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Capturing the Differences between Humoral Immunity in the Normal and Tumor Environments from Repertoire-Seq of B-Cell Receptors Using Supervised Machine Learning

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What this work says

Outgoing claims: the papers this work cites, builds on, or argues with.

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Statistical analysis of the physical properties of the 20 naturally occurring amino acids

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A multiparameter panel method for outcome prediction following aneurysmal subarachnoid hemorrhage

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Prospective evaluation of biopsy number in the diagnosis of esophageal and gastric carcinoma

inferredcites →https://doi.org/10.1016/j.celrep.2017.07.016openalex-snapshot

Immunogenetic Profiling for Gastric Cancers Identifies Sulfated Glycosaminoglycans as Major and Functional B Cell Antigens in Human Malignancies

inferredcites →https://doi.org/10.1016/j.chom.2013.05.008openalex-snapshot

Convergent Antibody Signatures in Human Dengue

inferredcites →https://doi.org/10.1016/j.cpc.2010.04.018openalex-snapshot

NWChem: A comprehensive and scalable open-source solution for large scale molecular simulations

inferredcites →https://doi.org/10.1038/icb.2015.57openalex-snapshot

BCR repertoire sequencing: different patterns of B‐cell activation after two Meningococcal vaccines

inferredcites →https://doi.org/10.1038/nature22383openalex-snapshot

Quantifiable predictive features define epitope-specific T cell receptor repertoires

inferredcites →https://doi.org/10.1038/nature22976openalex-snapshot

Identifying specificity groups in the T cell receptor repertoire

inferredcites →https://doi.org/10.1038/ng.3822openalex-snapshot

Immunosequencing identifies signatures of cytomegalovirus exposure history and HLA-mediated effects on the T cell repertoire

inferredcites →https://doi.org/10.1038/nmeth.3364openalex-snapshot

MiXCR: software for comprehensive adaptive immunity profiling

inferredcites →https://doi.org/10.1038/nrc3245openalex-snapshot

The immune contexture in human tumours: impact on clinical outcome

inferredcites →https://doi.org/10.1073/pnas.1415875112openalex-snapshot

B-cell repertoire responses to varicella-zoster vaccination in human identical twins

inferredcites →https://doi.org/10.1093/bioinformatics/btu523openalex-snapshot

Tracking global changes induced in the CD4 T-cell receptor repertoire by immunization with a complex antigen using short stretches of CDR3 protein sequence

inferredcites →https://doi.org/10.1101/gr.849004openalex-snapshot

WebLogo: A Sequence Logo Generator: Figure 1

inferredcites →https://doi.org/10.1126/scitranslmed.aaa0072openalex-snapshot

Timely and spatially regulated maturation of B and T cell repertoire during human fetal development

inferredcites →https://doi.org/10.1177/1536867x0900900208openalex-snapshot

The Skillings–Mack Test (Friedman Test when There are Missing Data)

inferredcites →https://doi.org/10.1186/s12859-017-1814-6openalex-snapshot

Statistical classifiers for diagnosing disease from immune repertoires: a case study using multiple sclerosis

inferredcites →https://doi.org/10.1186/s13073-015-0257-9openalex-snapshot

Erratum to: Clinical metagenomic identification of Balamuthia mandrillaris encephalitis and assembly of the draft genome: the continuing case for reference genome sequencing

inferredcites →https://doi.org/10.1371/journal.pone.0089680openalex-snapshot

A Selected Core Microbiome Drives the Early Stages of Three Popular Italian Cheese Manufactures

inferredcites →https://doi.org/10.3346/jkms.2012.27.1.36openalex-snapshot

Optimal Number of Endoscopic Biopsies in Diagnosis of Advanced Gastric and Colorectal Cancer

inferredcites →https://doi.org/10.4049/jimmunol.1301551openalex-snapshot

Integrating B Cell Lineage Information into Statistical Tests for Detecting Selection in Ig Sequences

inferredcites →https://doi.org/10.4049/jimmunol.1401405openalex-snapshot

Identification of Antigen-Specific B Cell Receptor Sequences Using Public Repertoire Analysis

What points at this work

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inferred← citeshttps://doi.org/10.3389/fimmu.2018.00224openalex-snapshot

Computational Strategies for Dissecting the High-Dimensional Complexity of Adaptive Immune Repertoires

Editorial review for independent work. ICSAC — the Institute for Complexity Science and Advanced Computing — runs a structured editorial panel for researchers publishing outside journals, and publishes on CiteStamp rails. Submission is free and goes through ORCID: icsacinstitute.org/submit.