium imaging in organotypic cultures of the rat suprachiasmatic nucleus
inferredcites →https://doi.org/10.1098/rstb.2016.0161openalex-snapshot
Variance and invariance of neuronal long-term representations
inferredcites →https://doi.org/10.1100/tsw.2009.68openalex-snapshot
Organotypic Cultures as a Model of Parkinson´s Disease. A Twist to an Old Model
inferredcites →https://doi.org/10.1100/tsw.2010.82openalex-snapshot
Autophagy Regulates the Post-Translational Cleavage of BCL-2 and Promotes Neuronal Survival
inferredcites →https://doi.org/10.1103/physreve.74.011918openalex-snapshot
Stable propagation of a burst through a one-dimensional homogeneous excitatory chain model of songbird nucleus HVC
inferredcites →https://doi.org/10.1111/j.1460-9568.2008.06106.xopenalex-snapshot
Imbalance between excitation and inhibition among synaptic connections of CA3 pyramidal neurons in cultured hippocampal slices
inferredcites →https://doi.org/10.1126/science.1159775openalex-snapshot
Internally Generated Cell Assembly Sequences in the Rat Hippocampus
inferredcites →https://doi.org/10.1126/science.287.5456.1273openalex-snapshot
Sparse Coding and Decorrelation in Primary Visual Cortex During Natural Vision
inferredcites →https://doi.org/10.1126/science.aad3023openalex-snapshot
Inhibition protects acquired song segments during vocal learning in zebra finches
inferredcites →https://doi.org/10.1152/jn.00952.2006openalex-snapshot
Singing-Related Activity of Identified HVC Neurons in the Zebra Finch
inferredcites →https://doi.org/10.1177/026119290203000304openalex-snapshot
Organotypic Brain-slice Cultures from Adult Rats: Approaches for a Prolonged Culture Time
inferredcites →https://doi.org/10.1371/journal.pbio.1002158openalex-snapshot
Mesoscopic Patterns of Neural Activity Support Songbird Cortical Sequences
inferredcites →https://doi.org/10.1371/journal.pcbi.1004581openalex-snapshot
Neural Sequence Generation Using Spatiotemporal Patterns of Inhibition
inferredcites →https://doi.org/10.1371/journal.pone.0000723openalex-snapshot
Development of Neural Circuitry for Precise Temporal Sequences through Spontaneous Activity, Axon Remodeling, and Synaptic Plasticity
inferredcites →https://doi.org/10.1371/journal.pone.0038173openalex-snapshot
The Song Must Go On: Resilience of the Songbird Vocal Motor Pathway
inferredcites →https://doi.org/10.1371/journal.pone.0045017openalex-snapshot
Organotypic Brain Slice Cultures of Adult Transgenic P301S Mice—A Model for Tauopathy Studies
inferredcites →https://doi.org/10.1371/journal.pone.0058260openalex-snapshot
Membrane Potential Measurements of Isolated Neurons Using a Voltage-Sensitive Dye
inferredcites →https://doi.org/10.1385/jmn:19:3:317openalex-snapshot
Organotypic Slice Cultures from Transgenic Mice as Disease Model Systems
inferredcites →https://doi.org/10.1523/jneurosci.0447-07.2007openalex-snapshot
Development and Plasticity of Spontaneous Activity and Up States in Cortical Organotypic Slices
inferredcites →https://doi.org/10.1523/jneurosci.0603-08.2008openalex-snapshot
Principles of Long-Term Dynamics of Dendritic Spines
inferredcites →https://doi.org/10.1523/jneurosci.16-09-02983.1996openalex-snapshot
The Dynamics of Dendritic Structure in Developing Hippocampal Slices
inferredcites →https://doi.org/10.1523/jneurosci.20-14-05420.2000openalex-snapshot
Different Subthreshold Mechanisms Underlie Song Selectivity in Identified HVc Neurons of the Zebra Finch
inferredcites →https://doi.org/10.1523/jneurosci.4346-14.2015openalex-snapshot
Interplay of Inhibition and Excitation Shapes a Premotor Neural Sequence
inferredcites →https://doi.org/10.3389/fnagi.2015.00047openalex-snapshot
Organotypic vibrosections from whole brain adult Alzheimer mice (overexpressing amyloid-precursor-protein with the Swedish-Dutch-Iowa mutations) as a model to study clearance of beta-amyloid plaques
inferredcites →https://doi.org/10.7554/elife.25421openalex-snapshot
Neural mechanisms of social learning in the female mouse

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inferred← citeshttps://doi.org/10.3389/fnmol.2022.867010openalex-snapshot
A Model of Discovery: The Role of Imaging Established and Emerging Non-mammalian Models in Neuroscience
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