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Enabling rapid cloud-based analysis of thousands of human genomes via Butler

https://doi.org/10.1101/185736
0 signed · 21 inferred · view as graph

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What this work says

Outgoing claims: the papers this work cites, builds on, or argues with.

inferredcites →https://doi.org/10.1002/0471250953.bi1507s52openalex-snapshot
cgpPindel: Identifying Somatically Acquired Insertion and Deletion Events from Paired End Sequencing
inferredcites →https://doi.org/10.1016/j.crvi.2016.05.008openalex-snapshot
Using large-scale genome variation cohorts to decipher the molecular mechanism of cancer
inferredcites →https://doi.org/10.1016/j.future.2014.10.008openalex-snapshot
Pegasus, a workflow management system for science automation
inferredcites →https://doi.org/10.1038/523149aopenalex-snapshot
Data analysis: Create a cloud commons
inferredcites →https://doi.org/10.1038/nature17676openalex-snapshot
Landscape of somatic mutations in 560 breast cancer whole-genome sequences
inferredcites →https://doi.org/10.1038/nbt.3772openalex-snapshot
Toil enables reproducible, open source, big biomedical data analyses
inferredcites →https://doi.org/10.1038/nbt.3820openalex-snapshot
Nextflow enables reproducible computational workflows
inferredcites →https://doi.org/10.1093/bib/bbw020openalex-snapshot
A review of bioinformatic pipeline frameworks
inferredcites →https://doi.org/10.1093/bioinformatics/btp324openalex-snapshot
Fast and accurate short read alignment with Burrows–Wheeler transform
inferredcites →https://doi.org/10.1093/bioinformatics/bts378openalex-snapshot
DELLY: structural variant discovery by integrated paired-end and split-read analysis
inferredcites →https://doi.org/10.1093/nar/gkt328openalex-snapshot
The Taverna workflow suite: designing and executing workflows of Web Services on the desktop, web or in the cloud
inferredcites →https://doi.org/10.1101/161638openalex-snapshot
Large-Scale Uniform Analysis of Cancer Whole Genomes in Multiple Computing Environments
inferredcites →https://doi.org/10.1101/162784openalex-snapshot
Pan-cancer analysis of whole genomes
inferredcites →https://doi.org/10.1101/gr.211656.116openalex-snapshot
GenomeVIP: a cloud platform for genomic variant discovery and interpretation
inferredcites →https://doi.org/10.1186/gb-2010-11-8-r86openalex-snapshot
Galaxy: a comprehensive approach for supporting accessible, reproducible, and transparent computational research in the life sciences
inferredcites →https://doi.org/10.1186/s13073-017-0449-6openalex-snapshot
Computing patient data in the cloud: practical and legal considerations for genetics and genomics research in Europe and internationally
inferredcites →https://doi.org/10.12688/f1000research.5930.2openalex-snapshot
Rampant software errors may undermine scientific results
inferredcites →https://doi.org/10.48550/arxiv.1207.3907openalex-snapshot
Haplotype-based variant detection from short-read sequencing

What points at this work

Incoming claims: where this work appears in other papers’ reference lists and arguments.

inferred← citeshttps://doi.org/10.1038/nrg.2017.113openalex-snapshot
Cloud computing for genomic data analysis and collaboration
inferred← citeshttps://doi.org/10.1038/s41586-020-1969-6openalex-snapshot
Pan-cancer analysis of whole genomes
inferred← citeshttps://doi.org/10.1109/icoias.2019.00023openalex-snapshot
A Bigdata Search Engine Based Cloud Computing Network Architecture in Smart Factory Environment
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